EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000004967 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 4227 bases
Position: chrQEPC01001898.1:168733-172959
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006442	RRM_1	PF00076.22	7e-32	1	2
ENSSPUP00000006442	RRM_1	PF00076.22	7e-32	2	2
ENSSPUP00000006426	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006857	SRSF6-202	1026	-	ENSSPUP00000006442	341 (aa)	-	-
ENSSPUT00000006840	SRSF6-201	568	-	ENSSPUP00000006426	135 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000004967	SRSF6	50	70.149	ENSSPUG00000002464	SRSF5	88	55.814
ENSSPUG00000004967	SRSF6	64	73.864	ENSSPUG00000019124	-	99	73.864
ENSSPUG00000004967	SRSF6	57	42.995	ENSSPUG00000000804	-	86	43.889
ENSSPUG00000004967	SRSF6	56	34.667	ENSSPUG00000005889	-	50	34.667
ENSSPUG00000004967	SRSF6	50	68.657	ENSSPUG00000002052	-	67	64.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004967	SRSF6	100	97.037	ENSG00000124193	SRSF6	100	97.037	Homo_sapiens
ENSSPUG00000004967	SRSF6	58	93.590	ENSAPOG00000016635	-	84	80.882	Acanthochromis_polyacanthus
ENSSPUG00000004967	SRSF6	94	77.778	ENSAMEG00000003710	SRSF6	53	73.913	Ailuropoda_melanoleuca
ENSSPUG00000004967	SRSF6	88	67.105	ENSACIG00000023658	-	56	88.268	Amphilophus_citrinellus
ENSSPUG00000004967	SRSF6	94	63.438	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSSPUG00000004967	SRSF6	65	82.955	ENSAOCG00000004309	-	57	86.740	Amphiprion_ocellaris
ENSSPUG00000004967	SRSF6	58	93.590	ENSAOCG00000019438	-	98	68.548	Amphiprion_ocellaris
ENSSPUG00000004967	SRSF6	98	59.441	ENSAPEG00000013086	-	53	89.730	Amphiprion_percula
ENSSPUG00000004967	SRSF6	63	83.529	ENSATEG00000007255	-	71	81.421	Anabas_testudineus
ENSSPUG00000004967	SRSF6	94	88.509	ENSACAG00000002061	SRSF6	52	98.343	Anolis_carolinensis
ENSSPUG00000004967	SRSF6	100	97.037	ENSANAG00000024080	SRSF6	100	97.037	Aotus_nancymaae
ENSSPUG00000004967	SRSF6	54	89.041	ENSACLG00000024373	-	96	78.495	Astatotilapia_calliptera
ENSSPUG00000004967	SRSF6	55	91.892	ENSAMXG00000042692	-	96	80.741	Astyanax_mexicanus
ENSSPUG00000004967	SRSF6	100	96.296	ENSBTAG00000008527	SRSF6	100	96.296	Bos_taurus
ENSSPUG00000004967	SRSF6	100	97.037	ENSCJAG00000048403	SRSF6	100	97.037	Callithrix_jacchus
ENSSPUG00000004967	SRSF6	100	96.296	ENSCAFG00000009289	SRSF6	100	96.296	Canis_familiaris
ENSSPUG00000004967	SRSF6	100	96.296	ENSCAFG00020013559	SRSF6	100	96.296	Canis_lupus_dingo
ENSSPUG00000004967	SRSF6	94	86.728	ENSCHIG00000009148	-	53	92.896	Capra_hircus
ENSSPUG00000004967	SRSF6	100	96.296	ENSCHIG00000015890	-	100	96.296	Capra_hircus
ENSSPUG00000004967	SRSF6	100	97.037	ENSCPOG00000011761	SRSF6	100	97.037	Cavia_porcellus
ENSSPUG00000004967	SRSF6	100	97.037	ENSCCAG00000026018	-	100	97.037	Cebus_capucinus
ENSSPUG00000004967	SRSF6	94	64.198	ENSCCAG00000018540	-	60	83.696	Cebus_capucinus
ENSSPUG00000004967	SRSF6	100	97.037	ENSCATG00000030794	SRSF6	100	97.037	Cercocebus_atys
ENSSPUG00000004967	SRSF6	100	97.037	ENSCLAG00000010247	SRSF6	100	97.037	Chinchilla_lanigera
ENSSPUG00000004967	SRSF6	94	87.267	ENSCSAG00000014022	SRSF6	53	95.082	Chlorocebus_sabaeus
ENSSPUG00000004967	SRSF6	67	95.556	ENSCPBG00000018200	SRSF6	100	95.115	Chrysemys_picta_bellii
ENSSPUG00000004967	SRSF6	94	86.957	ENSCANG00000037774	-	53	93.989	Colobus_angolensis_palliatus
ENSSPUG00000004967	SRSF6	100	95.556	ENSCGRG00001022339	Srsf6	100	95.556	Cricetulus_griseus_chok1gshd
ENSSPUG00000004967	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	82.400	Cynoglossus_semilaevis
ENSSPUG00000004967	SRSF6	58	91.026	ENSCVAG00000001863	SRSF6	95	86.400	Cyprinodon_variegatus
ENSSPUG00000004967	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	85	90.123	Danio_rerio
ENSSPUG00000004967	SRSF6	94	87.963	ENSDNOG00000008410	SRSF6	53	95.082	Dasypus_novemcinctus
ENSSPUG00000004967	SRSF6	100	97.037	ENSDORG00000028378	Srsf6	100	97.037	Dipodomys_ordii
ENSSPUG00000004967	SRSF6	93	87.461	ENSETEG00000006221	SRSF6	53	90.659	Echinops_telfairi
ENSSPUG00000004967	SRSF6	94	69.659	ENSEASG00005023429	SRSF6	53	93.989	Equus_asinus_asinus
ENSSPUG00000004967	SRSF6	94	69.659	ENSECAG00000023932	SRSF6	56	93.989	Equus_caballus
ENSSPUG00000004967	SRSF6	98	60.714	ENSELUG00000024182	SRSF6	90	79.675	Esox_lucius
ENSSPUG00000004967	SRSF6	59	88.750	ENSELUG00000013506	SRSF6	72	87.654	Esox_lucius
ENSSPUG00000004967	SRSF6	94	88.235	ENSFCAG00000032814	SRSF6	53	93.989	Felis_catus
ENSSPUG00000004967	SRSF6	89	69.481	ENSFHEG00000023065	srsf6a	54	87.912	Fundulus_heteroclitus
ENSSPUG00000004967	SRSF6	61	78.313	ENSGMOG00000006105	srsf6a	62	73.446	Gadus_morhua
ENSSPUG00000004967	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	51	80.526	Gadus_morhua
ENSSPUG00000004967	SRSF6	100	100.000	ENSGALG00000000990	SRSF6	100	100.000	Gallus_gallus
ENSSPUG00000004967	SRSF6	58	94.872	ENSGAFG00000019088	-	72	83.200	Gambusia_affinis
ENSSPUG00000004967	SRSF6	98	61.940	ENSGACG00000006084	srsf6a	53	84.865	Gasterosteus_aculeatus
ENSSPUG00000004967	SRSF6	67	95.556	ENSGAGG00000003238	SRSF6	100	95.115	Gopherus_agassizii
ENSSPUG00000004967	SRSF6	100	97.037	ENSGGOG00000009808	SRSF6	100	97.037	Gorilla_gorilla
ENSSPUG00000004967	SRSF6	56	89.474	ENSHBUG00000006386	-	57	87.293	Haplochromis_burtoni
ENSSPUG00000004967	SRSF6	88	75.415	ENSHGLG00000007701	-	57	73.481	Heterocephalus_glaber_female
ENSSPUG00000004967	SRSF6	100	97.037	ENSHGLG00000007348	SRSF6	100	97.037	Heterocephalus_glaber_female
ENSSPUG00000004967	SRSF6	58	92.308	ENSHCOG00000002740	srsf6a	57	86.188	Hippocampus_comes
ENSSPUG00000004967	SRSF6	58	92.308	ENSIPUG00000004776	-	71	79.524	Ictalurus_punctatus
ENSSPUG00000004967	SRSF6	100	97.037	ENSSTOG00000010866	SRSF6	100	97.037	Ictidomys_tridecemlineatus
ENSSPUG00000004967	SRSF6	89	68.092	ENSKMAG00000011934	srsf6a	59	87.845	Kryptolebias_marmoratus
ENSSPUG00000004967	SRSF6	58	94.872	ENSLBEG00000007356	srsf6a	51	86.957	Labrus_bergylta
ENSSPUG00000004967	SRSF6	93	81.677	ENSLACG00000005466	SRSF6	54	91.803	Latimeria_chalumnae
ENSSPUG00000004967	SRSF6	100	97.037	ENSMFAG00000036925	SRSF6	100	97.037	Macaca_fascicularis
ENSSPUG00000004967	SRSF6	100	97.037	ENSMMUG00000006742	SRSF6	100	97.037	Macaca_mulatta
ENSSPUG00000004967	SRSF6	93	86.250	ENSMNEG00000038270	-	53	93.989	Macaca_nemestrina
ENSSPUG00000004967	SRSF6	100	95.556	ENSMNEG00000027392	-	100	95.556	Macaca_nemestrina
ENSSPUG00000004967	SRSF6	98	59.441	ENSMAMG00000017161	srsf6a	53	89.189	Mastacembelus_armatus
ENSSPUG00000004967	SRSF6	63	85.882	ENSMAMG00000023477	-	89	85.882	Mastacembelus_armatus
ENSSPUG00000004967	SRSF6	98	59.091	ENSMZEG00005020658	-	60	84.916	Maylandia_zebra
ENSSPUG00000004967	SRSF6	56	89.474	ENSMZEG00005008032	-	57	87.293	Maylandia_zebra
ENSSPUG00000004967	SRSF6	100	95.556	ENSMAUG00000019086	-	100	95.556	Mesocricetus_auratus
ENSSPUG00000004967	SRSF6	100	97.037	ENSMICG00000008537	SRSF6	100	97.037	Microcebus_murinus
ENSSPUG00000004967	SRSF6	58	94.872	ENSMMOG00000015241	-	76	93.827	Mola_mola
ENSSPUG00000004967	SRSF6	58	100.000	ENSMODG00000003107	SRSF6	100	80.814	Monodelphis_domestica
ENSSPUG00000004967	SRSF6	100	95.556	MGP_CAROLIEiJ_G0024606	Srsf6	100	95.556	Mus_caroli
ENSSPUG00000004967	SRSF6	100	95.556	ENSMUSG00000016921	Srsf6	100	95.556	Mus_musculus
ENSSPUG00000004967	SRSF6	100	95.556	MGP_PahariEiJ_G0026050	Srsf6	100	95.556	Mus_pahari
ENSSPUG00000004967	SRSF6	100	95.556	MGP_SPRETEiJ_G0025528	Srsf6	100	95.556	Mus_spretus
ENSSPUG00000004967	SRSF6	58	96.154	ENSMPUG00000017692	SRSF6	64	93.989	Mustela_putorius_furo
ENSSPUG00000004967	SRSF6	93	70.605	ENSMLUG00000016618	SRSF6	53	62.802	Myotis_lucifugus
ENSSPUG00000004967	SRSF6	100	97.037	ENSNGAG00000017560	Srsf6	100	97.037	Nannospalax_galili
ENSSPUG00000004967	SRSF6	98	59.441	ENSNBRG00000001846	-	52	89.189	Neolamprologus_brichardi
ENSSPUG00000004967	SRSF6	56	89.474	ENSNBRG00000014709	-	57	87.293	Neolamprologus_brichardi
ENSSPUG00000004967	SRSF6	100	97.037	ENSNLEG00000006524	SRSF6	100	97.037	Nomascus_leucogenys
ENSSPUG00000004967	SRSF6	58	100.000	ENSMEUG00000014615	SRSF6	61	95.652	Notamacropus_eugenii
ENSSPUG00000004967	SRSF6	100	97.037	ENSODEG00000016510	-	100	97.037	Octodon_degus
ENSSPUG00000004967	SRSF6	61	86.585	ENSONIG00000020247	-	53	84.530	Oreochromis_niloticus
ENSSPUG00000004967	SRSF6	74	54.762	ENSOCUG00000023999	-	70	54.749	Oryctolagus_cuniculus
ENSSPUG00000004967	SRSF6	98	41.216	ENSOCUG00000009785	-	63	72.487	Oryctolagus_cuniculus
ENSSPUG00000004967	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	73.203	Oryzias_latipes_hni
ENSSPUG00000004967	SRSF6	58	97.436	ENSOGAG00000014468	SRSF6	53	94.536	Otolemur_garnettii
ENSSPUG00000004967	SRSF6	93	85.981	ENSOARG00000003117	SRSF6	53	89.011	Ovis_aries
ENSSPUG00000004967	SRSF6	94	86.997	ENSPPAG00000034327	-	53	94.536	Pan_paniscus
ENSSPUG00000004967	SRSF6	90	79.739	ENSPPAG00000043131	-	57	80.663	Pan_paniscus
ENSSPUG00000004967	SRSF6	94	88.235	ENSPPRG00000008917	SRSF6	53	93.989	Panthera_pardus
ENSSPUG00000004967	SRSF6	100	97.037	ENSPTRG00000044686	-	100	97.037	Pan_troglodytes
ENSSPUG00000004967	SRSF6	90	79.739	ENSPTRG00000046274	-	57	80.663	Pan_troglodytes
ENSSPUG00000004967	SRSF6	100	97.037	ENSPANG00000035224	SRSF6	100	97.037	Papio_anubis
ENSSPUG00000004967	SRSF6	84	76.812	ENSPKIG00000015703	-	95	63.265	Paramormyrops_kingsleyae
ENSSPUG00000004967	SRSF6	100	69.540	ENSPKIG00000018463	-	83	91.667	Paramormyrops_kingsleyae
ENSSPUG00000004967	SRSF6	58	96.154	ENSPKIG00000015603	-	88	88.000	Paramormyrops_kingsleyae
ENSSPUG00000004967	SRSF6	89	71.290	ENSPMGG00000014963	srsf6a	55	89.071	Periophthalmus_magnuspinnatus
ENSSPUG00000004967	SRSF6	85	85.345	ENSPEMG00000022405	-	96	85.345	Peromyscus_maniculatus_bairdii
ENSSPUG00000004967	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSSPUG00000004967	SRSF6	58	94.872	ENSPFOG00000006437	srsf6a	50	85.714	Poecilia_formosa
ENSSPUG00000004967	SRSF6	89	65.846	ENSPLAG00000009243	srsf6a	80	81.890	Poecilia_latipinna
ENSSPUG00000004967	SRSF6	58	94.872	ENSPMEG00000006042	SRSF6	53	87.500	Poecilia_mexicana
ENSSPUG00000004967	SRSF6	58	94.872	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSSPUG00000004967	SRSF6	94	87.307	ENSPPYG00000011019	SRSF6	53	95.082	Pongo_abelii
ENSSPUG00000004967	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	55	94.536	Procavia_capensis
ENSSPUG00000004967	SRSF6	100	97.037	ENSPCOG00000026364	SRSF6	100	97.037	Propithecus_coquereli
ENSSPUG00000004967	SRSF6	94	87.267	ENSPVAG00000015232	SRSF6	53	95.055	Pteropus_vampyrus
ENSSPUG00000004967	SRSF6	98	59.441	ENSPNYG00000011272	-	51	89.189	Pundamilia_nyererei
ENSSPUG00000004967	SRSF6	56	89.474	ENSPNYG00000004944	-	57	87.293	Pundamilia_nyererei
ENSSPUG00000004967	SRSF6	60	93.827	ENSPNAG00000023179	-	94	86.400	Pygocentrus_nattereri
ENSSPUG00000004967	SRSF6	94	86.335	ENSRNOG00000006380	Srsf6	54	93.989	Rattus_norvegicus
ENSSPUG00000004967	SRSF6	100	94.074	ENSRBIG00000041414	SRSF6	100	94.074	Rhinopithecus_bieti
ENSSPUG00000004967	SRSF6	100	97.037	ENSRROG00000029989	SRSF6	100	97.037	Rhinopithecus_roxellana
ENSSPUG00000004967	SRSF6	93	65.409	ENSSBOG00000034078	-	54	75.978	Saimiri_boliviensis_boliviensis
ENSSPUG00000004967	SRSF6	100	97.037	ENSSBOG00000033708	-	100	97.037	Saimiri_boliviensis_boliviensis
ENSSPUG00000004967	SRSF6	100	82.267	ENSSHAG00000012805	SRSF6	100	80.814	Sarcophilus_harrisii
ENSSPUG00000004967	SRSF6	93	63.025	ENSSFOG00015019681	-	53	83.420	Scleropages_formosus
ENSSPUG00000004967	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	59	90.110	Scleropages_formosus
ENSSPUG00000004967	SRSF6	59	92.500	ENSSMAG00000014861	-	94	65.354	Scophthalmus_maximus
ENSSPUG00000004967	SRSF6	71	73.663	ENSSMAG00000017447	-	55	82.222	Scophthalmus_maximus
ENSSPUG00000004967	SRSF6	98	59.441	ENSSDUG00000016097	srsf6a	53	89.189	Seriola_dumerili
ENSSPUG00000004967	SRSF6	65	81.818	ENSSDUG00000011036	-	96	81.818	Seriola_dumerili
ENSSPUG00000004967	SRSF6	98	59.441	ENSSLDG00000022841	srsf6a	53	89.189	Seriola_lalandi_dorsalis
ENSSPUG00000004967	SRSF6	65	81.818	ENSSLDG00000014858	-	96	81.818	Seriola_lalandi_dorsalis
ENSSPUG00000004967	SRSF6	65	79.545	ENSSPAG00000021913	-	92	79.545	Stegastes_partitus
ENSSPUG00000004967	SRSF6	98	59.441	ENSSPAG00000002362	srsf6a	66	87.234	Stegastes_partitus
ENSSPUG00000004967	SRSF6	94	86.728	ENSSSCG00000007362	SRSF6	61	93.989	Sus_scrofa
ENSSPUG00000004967	SRSF6	93	88.235	ENSTGUG00000003455	SRSF6	100	95.690	Taeniopygia_guttata
ENSSPUG00000004967	SRSF6	64	86.207	ENSTRUG00000021397	-	95	86.207	Takifugu_rubripes
ENSSPUG00000004967	SRSF6	89	71.429	ENSTNIG00000001692	srsf6a	56	87.568	Tetraodon_nigroviridis
ENSSPUG00000004967	SRSF6	100	96.296	ENSUAMG00000003559	SRSF6	100	96.296	Ursus_americanus
ENSSPUG00000004967	SRSF6	100	76.296	ENSVVUG00000019276	-	100	76.296	Vulpes_vulpes
ENSSPUG00000004967	SRSF6	58	94.872	ENSXMAG00000021849	srsf6a	55	89.503	Xiphophorus_maculatus