EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000004627 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 17084 bases
Position: chrQEPC01002328.1:2159659-2176742
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006097	CAF1	PF04857.20	2e-62	1	1
ENSSPUP00000006117	CAF1	PF04857.20	2.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006511	PNLDC1-202	811	-	ENSSPUP00000006117	224 (aa)	-	-
ENSSPUT00000006488	PNLDC1-201	921	-	ENSSPUP00000006097	306 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004627	PNLDC1	99	66.071	ENSG00000146453	PNLDC1	55	65.398	Homo_sapiens
ENSSPUG00000004627	PNLDC1	99	67.857	ENSAMEG00000015371	PNLDC1	54	67.483	Ailuropoda_melanoleuca
ENSSPUG00000004627	PNLDC1	91	30.603	ENSAPEG00000010661	parn	50	30.627	Amphiprion_percula
ENSSPUG00000004627	PNLDC1	99	62.667	ENSAPLG00000007014	PNLDC1	54	66.549	Anas_platyrhynchos
ENSSPUG00000004627	PNLDC1	99	71.171	ENSACAG00000013667	PNLDC1	53	71.277	Anolis_carolinensis
ENSSPUG00000004627	PNLDC1	99	64.732	ENSANAG00000034713	PNLDC1	56	65.052	Aotus_nancymaae
ENSSPUG00000004627	PNLDC1	99	67.857	ENSBTAG00000015166	PNLDC1	54	68.182	Bos_taurus
ENSSPUG00000004627	PNLDC1	99	64.286	ENSCJAG00000011865	PNLDC1	57	65.052	Callithrix_jacchus
ENSSPUG00000004627	PNLDC1	99	68.304	ENSCAFG00000000740	PNLDC1	54	68.182	Canis_familiaris
ENSSPUG00000004627	PNLDC1	99	68.304	ENSCAFG00020017742	PNLDC1	87	67.577	Canis_lupus_dingo
ENSSPUG00000004627	PNLDC1	99	67.857	ENSCHIG00000003141	PNLDC1	54	67.832	Capra_hircus
ENSSPUG00000004627	PNLDC1	99	64.732	ENSTSYG00000005606	PNLDC1	54	64.706	Carlito_syrichta
ENSSPUG00000004627	PNLDC1	100	56.828	ENSCPOG00000019565	PNLDC1	50	62.791	Cavia_porcellus
ENSSPUG00000004627	PNLDC1	99	64.286	ENSCCAG00000026232	PNLDC1	54	64.706	Cebus_capucinus
ENSSPUG00000004627	PNLDC1	99	66.071	ENSCATG00000033196	PNLDC1	54	65.398	Cercocebus_atys
ENSSPUG00000004627	PNLDC1	100	65.929	ENSCLAG00000003228	PNLDC1	54	65.734	Chinchilla_lanigera
ENSSPUG00000004627	PNLDC1	99	65.625	ENSCSAG00000012478	PNLDC1	55	65.052	Chlorocebus_sabaeus
ENSSPUG00000004627	PNLDC1	100	81.696	ENSCPBG00000004050	PNLDC1	56	83.688	Chrysemys_picta_bellii
ENSSPUG00000004627	PNLDC1	99	66.518	ENSCANG00000043076	PNLDC1	55	66.090	Colobus_angolensis_palliatus
ENSSPUG00000004627	PNLDC1	99	63.839	ENSCGRG00001007470	-	54	64.685	Cricetulus_griseus_chok1gshd
ENSSPUG00000004627	PNLDC1	99	48.430	ENSCGRG00001011981	-	52	52.797	Cricetulus_griseus_chok1gshd
ENSSPUG00000004627	PNLDC1	99	63.839	ENSCGRG00000010221	-	54	64.685	Cricetulus_griseus_crigri
ENSSPUG00000004627	PNLDC1	99	51.570	ENSCGRG00000003103	-	53	55.245	Cricetulus_griseus_crigri
ENSSPUG00000004627	PNLDC1	99	64.889	ENSDNOG00000013709	PNLDC1	54	65.854	Dasypus_novemcinctus
ENSSPUG00000004627	PNLDC1	95	65.888	ENSDORG00000011517	Pnldc1	91	64.561	Dipodomys_ordii
ENSSPUG00000004627	PNLDC1	99	56.250	ENSETEG00000007587	PNLDC1	52	64.981	Echinops_telfairi
ENSSPUG00000004627	PNLDC1	96	31.651	ENSEBUG00000008118	PNLDC1	52	32.601	Eptatretus_burgeri
ENSSPUG00000004627	PNLDC1	95	67.757	ENSEASG00005019029	PNLDC1	55	67.944	Equus_asinus_asinus
ENSSPUG00000004627	PNLDC1	99	67.411	ENSECAG00000012898	PNLDC1	54	67.832	Equus_caballus
ENSSPUG00000004627	PNLDC1	95	63.380	ENSEEUG00000005717	-	53	64.253	Erinaceus_europaeus
ENSSPUG00000004627	PNLDC1	99	66.518	ENSFCAG00000002848	PNLDC1	54	67.133	Felis_catus
ENSSPUG00000004627	PNLDC1	99	62.667	ENSFALG00000012081	PNLDC1	56	65.493	Ficedula_albicollis
ENSSPUG00000004627	PNLDC1	99	64.732	ENSFDAG00000021334	PNLDC1	54	64.336	Fukomys_damarensis
ENSSPUG00000004627	PNLDC1	99	62.780	ENSGALG00000011624	PNLDC1	55	65.957	Gallus_gallus
ENSSPUG00000004627	PNLDC1	100	81.250	ENSGAGG00000015276	PNLDC1	59	83.333	Gopherus_agassizii
ENSSPUG00000004627	PNLDC1	99	65.625	ENSGGOG00000014077	PNLDC1	54	65.052	Gorilla_gorilla
ENSSPUG00000004627	PNLDC1	100	65.487	ENSHGLG00000006889	PNLDC1	54	65.035	Heterocephalus_glaber_female
ENSSPUG00000004627	PNLDC1	100	65.487	ENSHGLG00100018275	PNLDC1	54	65.035	Heterocephalus_glaber_male
ENSSPUG00000004627	PNLDC1	91	31.416	ENSHCOG00000008683	parn	51	31.104	Hippocampus_comes
ENSSPUG00000004627	PNLDC1	99	67.411	ENSSTOG00000005595	PNLDC1	54	67.483	Ictidomys_tridecemlineatus
ENSSPUG00000004627	PNLDC1	100	54.867	ENSJJAG00000009937	Pnldc1	50	63.462	Jaculus_jaculus
ENSSPUG00000004627	PNLDC1	96	64.815	ENSLAFG00000030189	PNLDC1	84	65.734	Loxodonta_africana
ENSSPUG00000004627	PNLDC1	99	66.071	ENSMFAG00000041296	PNLDC1	79	60.684	Macaca_fascicularis
ENSSPUG00000004627	PNLDC1	99	66.071	ENSMMUG00000004181	PNLDC1	77	61.966	Macaca_mulatta
ENSSPUG00000004627	PNLDC1	99	66.071	ENSMNEG00000034271	PNLDC1	79	61.966	Macaca_nemestrina
ENSSPUG00000004627	PNLDC1	99	66.071	ENSMLEG00000044059	PNLDC1	56	65.052	Mandrillus_leucophaeus
ENSSPUG00000004627	PNLDC1	100	65.179	ENSMGAG00000012470	PNLDC1	60	63.141	Meleagris_gallopavo
ENSSPUG00000004627	PNLDC1	93	54.355	ENSMAUG00000012298	Pnldc1	52	54.355	Mesocricetus_auratus
ENSSPUG00000004627	PNLDC1	99	64.732	ENSMICG00000008021	PNLDC1	54	65.035	Microcebus_murinus
ENSSPUG00000004627	PNLDC1	99	65.625	ENSMOCG00000014287	Pnldc1	53	66.084	Microtus_ochrogaster
ENSSPUG00000004627	PNLDC1	100	69.469	ENSMODG00000007420	PNLDC1	53	70.280	Monodelphis_domestica
ENSSPUG00000004627	PNLDC1	89	30.492	ENSMALG00000019426	parn	50	30.492	Monopterus_albus
ENSSPUG00000004627	PNLDC1	99	64.732	MGP_CAROLIEiJ_G0021045	Pnldc1	54	66.084	Mus_caroli
ENSSPUG00000004627	PNLDC1	100	64.602	ENSMUSG00000073460	Pnldc1	90	65.734	Mus_musculus
ENSSPUG00000004627	PNLDC1	99	65.179	MGP_PahariEiJ_G0023361	Pnldc1	54	66.084	Mus_pahari
ENSSPUG00000004627	PNLDC1	99	64.732	MGP_SPRETEiJ_G0021975	Pnldc1	54	65.734	Mus_spretus
ENSSPUG00000004627	PNLDC1	99	68.304	ENSMPUG00000004920	PNLDC1	54	67.832	Mustela_putorius_furo
ENSSPUG00000004627	PNLDC1	84	30.662	ENSMLUG00000005414	PARN	57	30.662	Myotis_lucifugus
ENSSPUG00000004627	PNLDC1	99	66.964	ENSMLUG00000000747	PNLDC1	54	67.133	Myotis_lucifugus
ENSSPUG00000004627	PNLDC1	99	65.625	ENSNGAG00000017714	Pnldc1	54	66.783	Nannospalax_galili
ENSSPUG00000004627	PNLDC1	99	65.179	ENSNLEG00000011282	PNLDC1	55	64.706	Nomascus_leucogenys
ENSSPUG00000004627	PNLDC1	100	53.097	ENSMEUG00000014042	-	80	54.545	Notamacropus_eugenii
ENSSPUG00000004627	PNLDC1	100	64.602	ENSODEG00000008047	PNLDC1	54	64.685	Octodon_degus
ENSSPUG00000004627	PNLDC1	100	61.778	ENSOANG00000012199	PNLDC1	57	61.806	Ornithorhynchus_anatinus
ENSSPUG00000004627	PNLDC1	99	66.518	ENSOCUG00000013867	PNLDC1	54	66.434	Oryctolagus_cuniculus
ENSSPUG00000004627	PNLDC1	99	66.071	ENSOGAG00000007331	PNLDC1	54	66.783	Otolemur_garnettii
ENSSPUG00000004627	PNLDC1	99	67.857	ENSOARG00000004585	PNLDC1	54	67.483	Ovis_aries
ENSSPUG00000004627	PNLDC1	99	65.625	ENSPPAG00000026651	PNLDC1	54	64.706	Pan_paniscus
ENSSPUG00000004627	PNLDC1	99	66.964	ENSPPRG00000012854	PNLDC1	54	67.483	Panthera_pardus
ENSSPUG00000004627	PNLDC1	99	66.964	ENSPTIG00000011501	PNLDC1	55	67.483	Panthera_tigris_altaica
ENSSPUG00000004627	PNLDC1	99	65.625	ENSPTRG00000018762	PNLDC1	55	64.706	Pan_troglodytes
ENSSPUG00000004627	PNLDC1	99	66.071	ENSPANG00000022009	PNLDC1	54	65.398	Papio_anubis
ENSSPUG00000004627	PNLDC1	83	80.392	ENSPSIG00000011419	PNLDC1	86	80.392	Pelodiscus_sinensis
ENSSPUG00000004627	PNLDC1	99	66.518	ENSPEMG00000016301	Pnldc1	54	66.783	Peromyscus_maniculatus_bairdii
ENSSPUG00000004627	PNLDC1	100	69.469	ENSPCIG00000023412	PNLDC1	55	70.661	Phascolarctos_cinereus
ENSSPUG00000004627	PNLDC1	95	66.355	ENSPPYG00000017148	PNLDC1	55	64.261	Pongo_abelii
ENSSPUG00000004627	PNLDC1	99	62.500	ENSPCAG00000014169	PNLDC1	54	64.336	Procavia_capensis
ENSSPUG00000004627	PNLDC1	99	64.732	ENSPCOG00000025722	PNLDC1	54	65.398	Propithecus_coquereli
ENSSPUG00000004627	PNLDC1	99	68.750	ENSPVAG00000005325	PNLDC1	54	68.881	Pteropus_vampyrus
ENSSPUG00000004627	PNLDC1	99	64.732	ENSRNOG00000023140	Pnldc1	100	60.248	Rattus_norvegicus
ENSSPUG00000004627	PNLDC1	99	66.518	ENSRBIG00000033806	PNLDC1	54	66.090	Rhinopithecus_bieti
ENSSPUG00000004627	PNLDC1	99	66.518	ENSRROG00000043919	PNLDC1	55	66.090	Rhinopithecus_roxellana
ENSSPUG00000004627	PNLDC1	99	64.732	ENSSBOG00000019135	PNLDC1	54	65.052	Saimiri_boliviensis_boliviensis
ENSSPUG00000004627	PNLDC1	100	69.912	ENSSHAG00000015192	PNLDC1	55	71.329	Sarcophilus_harrisii
ENSSPUG00000004627	PNLDC1	99	67.857	ENSSSCG00000004046	PNLDC1	56	68.182	Sus_scrofa
ENSSPUG00000004627	PNLDC1	99	62.054	ENSTGUG00000011418	PNLDC1	55	65.169	Taeniopygia_guttata
ENSSPUG00000004627	PNLDC1	99	47.768	ENSTBEG00000009131	PNLDC1	55	51.748	Tupaia_belangeri
ENSSPUG00000004627	PNLDC1	100	67.257	ENSTTRG00000010409	PNLDC1	55	66.667	Tursiops_truncatus
ENSSPUG00000004627	PNLDC1	92	64.115	ENSUAMG00000015783	PNLDC1	53	55.903	Ursus_americanus
ENSSPUG00000004627	PNLDC1	95	67.907	ENSUMAG00000011903	PNLDC1	55	65.141	Ursus_maritimus
ENSSPUG00000004627	PNLDC1	99	68.304	ENSVVUG00000006586	PNLDC1	55	69.630	Vulpes_vulpes