EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000004773 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 19994 bases
Position: chrQEPC01013826.1:574224-594217
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006221	DND1_DSRM	PF14709.7	6.3e-26	1	1
ENSSPUP00000006217	DND1_DSRM	PF14709.7	7.1e-26	1	1
ENSSPUP00000006221	RRM_1	PF00076.22	1.1e-35	1	3
ENSSPUP00000006221	RRM_1	PF00076.22	1.1e-35	2	3
ENSSPUP00000006221	RRM_1	PF00076.22	1.1e-35	3	3
ENSSPUP00000006217	RRM_1	PF00076.22	1.5e-35	1	3
ENSSPUP00000006217	RRM_1	PF00076.22	1.5e-35	2	3
ENSSPUP00000006217	RRM_1	PF00076.22	1.5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006620	-	1548	-	ENSSPUP00000006217	515 (aa)	-	-
ENSSPUT00000006624	-	1440	-	ENSSPUP00000006221	479 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000004773	-	65	71.383	ENSSPUG00000007515	RBM47	60	71.383
ENSSPUG00000004773	-	98	94.055	ENSSPUG00000012525	-	88	94.055
ENSSPUG00000004773	-	62	53.000	ENSSPUG00000010725	SYNCRIP	53	52.333
ENSSPUG00000004773	-	91	72.760	ENSSPUG00000006797	A1CF	84	72.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004773	-	100	89.979	ENSG00000151962	RBM46	100	93.985	Homo_sapiens
ENSSPUG00000004773	-	98	64.198	ENSAPOG00000009209	rbm46	93	64.198	Acanthochromis_polyacanthus
ENSSPUG00000004773	-	97	92.077	ENSAMEG00000013290	RBM46	99	84.440	Ailuropoda_melanoleuca
ENSSPUG00000004773	-	96	61.407	ENSACIG00000014500	rbm46	88	61.472	Amphilophus_citrinellus
ENSSPUG00000004773	-	95	65.570	ENSAOCG00000001892	-	88	65.570	Amphiprion_ocellaris
ENSSPUG00000004773	-	95	65.570	ENSAPEG00000017762	rbm46	99	65.570	Amphiprion_percula
ENSSPUG00000004773	-	95	65.000	ENSATEG00000010775	rbm46	87	64.119	Anabas_testudineus
ENSSPUG00000004773	-	97	86.938	ENSAPLG00000005116	RBM46	100	86.938	Anas_platyrhynchos
ENSSPUG00000004773	-	97	89.722	ENSACAG00000015599	RBM46	98	82.634	Anolis_carolinensis
ENSSPUG00000004773	-	100	89.770	ENSANAG00000029193	RBM46	100	90.776	Aotus_nancymaae
ENSSPUG00000004773	-	94	64.301	ENSACLG00000016153	rbm46	81	64.731	Astatotilapia_calliptera
ENSSPUG00000004773	-	94	66.962	ENSAMXG00000009397	rbm46	98	66.962	Astyanax_mexicanus
ENSSPUG00000004773	-	93	64.069	ENSAMXG00000020892	-	87	64.130	Astyanax_mexicanus
ENSSPUG00000004773	-	99	90.814	ENSBTAG00000001696	RBM46	99	90.814	Bos_taurus
ENSSPUG00000004773	-	98	91.239	ENSCJAG00000001768	RBM46	99	91.239	Callithrix_jacchus
ENSSPUG00000004773	-	99	90.605	ENSCAFG00000008473	RBM46	99	90.605	Canis_familiaris
ENSSPUG00000004773	-	99	91.121	ENSCAFG00020002468	RBM46	96	91.121	Canis_lupus_dingo
ENSSPUG00000004773	-	99	90.397	ENSCHIG00000000502	RBM46	99	90.397	Capra_hircus
ENSSPUG00000004773	-	98	91.667	ENSTSYG00000010435	RBM46	100	91.277	Carlito_syrichta
ENSSPUG00000004773	-	99	89.562	ENSCAPG00000011928	-	99	89.562	Cavia_aperea
ENSSPUG00000004773	-	77	87.738	ENSCAPG00000011841	-	98	87.978	Cavia_aperea
ENSSPUG00000004773	-	98	91.026	ENSCPOG00000010284	-	99	91.026	Cavia_porcellus
ENSSPUG00000004773	-	98	87.633	ENSCPOG00000019272	-	98	80.718	Cavia_porcellus
ENSSPUG00000004773	-	98	87.924	ENSCPOG00000020396	-	98	85.193	Cavia_porcellus
ENSSPUG00000004773	-	98	92.094	ENSCCAG00000027619	-	99	92.094	Cebus_capucinus
ENSSPUG00000004773	-	99	75.365	ENSCCAG00000001323	-	99	76.008	Cebus_capucinus
ENSSPUG00000004773	-	98	91.667	ENSCATG00000040148	RBM46	99	91.667	Cercocebus_atys
ENSSPUG00000004773	-	100	86.902	ENSCLAG00000011886	-	93	86.902	Chinchilla_lanigera
ENSSPUG00000004773	-	98	90.171	ENSCLAG00000005846	-	99	90.171	Chinchilla_lanigera
ENSSPUG00000004773	-	97	91.649	ENSCSAG00000003263	RBM46	98	84.351	Chlorocebus_sabaeus
ENSSPUG00000004773	-	97	91.435	ENSCHOG00000003429	RBM46	98	83.969	Choloepus_hoffmanni
ENSSPUG00000004773	-	93	92.584	ENSCPBG00000009314	RBM46	97	92.584	Chrysemys_picta_bellii
ENSSPUG00000004773	-	98	91.453	ENSCANG00000039065	RBM46	99	91.453	Colobus_angolensis_palliatus
ENSSPUG00000004773	-	98	92.735	ENSCGRG00001016714	Rbm46	99	92.735	Cricetulus_griseus_chok1gshd
ENSSPUG00000004773	-	98	92.735	ENSCGRG00000011738	Rbm46	99	92.735	Cricetulus_griseus_crigri
ENSSPUG00000004773	-	94	56.987	ENSCSEG00000005530	rbm46	96	56.987	Cynoglossus_semilaevis
ENSSPUG00000004773	-	98	62.924	ENSCVAG00000021013	rbm46	97	62.924	Cyprinodon_variegatus
ENSSPUG00000004773	-	94	68.352	ENSDARG00000079452	rbm46	90	67.742	Danio_rerio
ENSSPUG00000004773	-	97	91.863	ENSDNOG00000016195	RBM46	98	84.542	Dasypus_novemcinctus
ENSSPUG00000004773	-	98	91.667	ENSDORG00000006405	Rbm46	99	91.667	Dipodomys_ordii
ENSSPUG00000004773	-	97	92.291	ENSETEG00000014902	RBM46	88	92.291	Echinops_telfairi
ENSSPUG00000004773	-	97	92.077	ENSEASG00005015821	RBM46	98	84.924	Equus_asinus_asinus
ENSSPUG00000004773	-	99	90.605	ENSECAG00000007649	RBM46	99	90.605	Equus_caballus
ENSSPUG00000004773	-	100	86.221	ENSEEUG00000011824	RBM46	98	81.298	Erinaceus_europaeus
ENSSPUG00000004773	-	77	72.207	ENSELUG00000008166	rbm46	95	71.816	Esox_lucius
ENSSPUG00000004773	-	98	92.111	ENSFCAG00000029812	RBM46	99	92.094	Felis_catus
ENSSPUG00000004773	-	98	85.256	ENSFALG00000013157	RBM46	95	83.058	Ficedula_albicollis
ENSSPUG00000004773	-	97	88.437	ENSFDAG00000019281	-	90	86.722	Fukomys_damarensis
ENSSPUG00000004773	-	99	85.565	ENSFDAG00000006445	-	95	85.565	Fukomys_damarensis
ENSSPUG00000004773	-	82	63.452	ENSFHEG00000013257	rbm46	87	63.706	Fundulus_heteroclitus
ENSSPUG00000004773	-	98	78.465	ENSGALG00000009278	RBM46	99	78.465	Gallus_gallus
ENSSPUG00000004773	-	59	81.754	ENSGAFG00000020245	rbm46	67	81.185	Gambusia_affinis
ENSSPUG00000004773	-	97	92.719	ENSGAGG00000002019	RBM46	89	92.719	Gopherus_agassizii
ENSSPUG00000004773	-	98	92.094	ENSGGOG00000001876	RBM46	99	92.094	Gorilla_gorilla
ENSSPUG00000004773	-	93	62.640	ENSHBUG00000009609	rbm46	91	66.667	Haplochromis_burtoni
ENSSPUG00000004773	-	98	74.200	ENSHGLG00000002940	-	100	69.732	Heterocephalus_glaber_female
ENSSPUG00000004773	-	91	88.966	ENSHGLG00000002463	-	99	89.145	Heterocephalus_glaber_female
ENSSPUG00000004773	-	92	76.818	ENSHGLG00000010742	-	86	76.364	Heterocephalus_glaber_female
ENSSPUG00000004773	-	98	70.488	ENSHGLG00100018987	-	92	69.262	Heterocephalus_glaber_male
ENSSPUG00000004773	-	92	76.818	ENSHGLG00100004977	-	86	76.364	Heterocephalus_glaber_male
ENSSPUG00000004773	-	98	89.103	ENSHGLG00100012752	-	99	89.103	Heterocephalus_glaber_male
ENSSPUG00000004773	-	96	50.433	ENSHCOG00000012998	rbm46	93	50.000	Hippocampus_comes
ENSSPUG00000004773	-	98	67.010	ENSIPUG00000024038	rbm46	96	67.427	Ictalurus_punctatus
ENSSPUG00000004773	-	98	92.308	ENSSTOG00000007918	RBM46	99	92.308	Ictidomys_tridecemlineatus
ENSSPUG00000004773	-	98	91.667	ENSJJAG00000003902	Rbm46	100	91.277	Jaculus_jaculus
ENSSPUG00000004773	-	92	67.411	ENSKMAG00000015127	rbm46	83	67.411	Kryptolebias_marmoratus
ENSSPUG00000004773	-	97	87.152	ENSLACG00000002062	RBM46	98	80.381	Latimeria_chalumnae
ENSSPUG00000004773	-	96	74.510	ENSLOCG00000008298	rbm46	97	75.442	Lepisosteus_oculatus
ENSSPUG00000004773	-	98	92.308	ENSLAFG00000015448	RBM46	100	92.308	Loxodonta_africana
ENSSPUG00000004773	-	98	92.094	ENSMFAG00000043485	RBM46	99	92.094	Macaca_fascicularis
ENSSPUG00000004773	-	99	90.605	ENSMMUG00000021147	RBM46	99	90.605	Macaca_mulatta
ENSSPUG00000004773	-	98	92.094	ENSMNEG00000002787	RBM46	99	92.094	Macaca_nemestrina
ENSSPUG00000004773	-	98	91.453	ENSMLEG00000029756	RBM46	99	91.453	Mandrillus_leucophaeus
ENSSPUG00000004773	-	93	66.740	ENSMAMG00000009093	rbm46	89	66.667	Mastacembelus_armatus
ENSSPUG00000004773	-	96	65.161	ENSMZEG00005027849	rbm46	96	63.093	Maylandia_zebra
ENSSPUG00000004773	-	98	78.465	ENSMGAG00000001457	RBM46	99	78.465	Meleagris_gallopavo
ENSSPUG00000004773	-	98	92.521	ENSMAUG00000009911	Rbm46	99	92.521	Mesocricetus_auratus
ENSSPUG00000004773	-	98	92.094	ENSMICG00000042747	RBM46	99	92.094	Microcebus_murinus
ENSSPUG00000004773	-	98	92.521	ENSMOCG00000001188	Rbm46	99	92.521	Microtus_ochrogaster
ENSSPUG00000004773	-	95	62.609	ENSMMOG00000011214	rbm46	92	60.204	Mola_mola
ENSSPUG00000004773	-	99	92.178	ENSMODG00000001302	RBM46	81	92.553	Monodelphis_domestica
ENSSPUG00000004773	-	95	62.227	ENSMALG00000006185	rbm46	97	62.227	Monopterus_albus
ENSSPUG00000004773	-	98	92.735	MGP_CAROLIEiJ_G0025101	Rbm46	99	92.735	Mus_caroli
ENSSPUG00000004773	-	98	92.521	ENSMUSG00000033882	Rbm46	99	92.521	Mus_musculus
ENSSPUG00000004773	-	98	92.735	MGP_PahariEiJ_G0026544	Rbm46	99	92.735	Mus_pahari
ENSSPUG00000004773	-	98	92.308	MGP_SPRETEiJ_G0026043	Rbm46	99	92.308	Mus_spretus
ENSSPUG00000004773	-	99	90.814	ENSMPUG00000005670	RBM46	99	90.814	Mustela_putorius_furo
ENSSPUG00000004773	-	97	92.308	ENSMLUG00000003221	RBM46	98	84.952	Myotis_lucifugus
ENSSPUG00000004773	-	98	91.667	ENSNGAG00000004231	Rbm46	99	91.667	Nannospalax_galili
ENSSPUG00000004773	-	93	66.667	ENSNBRG00000000273	rbm46	86	65.359	Neolamprologus_brichardi
ENSSPUG00000004773	-	98	91.898	ENSNLEG00000006184	RBM46	99	91.880	Nomascus_leucogenys
ENSSPUG00000004773	-	87	93.269	ENSMEUG00000013328	RBM46	99	93.171	Notamacropus_eugenii
ENSSPUG00000004773	-	59	93.286	ENSOPRG00000007136	RBM46	100	94.346	Ochotona_princeps
ENSSPUG00000004773	-	98	89.103	ENSODEG00000000735	-	99	89.103	Octodon_degus
ENSSPUG00000004773	-	99	87.212	ENSODEG00000018002	-	93	87.395	Octodon_degus
ENSSPUG00000004773	-	93	66.519	ENSONIG00000014096	rbm46	96	66.519	Oreochromis_niloticus
ENSSPUG00000004773	-	97	87.179	ENSOANG00000002141	RBM46	96	87.179	Ornithorhynchus_anatinus
ENSSPUG00000004773	-	97	92.291	ENSOCUG00000017859	RBM46	98	84.924	Oryctolagus_cuniculus
ENSSPUG00000004773	-	97	62.313	ENSORLG00000002429	rbm46	92	61.474	Oryzias_latipes
ENSSPUG00000004773	-	96	63.656	ENSORLG00020022154	rbm46	84	63.519	Oryzias_latipes_hni
ENSSPUG00000004773	-	97	63.734	ENSORLG00015020234	rbm46	95	63.291	Oryzias_latipes_hsok
ENSSPUG00000004773	-	93	63.858	ENSOMEG00000022580	rbm46	86	63.858	Oryzias_melastigma
ENSSPUG00000004773	-	97	92.291	ENSOGAG00000005647	RBM46	98	84.924	Otolemur_garnettii
ENSSPUG00000004773	-	99	90.605	ENSOARG00000016406	RBM46	99	90.605	Ovis_aries
ENSSPUG00000004773	-	98	92.094	ENSPPAG00000043236	RBM46	99	92.094	Pan_paniscus
ENSSPUG00000004773	-	98	91.880	ENSPPRG00000009416	RBM46	99	91.880	Panthera_pardus
ENSSPUG00000004773	-	98	91.880	ENSPTIG00000017449	RBM46	99	91.880	Panthera_tigris_altaica
ENSSPUG00000004773	-	98	92.094	ENSPTRG00000016538	RBM46	99	92.094	Pan_troglodytes
ENSSPUG00000004773	-	98	92.094	ENSPANG00000004186	RBM46	99	92.094	Papio_anubis
ENSSPUG00000004773	-	95	71.491	ENSPKIG00000015334	rbm46	79	71.491	Paramormyrops_kingsleyae
ENSSPUG00000004773	-	98	92.964	ENSPSIG00000006429	RBM46	96	92.964	Pelodiscus_sinensis
ENSSPUG00000004773	-	95	63.436	ENSPMGG00000019872	rbm46	93	63.436	Periophthalmus_magnuspinnatus
ENSSPUG00000004773	-	98	92.735	ENSPEMG00000013899	Rbm46	99	92.735	Peromyscus_maniculatus_bairdii
ENSSPUG00000004773	-	99	91.232	ENSPCIG00000029626	RBM46	99	91.232	Phascolarctos_cinereus
ENSSPUG00000004773	-	96	80.205	ENSPFOG00000001079	rbm46	96	79.661	Poecilia_formosa
ENSSPUG00000004773	-	98	64.059	ENSPLAG00000004541	rbm46	83	64.135	Poecilia_latipinna
ENSSPUG00000004773	-	98	64.059	ENSPMEG00000015724	rbm46	93	65.652	Poecilia_mexicana
ENSSPUG00000004773	-	98	64.059	ENSPREG00000014464	rbm46	97	65.870	Poecilia_reticulata
ENSSPUG00000004773	-	97	91.863	ENSPPYG00000015144	RBM46	98	84.542	Pongo_abelii
ENSSPUG00000004773	-	99	85.053	ENSPCAG00000003110	RBM46	90	85.062	Procavia_capensis
ENSSPUG00000004773	-	98	91.453	ENSPCOG00000024347	RBM46	99	91.453	Propithecus_coquereli
ENSSPUG00000004773	-	97	92.291	ENSPVAG00000008376	RBM46	98	84.733	Pteropus_vampyrus
ENSSPUG00000004773	-	94	69.546	ENSPNAG00000025312	rbm46	88	69.546	Pygocentrus_nattereri
ENSSPUG00000004773	-	97	92.719	ENSRNOG00000025823	Rbm46	98	85.305	Rattus_norvegicus
ENSSPUG00000004773	-	99	90.678	ENSRBIG00000032583	RBM46	99	91.667	Rhinopithecus_bieti
ENSSPUG00000004773	-	98	91.453	ENSRROG00000044288	RBM46	99	91.453	Rhinopithecus_roxellana
ENSSPUG00000004773	-	98	91.880	ENSSBOG00000033028	RBM46	100	90.985	Saimiri_boliviensis_boliviensis
ENSSPUG00000004773	-	97	92.934	ENSSHAG00000012596	RBM46	98	85.305	Sarcophilus_harrisii
ENSSPUG00000004773	-	97	71.702	ENSSFOG00015000087	rbm46	97	67.451	Scleropages_formosus
ENSSPUG00000004773	-	98	60.897	ENSSMAG00000017042	rbm46	98	60.638	Scophthalmus_maximus
ENSSPUG00000004773	-	96	66.883	ENSSDUG00000020645	rbm46	90	66.667	Seriola_dumerili
ENSSPUG00000004773	-	97	91.863	ENSSARG00000006520	RBM46	98	84.542	Sorex_araneus
ENSSPUG00000004773	-	95	63.576	ENSSPAG00000013697	rbm46	96	63.181	Stegastes_partitus
ENSSPUG00000004773	-	99	91.004	ENSSSCG00000008994	RBM46	99	91.004	Sus_scrofa
ENSSPUG00000004773	-	97	83.726	ENSTGUG00000005307	RBM46	100	83.726	Taeniopygia_guttata
ENSSPUG00000004773	-	96	63.853	ENSTRUG00000004237	rbm46	93	63.853	Takifugu_rubripes
ENSSPUG00000004773	-	96	61.864	ENSTNIG00000008714	rbm46	90	61.123	Tetraodon_nigroviridis
ENSSPUG00000004773	-	96	90.850	ENSTBEG00000013949	RBM46	97	83.527	Tupaia_belangeri
ENSSPUG00000004773	-	97	91.435	ENSTTRG00000001239	RBM46	99	84.250	Tursiops_truncatus
ENSSPUG00000004773	-	99	90.814	ENSUAMG00000026593	RBM46	99	90.814	Ursus_americanus
ENSSPUG00000004773	-	99	90.605	ENSUMAG00000016442	RBM46	99	90.605	Ursus_maritimus
ENSSPUG00000004773	-	98	92.308	ENSVVUG00000024957	RBM46	99	92.308	Vulpes_vulpes
ENSSPUG00000004773	-	77	72.087	ENSXETG00000032067	-	100	71.545	Xenopus_tropicalis
ENSSPUG00000004773	-	97	76.231	ENSXETG00000022412	-	87	76.231	Xenopus_tropicalis
ENSSPUG00000004773	-	97	56.356	ENSXETG00000032344	-	88	56.356	Xenopus_tropicalis
ENSSPUG00000004773	-	94	64.946	ENSXMAG00000008237	rbm46	91	64.946	Xiphophorus_maculatus