EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000005254 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 43347 bases
Position: chrQEPC01014195.1:63751-107097
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006832	HAT	PF02184.16	1.1e-40	1	2
ENSSPUP00000006832	HAT	PF02184.16	1.1e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007268	CRNKL1-201	2058	-	ENSSPUP00000006832	685 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005254	CRNKL1	99	92.240	ENSG00000101343	CRNKL1	99	92.240	Homo_sapiens
ENSSPUG00000005254	CRNKL1	100	86.919	ENSAPOG00000009705	crnkl1	98	86.538	Acanthochromis_polyacanthus
ENSSPUG00000005254	CRNKL1	99	93.363	ENSAMEG00000000270	CRNKL1	82	93.411	Ailuropoda_melanoleuca
ENSSPUG00000005254	CRNKL1	100	84.985	ENSACIG00000015267	crnkl1	91	84.985	Amphilophus_citrinellus
ENSSPUG00000005254	CRNKL1	100	86.919	ENSAOCG00000021964	crnkl1	91	86.919	Amphiprion_ocellaris
ENSSPUG00000005254	CRNKL1	99	87.372	ENSAPEG00000015041	crnkl1	90	87.372	Amphiprion_percula
ENSSPUG00000005254	CRNKL1	99	86.344	ENSATEG00000001068	crnkl1	89	86.344	Anabas_testudineus
ENSSPUG00000005254	CRNKL1	99	90.816	ENSAPLG00000013105	CRNKL1	99	90.816	Anas_platyrhynchos
ENSSPUG00000005254	CRNKL1	100	93.732	ENSACAG00000005284	CRNKL1	100	93.732	Anolis_carolinensis
ENSSPUG00000005254	CRNKL1	92	93.016	ENSANAG00000024889	CRNKL1	99	93.016	Aotus_nancymaae
ENSSPUG00000005254	CRNKL1	100	87.172	ENSACLG00000010813	crnkl1	90	87.172	Astatotilapia_calliptera
ENSSPUG00000005254	CRNKL1	97	88.271	ENSAMXG00000018334	crnkl1	93	86.463	Astyanax_mexicanus
ENSSPUG00000005254	CRNKL1	99	93.255	ENSBTAG00000008472	CRNKL1	98	93.255	Bos_taurus
ENSSPUG00000005254	CRNKL1	93	62.053	WBGene00019762	M03F8.3	91	61.054	Caenorhabditis_elegans
ENSSPUG00000005254	CRNKL1	99	92.094	ENSCJAG00000005393	CRNKL1	99	92.094	Callithrix_jacchus
ENSSPUG00000005254	CRNKL1	99	93.215	ENSCAFG00000005333	CRNKL1	94	93.265	Canis_familiaris
ENSSPUG00000005254	CRNKL1	99	93.265	ENSCAFG00020027488	CRNKL1	99	93.265	Canis_lupus_dingo
ENSSPUG00000005254	CRNKL1	99	92.082	ENSCHIG00000013171	CRNKL1	98	92.082	Capra_hircus
ENSSPUG00000005254	CRNKL1	99	92.533	ENSTSYG00000004197	CRNKL1	99	92.533	Carlito_syrichta
ENSSPUG00000005254	CRNKL1	95	91.086	ENSCAPG00000010501	CRNKL1	99	91.086	Cavia_aperea
ENSSPUG00000005254	CRNKL1	99	91.801	ENSCPOG00000004418	CRNKL1	99	91.801	Cavia_porcellus
ENSSPUG00000005254	CRNKL1	99	91.947	ENSCCAG00000027037	CRNKL1	99	91.947	Cebus_capucinus
ENSSPUG00000005254	CRNKL1	99	92.094	ENSCATG00000034247	CRNKL1	99	92.094	Cercocebus_atys
ENSSPUG00000005254	CRNKL1	99	92.094	ENSCLAG00000013859	CRNKL1	99	92.094	Chinchilla_lanigera
ENSSPUG00000005254	CRNKL1	99	92.094	ENSCSAG00000011434	CRNKL1	99	92.094	Chlorocebus_sabaeus
ENSSPUG00000005254	CRNKL1	99	92.625	ENSCHOG00000006371	CRNKL1	83	92.679	Choloepus_hoffmanni
ENSSPUG00000005254	CRNKL1	99	94.591	ENSCPBG00000023501	CRNKL1	99	94.591	Chrysemys_picta_bellii
ENSSPUG00000005254	CRNKL1	97	69.127	ENSCING00000002709	-	99	67.883	Ciona_intestinalis
ENSSPUG00000005254	CRNKL1	99	92.094	ENSCANG00000038789	CRNKL1	99	92.094	Colobus_angolensis_palliatus
ENSSPUG00000005254	CRNKL1	99	92.826	ENSCGRG00001001115	-	99	92.826	Cricetulus_griseus_chok1gshd
ENSSPUG00000005254	CRNKL1	99	92.826	ENSCGRG00001000687	-	99	92.826	Cricetulus_griseus_chok1gshd
ENSSPUG00000005254	CRNKL1	99	92.826	ENSCGRG00000007854	Crnkl1	99	92.826	Cricetulus_griseus_crigri
ENSSPUG00000005254	CRNKL1	99	86.834	ENSCSEG00000005594	crnkl1	86	86.834	Cynoglossus_semilaevis
ENSSPUG00000005254	CRNKL1	97	87.706	ENSCVAG00000015172	crnkl1	92	85.693	Cyprinodon_variegatus
ENSSPUG00000005254	CRNKL1	97	86.576	ENSDARG00000007901	crnkl1	90	85.526	Danio_rerio
ENSSPUG00000005254	CRNKL1	99	93.402	ENSDNOG00000016226	CRNKL1	95	93.402	Dasypus_novemcinctus
ENSSPUG00000005254	CRNKL1	97	84.581	ENSDORG00000030174	-	99	84.581	Dipodomys_ordii
ENSSPUG00000005254	CRNKL1	97	85.435	ENSDORG00000023724	-	98	85.435	Dipodomys_ordii
ENSSPUG00000005254	CRNKL1	99	90.711	ENSDORG00000000394	-	99	90.711	Dipodomys_ordii
ENSSPUG00000005254	CRNKL1	97	67.751	FBgn0000377	crn	98	67.006	Drosophila_melanogaster
ENSSPUG00000005254	CRNKL1	99	81.259	ENSETEG00000003711	CRNKL1	83	81.259	Echinops_telfairi
ENSSPUG00000005254	CRNKL1	99	60.594	ENSEBUG00000013461	crnkl1	97	57.994	Eptatretus_burgeri
ENSSPUG00000005254	CRNKL1	99	93.558	ENSEASG00005002072	CRNKL1	99	93.558	Equus_asinus_asinus
ENSSPUG00000005254	CRNKL1	99	93.558	ENSECAG00000022215	CRNKL1	99	93.558	Equus_caballus
ENSSPUG00000005254	CRNKL1	99	90.708	ENSEEUG00000000413	CRNKL1	92	90.776	Erinaceus_europaeus
ENSSPUG00000005254	CRNKL1	97	86.228	ENSELUG00000015424	crnkl1	97	84.649	Esox_lucius
ENSSPUG00000005254	CRNKL1	99	93.411	ENSFCAG00000000714	CRNKL1	99	93.411	Felis_catus
ENSSPUG00000005254	CRNKL1	98	90.896	ENSFALG00000004611	CRNKL1	99	90.896	Ficedula_albicollis
ENSSPUG00000005254	CRNKL1	99	92.375	ENSFDAG00000000604	CRNKL1	99	92.240	Fukomys_damarensis
ENSSPUG00000005254	CRNKL1	98	86.795	ENSFHEG00000013163	crnkl1	88	86.795	Fundulus_heteroclitus
ENSSPUG00000005254	CRNKL1	97	85.202	ENSGMOG00000007609	crnkl1	96	82.640	Gadus_morhua
ENSSPUG00000005254	CRNKL1	99	93.421	ENSGALG00000008429	CRNKL1	99	93.421	Gallus_gallus
ENSSPUG00000005254	CRNKL1	97	87.256	ENSGAFG00000014249	crnkl1	90	85.673	Gambusia_affinis
ENSSPUG00000005254	CRNKL1	100	84.104	ENSGACG00000011852	crnkl1	92	84.104	Gasterosteus_aculeatus
ENSSPUG00000005254	CRNKL1	95	93.119	ENSGAGG00000021233	CRNKL1	99	93.594	Gopherus_agassizii
ENSSPUG00000005254	CRNKL1	99	92.240	ENSGGOG00000014176	CRNKL1	99	92.240	Gorilla_gorilla
ENSSPUG00000005254	CRNKL1	100	87.318	ENSHBUG00000005246	crnkl1	90	87.318	Haplochromis_burtoni
ENSSPUG00000005254	CRNKL1	99	92.094	ENSHGLG00000010856	CRNKL1	99	92.094	Heterocephalus_glaber_female
ENSSPUG00000005254	CRNKL1	99	92.094	ENSHGLG00100011521	CRNKL1	99	92.094	Heterocephalus_glaber_male
ENSSPUG00000005254	CRNKL1	98	85.075	ENSHCOG00000006420	crnkl1	99	83.673	Hippocampus_comes
ENSSPUG00000005254	CRNKL1	97	75.415	ENSIPUG00000006836	-	98	75.187	Ictalurus_punctatus
ENSSPUG00000005254	CRNKL1	93	68.711	ENSIPUG00000000315	-	99	69.921	Ictalurus_punctatus
ENSSPUG00000005254	CRNKL1	94	86.903	ENSIPUG00000006751	crnkl1	93	85.097	Ictalurus_punctatus
ENSSPUG00000005254	CRNKL1	99	92.826	ENSSTOG00000014747	CRNKL1	99	92.826	Ictidomys_tridecemlineatus
ENSSPUG00000005254	CRNKL1	99	91.130	ENSJJAG00000016926	Crnkl1	99	91.130	Jaculus_jaculus
ENSSPUG00000005254	CRNKL1	100	85.838	ENSKMAG00000003620	crnkl1	88	85.838	Kryptolebias_marmoratus
ENSSPUG00000005254	CRNKL1	97	70.431	ENSLBEG00000003543	crnkl1	92	70.365	Labrus_bergylta
ENSSPUG00000005254	CRNKL1	99	88.596	ENSLACG00000001129	CRNKL1	100	88.596	Latimeria_chalumnae
ENSSPUG00000005254	CRNKL1	97	89.624	ENSLOCG00000016889	crnkl1	95	88.433	Lepisosteus_oculatus
ENSSPUG00000005254	CRNKL1	99	92.544	ENSLAFG00000004512	CRNKL1	99	93.275	Loxodonta_africana
ENSSPUG00000005254	CRNKL1	99	92.094	ENSMFAG00000039893	CRNKL1	99	92.094	Macaca_fascicularis
ENSSPUG00000005254	CRNKL1	99	92.094	ENSMMUG00000007709	CRNKL1	99	92.094	Macaca_mulatta
ENSSPUG00000005254	CRNKL1	99	92.094	ENSMNEG00000037490	CRNKL1	99	92.094	Macaca_nemestrina
ENSSPUG00000005254	CRNKL1	99	92.094	ENSMLEG00000034885	CRNKL1	99	92.094	Mandrillus_leucophaeus
ENSSPUG00000005254	CRNKL1	99	86.283	ENSMAMG00000008757	crnkl1	89	86.283	Mastacembelus_armatus
ENSSPUG00000005254	CRNKL1	100	87.172	ENSMZEG00005022345	crnkl1	91	87.172	Maylandia_zebra
ENSSPUG00000005254	CRNKL1	99	93.139	ENSMGAG00000003452	CRNKL1	94	93.139	Meleagris_gallopavo
ENSSPUG00000005254	CRNKL1	99	92.972	ENSMAUG00000020764	Crnkl1	99	92.972	Mesocricetus_auratus
ENSSPUG00000005254	CRNKL1	99	92.679	ENSMICG00000006048	CRNKL1	99	92.679	Microcebus_murinus
ENSSPUG00000005254	CRNKL1	96	66.867	ENSMOCG00000004179	-	98	65.893	Microtus_ochrogaster
ENSSPUG00000005254	CRNKL1	99	84.748	ENSMOCG00000000681	-	99	84.748	Microtus_ochrogaster
ENSSPUG00000005254	CRNKL1	92	84.968	ENSMMOG00000017601	crnkl1	97	84.968	Mola_mola
ENSSPUG00000005254	CRNKL1	99	90.607	ENSMODG00000005961	-	99	90.607	Monodelphis_domestica
ENSSPUG00000005254	CRNKL1	99	85.652	ENSMODG00000010857	-	99	85.652	Monodelphis_domestica
ENSSPUG00000005254	CRNKL1	100	60.781	ENSMALG00000011211	crnkl1	88	63.947	Monopterus_albus
ENSSPUG00000005254	CRNKL1	99	92.972	MGP_CAROLIEiJ_G0024394	Crnkl1	99	92.972	Mus_caroli
ENSSPUG00000005254	CRNKL1	99	93.119	ENSMUSG00000001767	Crnkl1	99	93.119	Mus_musculus
ENSSPUG00000005254	CRNKL1	99	91.362	MGP_PahariEiJ_G0025838	Crnkl1	99	91.362	Mus_pahari
ENSSPUG00000005254	CRNKL1	99	93.119	MGP_SPRETEiJ_G0025312	Crnkl1	99	93.119	Mus_spretus
ENSSPUG00000005254	CRNKL1	99	93.265	ENSMPUG00000001226	CRNKL1	99	93.265	Mustela_putorius_furo
ENSSPUG00000005254	CRNKL1	99	92.784	ENSMLUG00000016513	CRNKL1	89	92.836	Myotis_lucifugus
ENSSPUG00000005254	CRNKL1	99	90.948	ENSNGAG00000023097	Crnkl1	99	90.948	Nannospalax_galili
ENSSPUG00000005254	CRNKL1	100	87.026	ENSNBRG00000007867	crnkl1	90	87.026	Neolamprologus_brichardi
ENSSPUG00000005254	CRNKL1	99	88.580	ENSNLEG00000009862	CRNKL1	99	88.580	Nomascus_leucogenys
ENSSPUG00000005254	CRNKL1	99	85.359	ENSMEUG00000002361	-	99	85.359	Notamacropus_eugenii
ENSSPUG00000005254	CRNKL1	97	93.713	ENSMEUG00000012167	-	99	93.713	Notamacropus_eugenii
ENSSPUG00000005254	CRNKL1	86	63.654	ENSOPRG00000009242	-	62	63.654	Ochotona_princeps
ENSSPUG00000005254	CRNKL1	99	91.801	ENSODEG00000012175	CRNKL1	99	91.801	Octodon_degus
ENSSPUG00000005254	CRNKL1	100	86.735	ENSONIG00000018728	crnkl1	90	86.735	Oreochromis_niloticus
ENSSPUG00000005254	CRNKL1	99	92.229	ENSOCUG00000015484	CRNKL1	83	92.868	Oryctolagus_cuniculus
ENSSPUG00000005254	CRNKL1	98	85.544	ENSORLG00000017240	crnkl1	94	81.711	Oryzias_latipes
ENSSPUG00000005254	CRNKL1	98	85.693	ENSORLG00020001742	crnkl1	90	85.693	Oryzias_latipes_hni
ENSSPUG00000005254	CRNKL1	98	85.693	ENSORLG00015019564	crnkl1	90	85.693	Oryzias_latipes_hsok
ENSSPUG00000005254	CRNKL1	99	85.109	ENSOMEG00000019895	crnkl1	91	85.109	Oryzias_melastigma
ENSSPUG00000005254	CRNKL1	99	92.533	ENSOGAG00000011544	CRNKL1	99	92.533	Otolemur_garnettii
ENSSPUG00000005254	CRNKL1	99	93.205	ENSOARG00000002150	CRNKL1	89	93.255	Ovis_aries
ENSSPUG00000005254	CRNKL1	99	91.003	ENSPPAG00000027847	CRNKL1	83	91.069	Pan_paniscus
ENSSPUG00000005254	CRNKL1	99	93.411	ENSPPRG00000001955	CRNKL1	99	93.411	Panthera_pardus
ENSSPUG00000005254	CRNKL1	99	93.411	ENSPTIG00000007393	CRNKL1	99	93.411	Panthera_tigris_altaica
ENSSPUG00000005254	CRNKL1	99	92.240	ENSPTRG00000030609	CRNKL1	99	92.240	Pan_troglodytes
ENSSPUG00000005254	CRNKL1	99	92.094	ENSPANG00000017420	CRNKL1	99	92.094	Papio_anubis
ENSSPUG00000005254	CRNKL1	97	82.432	ENSPKIG00000017093	crnkl1	89	81.314	Paramormyrops_kingsleyae
ENSSPUG00000005254	CRNKL1	99	93.098	ENSPSIG00000012705	CRNKL1	99	93.098	Pelodiscus_sinensis
ENSSPUG00000005254	CRNKL1	99	79.155	ENSPMGG00000006263	crnkl1	96	79.148	Periophthalmus_magnuspinnatus
ENSSPUG00000005254	CRNKL1	99	93.119	ENSPEMG00000000073	-	99	93.119	Peromyscus_maniculatus_bairdii
ENSSPUG00000005254	CRNKL1	99	81.541	ENSPMAG00000002250	crnkl1	99	81.541	Petromyzon_marinus
ENSSPUG00000005254	CRNKL1	99	93.548	ENSPCIG00000025825	CRNKL1	95	93.548	Phascolarctos_cinereus
ENSSPUG00000005254	CRNKL1	97	87.106	ENSPFOG00000005102	crnkl1	91	86.350	Poecilia_formosa
ENSSPUG00000005254	CRNKL1	97	87.106	ENSPLAG00000007288	crnkl1	89	85.234	Poecilia_latipinna
ENSSPUG00000005254	CRNKL1	97	87.256	ENSPMEG00000008865	crnkl1	92	86.499	Poecilia_mexicana
ENSSPUG00000005254	CRNKL1	97	86.807	ENSPREG00000012615	crnkl1	92	85.066	Poecilia_reticulata
ENSSPUG00000005254	CRNKL1	99	92.035	ENSPPYG00000010747	CRNKL1	81	92.094	Pongo_abelii
ENSSPUG00000005254	CRNKL1	99	87.758	ENSPCAG00000003296	CRNKL1	85	87.848	Procavia_capensis
ENSSPUG00000005254	CRNKL1	99	91.593	ENSPCOG00000017608	CRNKL1	83	91.654	Propithecus_coquereli
ENSSPUG00000005254	CRNKL1	99	93.363	ENSPVAG00000006207	CRNKL1	83	93.411	Pteropus_vampyrus
ENSSPUG00000005254	CRNKL1	100	87.026	ENSPNYG00000001977	crnkl1	90	87.026	Pundamilia_nyererei
ENSSPUG00000005254	CRNKL1	98	88.690	ENSPNAG00000001507	crnkl1	98	83.843	Pygocentrus_nattereri
ENSSPUG00000005254	CRNKL1	99	93.119	ENSRNOG00000010587	Crnkl1	99	93.119	Rattus_norvegicus
ENSSPUG00000005254	CRNKL1	99	92.826	ENSRNOG00000040045	Crnkl1	99	92.826	Rattus_norvegicus
ENSSPUG00000005254	CRNKL1	99	91.947	ENSRBIG00000031770	CRNKL1	99	91.947	Rhinopithecus_bieti
ENSSPUG00000005254	CRNKL1	99	91.801	ENSRROG00000040450	CRNKL1	99	91.801	Rhinopithecus_roxellana
ENSSPUG00000005254	CRNKL1	94	37.391	YLR117C	CLF1	99	37.482	Saccharomyces_cerevisiae
ENSSPUG00000005254	CRNKL1	99	92.094	ENSSBOG00000029672	CRNKL1	99	92.094	Saimiri_boliviensis_boliviensis
ENSSPUG00000005254	CRNKL1	96	74.468	ENSSHAG00000011199	CRNKL1	99	74.468	Sarcophilus_harrisii
ENSSPUG00000005254	CRNKL1	97	87.934	ENSSFOG00015000946	crnkl1	89	86.237	Scleropages_formosus
ENSSPUG00000005254	CRNKL1	100	85.298	ENSSMAG00000007933	crnkl1	89	85.298	Scophthalmus_maximus
ENSSPUG00000005254	CRNKL1	99	80.294	ENSSDUG00000012625	crnkl1	91	77.825	Seriola_dumerili
ENSSPUG00000005254	CRNKL1	99	87.334	ENSSLDG00000021413	crnkl1	92	84.583	Seriola_lalandi_dorsalis
ENSSPUG00000005254	CRNKL1	99	92.240	ENSSARG00000006443	CRNKL1	82	92.240	Sorex_araneus
ENSSPUG00000005254	CRNKL1	99	86.277	ENSSPAG00000016150	crnkl1	89	86.277	Stegastes_partitus
ENSSPUG00000005254	CRNKL1	99	93.265	ENSSSCG00000038587	CRNKL1	99	93.265	Sus_scrofa
ENSSPUG00000005254	CRNKL1	99	91.387	ENSTGUG00000007645	CRNKL1	98	91.387	Taeniopygia_guttata
ENSSPUG00000005254	CRNKL1	97	81.559	ENSTRUG00000015417	crnkl1	90	80.441	Takifugu_rubripes
ENSSPUG00000005254	CRNKL1	97	85.329	ENSTNIG00000010710	crnkl1	99	83.772	Tetraodon_nigroviridis
ENSSPUG00000005254	CRNKL1	91	92.000	ENSTBEG00000001304	CRNKL1	82	92.063	Tupaia_belangeri
ENSSPUG00000005254	CRNKL1	91	89.600	ENSTTRG00000000484	CRNKL1	81	89.683	Tursiops_truncatus
ENSSPUG00000005254	CRNKL1	99	93.411	ENSUAMG00000018586	CRNKL1	99	93.411	Ursus_americanus
ENSSPUG00000005254	CRNKL1	99	93.411	ENSUMAG00000024957	CRNKL1	99	93.411	Ursus_maritimus
ENSSPUG00000005254	CRNKL1	99	93.215	ENSVVUG00000012559	CRNKL1	82	93.265	Vulpes_vulpes
ENSSPUG00000005254	CRNKL1	99	90.102	ENSXETG00000009698	crnkl1	99	90.102	Xenopus_tropicalis
ENSSPUG00000005254	CRNKL1	97	86.228	ENSXCOG00000000824	crnkl1	91	84.503	Xiphophorus_couchianus
ENSSPUG00000005254	CRNKL1	97	87.256	ENSXMAG00000006896	crnkl1	91	85.505	Xiphophorus_maculatus