EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000004600 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 15141 bases
Position: chrQEPC01010402.1:242221-257361
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000005952	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006334	ALYREF-201	1296	-	ENSSPUP00000005952	258 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004600	ALYREF	100	80.153	ENSG00000183684	ALYREF	97	82.061	Homo_sapiens
ENSSPUG00000004600	ALYREF	100	66.423	ENSAPOG00000018455	ALYREF	100	69.708	Acanthochromis_polyacanthus
ENSSPUG00000004600	ALYREF	78	83.333	ENSAMEG00000017463	ALYREF	74	91.304	Ailuropoda_melanoleuca
ENSSPUG00000004600	ALYREF	100	77.907	ENSACAG00000010526	ALYREF	100	75.969	Anolis_carolinensis
ENSSPUG00000004600	ALYREF	100	70.229	ENSANAG00000028229	-	78	71.756	Aotus_nancymaae
ENSSPUG00000004600	ALYREF	69	90.395	ENSANAG00000022638	-	75	90.395	Aotus_nancymaae
ENSSPUG00000004600	ALYREF	100	81.298	ENSBTAG00000008498	ALYREF	100	83.206	Bos_taurus
ENSSPUG00000004600	ALYREF	100	80.534	ENSCJAG00000039942	ALYREF	97	82.443	Callithrix_jacchus
ENSSPUG00000004600	ALYREF	100	81.679	ENSCAFG00000005877	ALYREF	100	83.588	Canis_familiaris
ENSSPUG00000004600	ALYREF	100	81.679	ENSCAFG00020009815	ALYREF	100	83.588	Canis_lupus_dingo
ENSSPUG00000004600	ALYREF	100	80.608	ENSCHIG00000017396	ALYREF	97	82.510	Capra_hircus
ENSSPUG00000004600	ALYREF	83	80.374	ENSTSYG00000002272	ALYREF	79	82.439	Carlito_syrichta
ENSSPUG00000004600	ALYREF	52	91.045	ENSCAPG00000014727	-	100	91.045	Cavia_aperea
ENSSPUG00000004600	ALYREF	100	81.679	ENSCPOG00000013710	ALYREF	100	82.443	Cavia_porcellus
ENSSPUG00000004600	ALYREF	100	82.443	ENSCCAG00000020578	-	97	82.443	Cebus_capucinus
ENSSPUG00000004600	ALYREF	100	68.605	ENSCCAG00000030237	-	100	68.605	Cebus_capucinus
ENSSPUG00000004600	ALYREF	100	80.534	ENSCATG00000033169	ALYREF	97	82.443	Cercocebus_atys
ENSSPUG00000004600	ALYREF	100	76.357	ENSCLAG00000015026	ALYREF	100	76.448	Chinchilla_lanigera
ENSSPUG00000004600	ALYREF	100	80.534	ENSCSAG00000002216	ALYREF	97	82.443	Chlorocebus_sabaeus
ENSSPUG00000004600	ALYREF	93	71.369	ENSCANG00000034056	ALYREF	95	81.818	Colobus_angolensis_palliatus
ENSSPUG00000004600	ALYREF	100	80.843	ENSCGRG00001018191	-	100	80.843	Cricetulus_griseus_chok1gshd
ENSSPUG00000004600	ALYREF	74	86.316	ENSCGRG00000015871	-	94	78.974	Cricetulus_griseus_crigri
ENSSPUG00000004600	ALYREF	72	55.385	ENSCSEG00000015438	-	98	55.612	Cynoglossus_semilaevis
ENSSPUG00000004600	ALYREF	69	91.573	ENSDNOG00000002563	ALYREF	84	86.432	Dasypus_novemcinctus
ENSSPUG00000004600	ALYREF	85	79.909	ENSDORG00000025849	-	73	91.061	Dipodomys_ordii
ENSSPUG00000004600	ALYREF	69	93.820	ENSETEG00000016596	ALYREF	100	90.449	Echinops_telfairi
ENSSPUG00000004600	ALYREF	100	80.916	ENSEASG00005005824	ALYREF	95	82.824	Equus_asinus_asinus
ENSSPUG00000004600	ALYREF	100	80.916	ENSECAG00000018754	ALYREF	95	82.824	Equus_caballus
ENSSPUG00000004600	ALYREF	67	76.836	ENSEEUG00000010164	ALYREF	100	78.531	Erinaceus_europaeus
ENSSPUG00000004600	ALYREF	100	81.298	ENSFCAG00000022549	ALYREF	98	83.206	Felis_catus
ENSSPUG00000004600	ALYREF	78	84.236	ENSFDAG00000001213	ALYREF	92	84.236	Fukomys_damarensis
ENSSPUG00000004600	ALYREF	100	84.496	ENSGALG00000007237	ALYREF	100	85.659	Gallus_gallus
ENSSPUG00000004600	ALYREF	100	68.966	ENSGACG00000013328	ALYREF	100	69.349	Gasterosteus_aculeatus
ENSSPUG00000004600	ALYREF	100	88.417	ENSGAGG00000008536	ALYREF	100	91.120	Gopherus_agassizii
ENSSPUG00000004600	ALYREF	100	80.534	ENSGGOG00000013935	ALYREF	99	81.749	Gorilla_gorilla
ENSSPUG00000004600	ALYREF	100	81.992	ENSHGLG00000008293	ALYREF	100	83.142	Heterocephalus_glaber_female
ENSSPUG00000004600	ALYREF	79	77.434	ENSHGLG00100006949	ALYREF	95	78.475	Heterocephalus_glaber_male
ENSSPUG00000004600	ALYREF	100	66.418	ENSHCOG00000015046	ALYREF	100	68.657	Hippocampus_comes
ENSSPUG00000004600	ALYREF	100	82.443	ENSJJAG00000004134	-	100	80.916	Jaculus_jaculus
ENSSPUG00000004600	ALYREF	100	71.863	ENSLACG00000005694	ALYREF	100	75.285	Latimeria_chalumnae
ENSSPUG00000004600	ALYREF	73	92.553	ENSLAFG00000003083	ALYREF	100	92.553	Loxodonta_africana
ENSSPUG00000004600	ALYREF	100	80.620	ENSMFAG00000001394	ALYREF	97	80.620	Macaca_fascicularis
ENSSPUG00000004600	ALYREF	100	80.534	ENSMMUG00000012884	ALYREF	97	82.443	Macaca_mulatta
ENSSPUG00000004600	ALYREF	100	80.534	ENSMNEG00000043666	ALYREF	97	82.443	Macaca_nemestrina
ENSSPUG00000004600	ALYREF	72	81.053	ENSMLEG00000043353	ALYREF	87	81.579	Mandrillus_leucophaeus
ENSSPUG00000004600	ALYREF	100	75.969	ENSMAUG00000020552	-	100	74.806	Mesocricetus_auratus
ENSSPUG00000004600	ALYREF	100	80.153	ENSMICG00000017403	ALYREF	97	82.061	Microcebus_murinus
ENSSPUG00000004600	ALYREF	100	78.927	ENSMOCG00000016792	-	100	75.465	Microtus_ochrogaster
ENSSPUG00000004600	ALYREF	99	81.226	ENSMODG00000003030	ALYREF	84	82.375	Monodelphis_domestica
ENSSPUG00000004600	ALYREF	100	68.266	ENSMALG00000019408	ALYREF	100	69.373	Monopterus_albus
ENSSPUG00000004600	ALYREF	100	70.543	MGP_CAROLIEiJ_G0014874	Alyref2	100	68.217	Mus_caroli
ENSSPUG00000004600	ALYREF	100	81.609	MGP_CAROLIEiJ_G0017529	Alyref	100	82.759	Mus_caroli
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000095022	Gm20765	100	52.982	Mus_musculus
ENSSPUG00000004600	ALYREF	100	81.609	ENSMUSG00000025134	Alyref	100	82.759	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.176	ENSMUSG00000086727	4931428L18Rik	100	54.340	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.712	ENSMUSG00000094314	Gm4301	62	62.871	Mus_musculus
ENSSPUG00000004600	ALYREF	100	69.380	ENSMUSG00000060244	Alyref2	100	67.829	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000097550	Gm21304	100	52.982	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000097878	Gm8764	98	59.880	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000091779	Gm21293	100	52.982	Mus_musculus
ENSSPUG00000004600	ALYREF	100	58.801	ENSMUSG00000117091	AC153137.1	100	53.962	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.553	ENSMUSG00000112931	Gm4303	62	63.861	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.553	ENSMUSG00000112856	Gm4305	62	63.861	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000094144	Gm21312	100	52.982	Mus_musculus
ENSSPUG00000004600	ALYREF	100	59.091	ENSMUSG00000097427	Gm6763	98	59.880	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.553	ENSMUSG00000096744	Gm4307	62	63.861	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.712	ENSMUSG00000096640	Gm4312	62	62.871	Mus_musculus
ENSSPUG00000004600	ALYREF	91	62.712	ENSMUSG00000091101	Gm4302	61	63.861	Mus_musculus
ENSSPUG00000004600	ALYREF	100	58.276	ENSMUSG00000090854	Gm4340	100	51.211	Mus_musculus
ENSSPUG00000004600	ALYREF	100	81.609	MGP_PahariEiJ_G0018655	-	100	82.759	Mus_pahari
ENSSPUG00000004600	ALYREF	74	80.311	MGP_PahariEiJ_G0018656	-	99	81.865	Mus_pahari
ENSSPUG00000004600	ALYREF	83	65.258	MGP_PahariEiJ_G0027255	-	79	64.356	Mus_pahari
ENSSPUG00000004600	ALYREF	83	65.258	MGP_PahariEiJ_G0027254	-	81	64.356	Mus_pahari
ENSSPUG00000004600	ALYREF	100	81.609	MGP_SPRETEiJ_G0018373	Alyref	100	82.759	Mus_spretus
ENSSPUG00000004600	ALYREF	69	55.947	MGP_SPRETEiJ_G0016590	-	54	76.230	Mus_spretus
ENSSPUG00000004600	ALYREF	100	68.992	MGP_SPRETEiJ_G0015679	Alyref2	100	67.442	Mus_spretus
ENSSPUG00000004600	ALYREF	98	60.079	ENSMLUG00000024447	-	76	58.893	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	58.984	ENSMLUG00000030407	-	77	58.984	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	54.789	ENSMLUG00000024471	-	82	53.257	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	60.870	ENSMLUG00000027352	-	77	60.079	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	62.302	ENSMLUG00000026271	-	79	60.317	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	62.500	ENSMLUG00000025677	-	77	61.328	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	73	88.830	ENSMLUG00000009555	-	68	87.766	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	60.079	ENSMLUG00000024976	-	67	67.677	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	56.809	ENSMLUG00000022869	-	70	63.861	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	100	50.370	ENSMLUG00000023213	-	100	49.259	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	54.440	ENSMLUG00000015043	-	98	52.896	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	62.257	ENSMLUG00000002626	-	98	61.868	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	74	63.452	ENSMLUG00000028343	-	91	60.406	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	98	64.822	ENSMLUG00000027516	-	78	65.613	Myotis_lucifugus
ENSSPUG00000004600	ALYREF	100	80.534	ENSNLEG00000010313	ALYREF	97	82.443	Nomascus_leucogenys
ENSSPUG00000004600	ALYREF	79	68.599	ENSMEUG00000002210	ALYREF	90	69.565	Notamacropus_eugenii
ENSSPUG00000004600	ALYREF	52	87.313	ENSOPRG00000005551	-	52	88.060	Ochotona_princeps
ENSSPUG00000004600	ALYREF	100	79.623	ENSODEG00000008359	ALYREF	100	81.509	Octodon_degus
ENSSPUG00000004600	ALYREF	100	68.266	ENSORLG00000012331	ALYREF	100	68.519	Oryzias_latipes
ENSSPUG00000004600	ALYREF	69	91.667	ENSOGAG00000012409	ALYREF	76	90.000	Otolemur_garnettii
ENSSPUG00000004600	ALYREF	69	93.258	ENSOARG00000017932	ALYREF	67	93.258	Ovis_aries
ENSSPUG00000004600	ALYREF	100	81.298	ENSPPRG00000010829	ALYREF	98	83.206	Panthera_pardus
ENSSPUG00000004600	ALYREF	100	80.534	ENSPTRG00000009774	ALYREF	97	82.443	Pan_troglodytes
ENSSPUG00000004600	ALYREF	100	80.534	ENSPANG00000019265	ALYREF	97	82.443	Papio_anubis
ENSSPUG00000004600	ALYREF	51	90.226	ENSPSIG00000017541	ALYREF	98	93.985	Pelodiscus_sinensis
ENSSPUG00000004600	ALYREF	100	80.534	ENSPPYG00000008749	ALYREF	97	82.443	Pongo_abelii
ENSSPUG00000004600	ALYREF	100	80.153	ENSPCOG00000020874	ALYREF	97	82.061	Propithecus_coquereli
ENSSPUG00000004600	ALYREF	100	73.643	ENSPVAG00000017866	ALYREF	69	90.449	Pteropus_vampyrus
ENSSPUG00000004600	ALYREF	67	76.966	ENSRNOG00000036687	Alyref	91	80.226	Rattus_norvegicus
ENSSPUG00000004600	ALYREF	70	88.950	ENSRBIG00000039651	ALYREF	74	88.950	Rhinopithecus_bieti
ENSSPUG00000004600	ALYREF	79	86.538	ENSRROG00000045364	ALYREF	82	88.942	Rhinopithecus_roxellana
ENSSPUG00000004600	ALYREF	74	88.947	ENSSHAG00000010459	ALYREF	98	88.947	Sarcophilus_harrisii
ENSSPUG00000004600	ALYREF	100	52.688	ENSSDUG00000003992	-	100	52.688	Seriola_dumerili
ENSSPUG00000004600	ALYREF	100	52.899	ENSSLDG00000005386	-	100	53.261	Seriola_lalandi_dorsalis
ENSSPUG00000004600	ALYREF	100	68.000	ENSSPAG00000011178	ALYREF	97	67.273	Stegastes_partitus
ENSSPUG00000004600	ALYREF	100	82.375	ENSSSCG00000032655	ALYREF	100	83.525	Sus_scrofa
ENSSPUG00000004600	ALYREF	51	93.182	ENSTGUG00000003513	ALYREF	100	91.111	Taeniopygia_guttata
ENSSPUG00000004600	ALYREF	100	70.260	ENSTRUG00000008828	ALYREF	100	70.037	Takifugu_rubripes
ENSSPUG00000004600	ALYREF	69	92.697	ENSTBEG00000005834	ALYREF	100	92.697	Tupaia_belangeri
ENSSPUG00000004600	ALYREF	100	79.771	ENSTTRG00000012275	ALYREF	100	81.679	Tursiops_truncatus
ENSSPUG00000004600	ALYREF	69	80.791	ENSUAMG00000016931	ALYREF	66	81.356	Ursus_americanus
ENSSPUG00000004600	ALYREF	69	80.791	ENSUMAG00000016384	ALYREF	65	81.356	Ursus_maritimus
ENSSPUG00000004600	ALYREF	100	78.244	ENSXETG00000005391	alyref	100	76.628	Xenopus_tropicalis