EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000004905 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 47377 bases
Position: chrQEPC01003261.1:2708156-2755532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006349	RNA_pol_Rpb2_7	PF04560.20	2.1e-35	1	1
ENSSPUP00000006349	RNA_pol_Rpb2_6	PF00562.28	5.8e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006761	-	1694	-	ENSSPUP00000006349	343 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000004905	-	94	45.045	ENSSPUG00000018295	POLR2B	66	45.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004905	-	60	81.951	ENSCING00000023381	-	100	81.951	Ciona_intestinalis
ENSSPUG00000004905	-	94	46.319	ENSGAFG00000016488	-	99	46.319	Gambusia_affinis
ENSSPUG00000004905	-	100	87.464	ENSHBUG00000008882	polr3b	100	87.464	Haplochromis_burtoni
ENSSPUG00000004905	-	94	43.544	ENSMICG00000015166	POLR2B	66	43.544	Microcebus_murinus
ENSSPUG00000004905	-	100	93.878	ENSOMEG00000010619	polr3b	100	93.878	Oryzias_melastigma
ENSSPUG00000004905	-	77	34.286	ENSPMGG00000017095	-	74	34.286	Periophthalmus_magnuspinnatus
ENSSPUG00000004905	-	100	95.044	ENSPMGG00000013671	polr3b	100	95.044	Periophthalmus_magnuspinnatus
ENSSPUG00000004905	-	100	89.244	ENSPMAG00000008197	-	71	89.244	Petromyzon_marinus
ENSSPUG00000004905	-	94	37.538	ENSPCOG00000009281	-	73	37.538	Propithecus_coquereli
ENSSPUG00000004905	-	94	45.181	ENSRBIG00000042838	POLR2B	66	45.045	Rhinopithecus_bieti
ENSSPUG00000004905	-	100	93.878	ENSSPAG00000008909	polr3b	100	93.878	Stegastes_partitus
ENSSPUG00000004905	-	94	46.246	ENSSPAG00000019229	-	66	46.246	Stegastes_partitus
ENSSPUG00000004905	-	100	97.668	ENSUAMG00000024267	POLR3B	54	97.668	Ursus_americanus
ENSSPUG00000004905	-	94	44.745	ENSUAMG00000003345	-	75	44.745	Ursus_americanus
ENSSPUG00000004905	-	94	46.012	ENSXCOG00000014654	-	99	46.012	Xiphophorus_couchianus