EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000005237 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 3432 bases
Position: chrQEPC01002330.1:987964-991395
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006845	RNase_P_pop3	PF08228.11	8e-08	1	1
ENSSPUP00000006845	Ribosomal_L7Ae	PF01248.26	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007281	-	855	-	ENSSPUP00000006845	284 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000005237	-	99	97.518	ENSSPUG00000018363	-	99	97.518
ENSSPUG00000005237	-	96	90.146	ENSSPUG00000008560	-	98	90.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005237	-	100	57.292	ENSG00000152464	RPP38	100	61.538	Homo_sapiens
ENSSPUG00000005237	-	89	46.743	ENSAPOG00000001240	rpp38	92	46.992	Acanthochromis_polyacanthus
ENSSPUG00000005237	-	100	58.188	ENSAMEG00000018832	RPP38	100	58.188	Ailuropoda_melanoleuca
ENSSPUG00000005237	-	92	44.118	ENSACIG00000011592	rpp38	97	43.929	Amphilophus_citrinellus
ENSSPUG00000005237	-	89	43.223	ENSAOCG00000017293	rpp38	92	43.525	Amphiprion_ocellaris
ENSSPUG00000005237	-	89	45.736	ENSAPEG00000002315	rpp38	95	45.956	Amphiprion_percula
ENSSPUG00000005237	-	95	44.840	ENSATEG00000000731	rpp38	98	44.840	Anabas_testudineus
ENSSPUG00000005237	-	93	55.639	ENSAPLG00000002054	RPP38	99	56.475	Anas_platyrhynchos
ENSSPUG00000005237	-	67	51.269	ENSACLG00000016958	rpp38	92	44.944	Astatotilapia_calliptera
ENSSPUG00000005237	-	67	50.254	ENSACLG00000016962	rpp38	91	44.697	Astatotilapia_calliptera
ENSSPUG00000005237	-	88	41.270	ENSAMXG00000025023	rpp38	98	41.577	Astyanax_mexicanus
ENSSPUG00000005237	-	100	52.414	ENSBTAG00000007702	RPP38	100	54.167	Bos_taurus
ENSSPUG00000005237	-	100	57.491	ENSCAFG00000024373	RPP38	100	57.491	Canis_familiaris
ENSSPUG00000005237	-	100	57.491	ENSCAFG00020008008	RPP38	100	57.491	Canis_lupus_dingo
ENSSPUG00000005237	-	100	51.724	ENSCHIG00000012484	RPP38	100	53.472	Capra_hircus
ENSSPUG00000005237	-	97	56.940	ENSCPOG00000003981	RPP38	97	56.940	Cavia_porcellus
ENSSPUG00000005237	-	100	56.944	ENSCLAG00000010194	RPP38	100	56.944	Chinchilla_lanigera
ENSSPUG00000005237	-	94	56.506	ENSCSAG00000019055	RPP38	100	58.537	Chlorocebus_sabaeus
ENSSPUG00000005237	-	100	60.417	ENSCHOG00000004335	RPP38	100	60.764	Choloepus_hoffmanni
ENSSPUG00000005237	-	100	55.789	ENSCGRG00001001395	Rpp38	100	56.294	Cricetulus_griseus_chok1gshd
ENSSPUG00000005237	-	100	55.789	ENSCGRG00000017441	Rpp38	100	56.294	Cricetulus_griseus_crigri
ENSSPUG00000005237	-	92	43.071	ENSCSEG00000001721	rpp38	99	43.214	Cynoglossus_semilaevis
ENSSPUG00000005237	-	89	41.288	ENSCVAG00000001676	rpp38	92	41.636	Cyprinodon_variegatus
ENSSPUG00000005237	-	89	45.660	ENSDARG00000040350	rpp38	95	45.520	Danio_rerio
ENSSPUG00000005237	-	100	57.840	ENSDNOG00000040314	RPP38	100	57.840	Dasypus_novemcinctus
ENSSPUG00000005237	-	100	52.098	ENSDORG00000009783	Rpp38	100	52.098	Dipodomys_ordii
ENSSPUG00000005237	-	100	56.491	ENSETEG00000002839	RPP38	100	56.491	Echinops_telfairi
ENSSPUG00000005237	-	99	55.477	ENSEASG00005019783	RPP38	98	56.184	Equus_asinus_asinus
ENSSPUG00000005237	-	100	52.083	ENSEEUG00000014677	RPP38	100	53.125	Erinaceus_europaeus
ENSSPUG00000005237	-	90	42.652	ENSELUG00000010160	rpp38	96	43.253	Esox_lucius
ENSSPUG00000005237	-	100	55.749	ENSFCAG00000022449	RPP38	100	55.749	Felis_catus
ENSSPUG00000005237	-	94	55.970	ENSFALG00000014804	RPP38	96	56.318	Ficedula_albicollis
ENSSPUG00000005237	-	100	58.333	ENSFDAG00000018669	RPP38	100	58.333	Fukomys_damarensis
ENSSPUG00000005237	-	89	43.446	ENSFHEG00000013741	rpp38	92	45.956	Fundulus_heteroclitus
ENSSPUG00000005237	-	94	60.075	ENSGALG00000008794	RPP38	94	60.432	Gallus_gallus
ENSSPUG00000005237	-	52	50.331	ENSGACG00000009258	rpp38	90	50.331	Gasterosteus_aculeatus
ENSSPUG00000005237	-	67	50.761	ENSHBUG00000010937	rpp38	92	44.569	Haplochromis_burtoni
ENSSPUG00000005237	-	100	56.597	ENSHGLG00000012144	RPP38	100	56.597	Heterocephalus_glaber_female
ENSSPUG00000005237	-	88	40.945	ENSIPUG00000022879	rpp38	92	42.586	Ictalurus_punctatus
ENSSPUG00000005237	-	100	54.514	ENSSTOG00000025699	RPP38	98	55.208	Ictidomys_tridecemlineatus
ENSSPUG00000005237	-	100	57.491	ENSJJAG00000007523	Rpp38	100	57.491	Jaculus_jaculus
ENSSPUG00000005237	-	89	43.561	ENSKMAG00000003986	rpp38	93	43.273	Kryptolebias_marmoratus
ENSSPUG00000005237	-	90	42.751	ENSLBEG00000006853	rpp38	93	43.284	Labrus_bergylta
ENSSPUG00000005237	-	92	49.819	ENSLACG00000006502	RPP38	98	50.172	Latimeria_chalumnae
ENSSPUG00000005237	-	94	46.316	ENSLOCG00000018347	rpp38	94	49.822	Lepisosteus_oculatus
ENSSPUG00000005237	-	100	58.188	ENSLAFG00000000509	RPP38	100	58.188	Loxodonta_africana
ENSSPUG00000005237	-	94	55.762	ENSMMUG00000007679	RPP38	100	57.840	Macaca_mulatta
ENSSPUG00000005237	-	96	44.928	ENSMAMG00000012774	rpp38	96	44.928	Mastacembelus_armatus
ENSSPUG00000005237	-	67	51.269	ENSMZEG00005003200	rpp38	92	44.944	Maylandia_zebra
ENSSPUG00000005237	-	67	51.269	ENSMZEG00005003189	rpp38	92	45.318	Maylandia_zebra
ENSSPUG00000005237	-	94	58.427	ENSMGAG00000008217	RPP38	94	58.845	Meleagris_gallopavo
ENSSPUG00000005237	-	100	54.225	ENSMAUG00000003644	Rpp38	100	54.895	Mesocricetus_auratus
ENSSPUG00000005237	-	100	56.446	ENSMOCG00000007020	Rpp38	100	56.446	Microtus_ochrogaster
ENSSPUG00000005237	-	94	41.971	ENSMMOG00000003446	rpp38	96	41.697	Mola_mola
ENSSPUG00000005237	-	92	60.456	ENSMODG00000024091	RPP38	99	60.289	Monodelphis_domestica
ENSSPUG00000005237	-	93	41.993	ENSMALG00000002356	rpp38	96	41.993	Monopterus_albus
ENSSPUG00000005237	-	100	55.088	MGP_CAROLIEiJ_G0023133	Rpp38	100	55.088	Mus_caroli
ENSSPUG00000005237	-	100	55.439	ENSMUSG00000049950	Rpp38	100	55.439	Mus_musculus
ENSSPUG00000005237	-	100	54.930	MGP_PahariEiJ_G0019193	Rpp38	100	54.930	Mus_pahari
ENSSPUG00000005237	-	100	55.088	MGP_SPRETEiJ_G0024051	Rpp38	100	55.088	Mus_spretus
ENSSPUG00000005237	-	99	57.042	ENSMPUG00000018523	RPP38	99	57.042	Mustela_putorius_furo
ENSSPUG00000005237	-	94	55.019	ENSMLUG00000002153	RPP38	100	56.794	Myotis_lucifugus
ENSSPUG00000005237	-	100	53.287	ENSNGAG00000011066	Rpp38	100	53.287	Nannospalax_galili
ENSSPUG00000005237	-	67	50.777	ENSNBRG00000006994	rpp38	93	44.318	Neolamprologus_brichardi
ENSSPUG00000005237	-	89	43.511	ENSONIG00000020467	rpp38	91	44.776	Oreochromis_niloticus
ENSSPUG00000005237	-	94	55.019	ENSOCUG00000024367	-	100	56.446	Oryctolagus_cuniculus
ENSSPUG00000005237	-	94	54.647	ENSOCUG00000022768	-	100	56.098	Oryctolagus_cuniculus
ENSSPUG00000005237	-	90	43.820	ENSORLG00000009219	rpp38	97	45.161	Oryzias_latipes
ENSSPUG00000005237	-	94	42.086	ENSORLG00020011503	rpp38	96	43.448	Oryzias_latipes_hni
ENSSPUG00000005237	-	94	41.818	ENSORLG00015017702	rpp38	96	42.857	Oryzias_latipes_hsok
ENSSPUG00000005237	-	89	40.769	ENSOMEG00000005414	rpp38	99	43.448	Oryzias_melastigma
ENSSPUG00000005237	-	100	54.266	ENSOGAG00000008059	RPP38	100	54.266	Otolemur_garnettii
ENSSPUG00000005237	-	100	52.069	ENSOARG00000004534	RPP38	100	53.819	Ovis_aries
ENSSPUG00000005237	-	100	57.986	ENSPPAG00000041577	RPP38	91	58.333	Pan_paniscus
ENSSPUG00000005237	-	100	56.098	ENSPPRG00000015329	RPP38	100	56.098	Panthera_pardus
ENSSPUG00000005237	-	100	56.794	ENSPTIG00000007188	RPP38	100	56.794	Panthera_tigris_altaica
ENSSPUG00000005237	-	100	57.986	ENSPTRG00000002318	RPP38	91	58.333	Pan_troglodytes
ENSSPUG00000005237	-	92	45.985	ENSPKIG00000025652	rpp38	93	46.043	Paramormyrops_kingsleyae
ENSSPUG00000005237	-	99	69.504	ENSPSIG00000001527	RPP38	100	69.504	Pelodiscus_sinensis
ENSSPUG00000005237	-	100	54.895	ENSPEMG00000008375	Rpp38	100	56.294	Peromyscus_maniculatus_bairdii
ENSSPUG00000005237	-	97	59.928	ENSPCIG00000009096	RPP38	93	59.928	Phascolarctos_cinereus
ENSSPUG00000005237	-	62	47.514	ENSPFOG00000016823	rpp38	82	47.514	Poecilia_formosa
ENSSPUG00000005237	-	94	40.493	ENSPLAG00000007626	rpp38	96	40.141	Poecilia_latipinna
ENSSPUG00000005237	-	92	38.909	ENSPMEG00000020392	rpp38	99	39.427	Poecilia_mexicana
ENSSPUG00000005237	-	90	39.700	ENSPREG00000017744	rpp38	94	41.509	Poecilia_reticulata
ENSSPUG00000005237	-	100	57.292	ENSPPYG00000002113	RPP38	100	58.333	Pongo_abelii
ENSSPUG00000005237	-	94	54.444	ENSPVAG00000007155	RPP38	100	56.250	Pteropus_vampyrus
ENSSPUG00000005237	-	67	51.269	ENSPNYG00000004293	rpp38	92	45.318	Pundamilia_nyererei
ENSSPUG00000005237	-	88	40.234	ENSPNAG00000010633	rpp38	96	39.716	Pygocentrus_nattereri
ENSSPUG00000005237	-	98	54.839	ENSRNOG00000038025	Rpp38	99	54.839	Rattus_norvegicus
ENSSPUG00000005237	-	97	61.372	ENSSHAG00000015529	RPP38	99	61.372	Sarcophilus_harrisii
ENSSPUG00000005237	-	90	45.736	ENSSMAG00000018276	rpp38	91	45.736	Scophthalmus_maximus
ENSSPUG00000005237	-	89	43.359	ENSSDUG00000001651	rpp38	93	44.737	Seriola_dumerili
ENSSPUG00000005237	-	89	44.141	ENSSLDG00000014355	rpp38	93	44.487	Seriola_lalandi_dorsalis
ENSSPUG00000005237	-	100	45.775	ENSSARG00000012099	RPP38	100	45.775	Sorex_araneus
ENSSPUG00000005237	-	89	43.359	ENSSPAG00000020387	rpp38	95	43.123	Stegastes_partitus
ENSSPUG00000005237	-	100	54.296	ENSSSCG00000027110	RPP38	100	54.296	Sus_scrofa
ENSSPUG00000005237	-	94	56.391	ENSTGUG00000001366	RPP38	99	56.727	Taeniopygia_guttata
ENSSPUG00000005237	-	92	44.195	ENSTNIG00000001334	rpp38	95	44.195	Tetraodon_nigroviridis
ENSSPUG00000005237	-	100	54.861	ENSTTRG00000004420	RPP38	100	54.861	Tursiops_truncatus
ENSSPUG00000005237	-	100	57.143	ENSUAMG00000002618	RPP38	100	57.143	Ursus_americanus
ENSSPUG00000005237	-	100	56.747	ENSUMAG00000012382	RPP38	100	57.439	Ursus_maritimus
ENSSPUG00000005237	-	100	57.491	ENSVVUG00000005272	RPP38	100	57.491	Vulpes_vulpes
ENSSPUG00000005237	-	92	50.929	ENSXETG00000003419	rpp38	97	51.439	Xenopus_tropicalis