EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000005288 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 16249 bases
Position: chrQEPC01000097.1:336708-352956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000006862	RRM_1	PF00076.22	1e-25	1	1
ENSSPUP00000006870	RRM_1	PF00076.22	6.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007300	-	1401	-	ENSSPUP00000006862	466 (aa)	-	-
ENSSPUT00000007309	-	5258	-	ENSSPUP00000006870	1719 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005288	-	98	80.720	ENSG00000101811	CSTF2	96	87.442	Homo_sapiens
ENSSPUG00000005288	-	52	85.306	ENSAPOG00000005630	cstf2	97	58.868	Acanthochromis_polyacanthus
ENSSPUG00000005288	-	97	76.815	ENSAMEG00000002082	CSTF2	80	85.522	Ailuropoda_melanoleuca
ENSSPUG00000005288	-	52	84.362	ENSACIG00000012852	cstf2	97	57.996	Amphilophus_citrinellus
ENSSPUG00000005288	-	53	84.677	ENSAOCG00000020905	cstf2	97	58.733	Amphiprion_ocellaris
ENSSPUG00000005288	-	52	85.597	ENSAPEG00000006526	cstf2	97	58.733	Amphiprion_percula
ENSSPUG00000005288	-	52	85.537	ENSATEG00000018186	cstf2	97	59.524	Anabas_testudineus
ENSSPUG00000005288	-	99	83.726	ENSAPLG00000007255	CSTF2	79	82.390	Anas_platyrhynchos
ENSSPUG00000005288	-	99	85.859	ENSANAG00000022342	CSTF2	100	64.955	Aotus_nancymaae
ENSSPUG00000005288	-	52	84.362	ENSACLG00000000779	cstf2	94	61.702	Astatotilapia_calliptera
ENSSPUG00000005288	-	82	85.657	ENSAMXG00000021477	cstf2	98	91.304	Astyanax_mexicanus
ENSSPUG00000005288	-	97	79.025	ENSBTAG00000003547	CSTF2	100	63.170	Bos_taurus
ENSSPUG00000005288	-	99	80.085	ENSCJAG00000004422	CSTF2	100	75.000	Callithrix_jacchus
ENSSPUG00000005288	-	98	80.085	ENSCAFG00000017551	CSTF2	93	80.085	Canis_familiaris
ENSSPUG00000005288	-	99	84.848	ENSCAFG00020007619	CSTF2	93	80.085	Canis_lupus_dingo
ENSSPUG00000005288	-	97	79.237	ENSCHIG00000016994	CSTF2	100	63.393	Capra_hircus
ENSSPUG00000005288	-	99	80.720	ENSTSYG00000006529	CSTF2	100	65.179	Carlito_syrichta
ENSSPUG00000005288	-	97	80.085	ENSCPOG00000015255	CSTF2	85	93.590	Cavia_porcellus
ENSSPUG00000005288	-	99	80.085	ENSCCAG00000032975	CSTF2	100	64.955	Cebus_capucinus
ENSSPUG00000005288	-	98	80.508	ENSCATG00000022835	CSTF2	100	65.179	Cercocebus_atys
ENSSPUG00000005288	-	98	79.661	ENSCLAG00000001904	CSTF2	87	91.875	Chinchilla_lanigera
ENSSPUG00000005288	-	97	77.439	ENSCSAG00000010360	CSTF2	100	65.402	Chlorocebus_sabaeus
ENSSPUG00000005288	-	89	96.226	ENSCHOG00000012803	CSTF2	57	96.226	Choloepus_hoffmanni
ENSSPUG00000005288	-	97	92.141	ENSCPBG00000014293	CSTF2	100	75.114	Chrysemys_picta_bellii
ENSSPUG00000005288	-	98	80.720	ENSCANG00000030612	CSTF2	100	65.402	Colobus_angolensis_palliatus
ENSSPUG00000005288	-	97	78.737	ENSCGRG00001023023	Cstf2	100	60.690	Cricetulus_griseus_chok1gshd
ENSSPUG00000005288	-	96	78.038	ENSCGRG00000003897	Cstf2	100	62.500	Cricetulus_griseus_crigri
ENSSPUG00000005288	-	52	86.777	ENSCVAG00000005731	cstf2	97	62.235	Cyprinodon_variegatus
ENSSPUG00000005288	-	65	98.182	ENSDARG00000090788	cstf2	97	92.188	Danio_rerio
ENSSPUG00000005288	-	97	79.185	ENSDORG00000007195	Cstf2	89	91.975	Dipodomys_ordii
ENSSPUG00000005288	-	82	84.122	ENSETEG00000004931	CSTF2	61	87.838	Echinops_telfairi
ENSSPUG00000005288	-	98	77.033	ENSEASG00005001216	CSTF2	100	64.732	Equus_asinus_asinus
ENSSPUG00000005288	-	99	80.297	ENSECAG00000009325	CSTF2	100	64.732	Equus_caballus
ENSSPUG00000005288	-	98	80.085	ENSFCAG00000007000	CSTF2	100	64.286	Felis_catus
ENSSPUG00000005288	-	89	90.347	ENSFALG00000003859	CSTF2	77	89.961	Ficedula_albicollis
ENSSPUG00000005288	-	99	86.242	ENSFDAG00000002416	CSTF2	100	63.495	Fukomys_damarensis
ENSSPUG00000005288	-	52	84.362	ENSFHEG00000017065	cstf2	94	59.626	Fundulus_heteroclitus
ENSSPUG00000005288	-	51	79.325	ENSGMOG00000005145	cstf2	50	80.328	Gadus_morhua
ENSSPUG00000005288	-	98	88.323	ENSGALG00000006760	CSTF2	100	83.054	Gallus_gallus
ENSSPUG00000005288	-	53	82.731	ENSGAFG00000020027	cstf2	50	82.283	Gambusia_affinis
ENSSPUG00000005288	-	52	81.707	ENSGACG00000017326	cstf2	97	56.579	Gasterosteus_aculeatus
ENSSPUG00000005288	-	99	92.213	ENSGAGG00000006037	CSTF2	100	74.434	Gopherus_agassizii
ENSSPUG00000005288	-	98	80.720	ENSGGOG00000022267	CSTF2	100	65.402	Gorilla_gorilla
ENSSPUG00000005288	-	52	85.597	ENSHBUG00000016183	cstf2	94	62.476	Haplochromis_burtoni
ENSSPUG00000005288	-	98	80.508	ENSHGLG00000000659	-	88	90.303	Heterocephalus_glaber_female
ENSSPUG00000005288	-	98	67.146	ENSHGLG00000013455	-	100	55.732	Heterocephalus_glaber_female
ENSSPUG00000005288	-	98	67.146	ENSHGLG00100015391	-	100	55.732	Heterocephalus_glaber_male
ENSSPUG00000005288	-	98	80.508	ENSHGLG00100001130	-	88	90.303	Heterocephalus_glaber_male
ENSSPUG00000005288	-	52	86.008	ENSHCOG00000005157	cstf2	98	61.905	Hippocampus_comes
ENSSPUG00000005288	-	100	61.905	ENSIPUG00000017839	cstf2	99	60.421	Ictalurus_punctatus
ENSSPUG00000005288	-	97	80.720	ENSSTOG00000023445	CSTF2	87	91.824	Ictidomys_tridecemlineatus
ENSSPUG00000005288	-	97	79.873	ENSJJAG00000020507	Cstf2	87	91.824	Jaculus_jaculus
ENSSPUG00000005288	-	52	86.008	ENSKMAG00000001068	cstf2	97	61.508	Kryptolebias_marmoratus
ENSSPUG00000005288	-	99	81.605	ENSLACG00000015927	CSTF2	68	80.602	Latimeria_chalumnae
ENSSPUG00000005288	-	99	60.261	ENSLOCG00000015300	cstf2	94	59.369	Lepisosteus_oculatus
ENSSPUG00000005288	-	97	81.197	ENSLAFG00000000474	CSTF2	90	80.932	Loxodonta_africana
ENSSPUG00000005288	-	98	80.720	ENSMFAG00000043888	CSTF2	100	65.402	Macaca_fascicularis
ENSSPUG00000005288	-	97	80.132	ENSMMUG00000013008	CSTF2	100	61.922	Macaca_mulatta
ENSSPUG00000005288	-	98	80.720	ENSMNEG00000041824	CSTF2	100	65.402	Macaca_nemestrina
ENSSPUG00000005288	-	98	80.720	ENSMLEG00000036870	CSTF2	100	65.402	Mandrillus_leucophaeus
ENSSPUG00000005288	-	50	84.483	ENSMAMG00000020364	cstf2	96	60.000	Mastacembelus_armatus
ENSSPUG00000005288	-	52	84.362	ENSMZEG00005007200	cstf2	97	61.702	Maylandia_zebra
ENSSPUG00000005288	-	91	92.405	ENSMGAG00000004139	CSTF2	100	82.517	Meleagris_gallopavo
ENSSPUG00000005288	-	97	78.947	ENSMAUG00000000965	Cstf2	100	62.069	Mesocricetus_auratus
ENSSPUG00000005288	-	99	86.869	ENSMICG00000014121	CSTF2	100	63.811	Microcebus_murinus
ENSSPUG00000005288	-	96	79.229	ENSMOCG00000008081	Cstf2	100	61.739	Microtus_ochrogaster
ENSSPUG00000005288	-	100	87.205	ENSMODG00000011785	CSTF2	79	86.195	Monodelphis_domestica
ENSSPUG00000005288	-	99	85.185	MGP_CAROLIEiJ_G0033383	Cstf2	87	91.875	Mus_caroli
ENSSPUG00000005288	-	96	78.105	ENSMUSG00000031256	Cstf2	87	91.875	Mus_musculus
ENSSPUG00000005288	-	99	85.185	MGP_PahariEiJ_G0031923	Cstf2	93	78.270	Mus_pahari
ENSSPUG00000005288	-	99	85.185	MGP_SPRETEiJ_G0034548	Cstf2	87	91.875	Mus_spretus
ENSSPUG00000005288	-	100	85.185	ENSMPUG00000002339	CSTF2	77	85.185	Mustela_putorius_furo
ENSSPUG00000005288	-	99	85.185	ENSMLUG00000004598	CSTF2	73	85.185	Myotis_lucifugus
ENSSPUG00000005288	-	99	80.380	ENSNGAG00000021985	Cstf2	100	62.931	Nannospalax_galili
ENSSPUG00000005288	-	98	80.508	ENSNLEG00000007510	CSTF2	100	65.179	Nomascus_leucogenys
ENSSPUG00000005288	-	94	81.750	ENSMEUG00000014025	-	100	62.500	Notamacropus_eugenii
ENSSPUG00000005288	-	94	80.388	ENSMEUG00000007875	-	83	80.172	Notamacropus_eugenii
ENSSPUG00000005288	-	92	83.948	ENSMEUG00000011186	-	84	81.628	Notamacropus_eugenii
ENSSPUG00000005288	-	95	75.587	ENSOPRG00000003106	CSTF2	59	100.000	Ochotona_princeps
ENSSPUG00000005288	-	98	79.449	ENSODEG00000002059	CSTF2	100	62.457	Octodon_degus
ENSSPUG00000005288	-	71	82.072	ENSONIG00000002631	cstf2	52	82.745	Oreochromis_niloticus
ENSSPUG00000005288	-	91	98.039	ENSOANG00000004208	CSTF2	82	92.188	Ornithorhynchus_anatinus
ENSSPUG00000005288	-	97	79.873	ENSOCUG00000010468	CSTF2	89	76.626	Oryctolagus_cuniculus
ENSSPUG00000005288	-	98	61.034	ENSORLG00000001380	cstf2	97	60.461	Oryzias_latipes
ENSSPUG00000005288	-	98	60.039	ENSORLG00020021917	cstf2	97	60.461	Oryzias_latipes_hni
ENSSPUG00000005288	-	98	60.039	ENSORLG00015011996	cstf2	97	60.461	Oryzias_latipes_hsok
ENSSPUG00000005288	-	53	85.081	ENSOMEG00000015507	cstf2	97	62.055	Oryzias_melastigma
ENSSPUG00000005288	-	99	84.848	ENSOGAG00000011192	CSTF2	75	84.848	Otolemur_garnettii
ENSSPUG00000005288	-	97	79.237	ENSOARG00000001022	CSTF2	100	62.238	Ovis_aries
ENSSPUG00000005288	-	98	80.720	ENSPPAG00000031804	CSTF2	100	65.402	Pan_paniscus
ENSSPUG00000005288	-	98	80.085	ENSPPRG00000022492	CSTF2	100	64.286	Panthera_pardus
ENSSPUG00000005288	-	98	79.661	ENSPTIG00000009922	CSTF2	100	63.839	Panthera_tigris_altaica
ENSSPUG00000005288	-	98	80.720	ENSPTRG00000022090	CSTF2	100	65.402	Pan_troglodytes
ENSSPUG00000005288	-	99	86.532	ENSPANG00000002303	CSTF2	100	65.402	Papio_anubis
ENSSPUG00000005288	-	99	63.230	ENSPKIG00000005033	cstf2	97	59.406	Paramormyrops_kingsleyae
ENSSPUG00000005288	-	52	86.008	ENSPMGG00000006534	cstf2	97	60.234	Periophthalmus_magnuspinnatus
ENSSPUG00000005288	-	96	78.526	ENSPEMG00000019415	Cstf2	100	61.552	Peromyscus_maniculatus_bairdii
ENSSPUG00000005288	-	100	87.205	ENSPCIG00000002989	CSTF2	79	86.195	Phascolarctos_cinereus
ENSSPUG00000005288	-	84	83.133	ENSPREG00000011481	cstf2	69	82.677	Poecilia_reticulata
ENSSPUG00000005288	-	97	77.236	ENSPPYG00000020541	CSTF2	100	65.179	Pongo_abelii
ENSSPUG00000005288	-	99	81.466	ENSPCOG00000027744	CSTF2	100	63.636	Propithecus_coquereli
ENSSPUG00000005288	-	99	62.611	ENSPVAG00000008342	CSTF2	81	62.611	Pteropus_vampyrus
ENSSPUG00000005288	-	52	85.597	ENSPNYG00000010852	cstf2	60	87.179	Pundamilia_nyererei
ENSSPUG00000005288	-	99	63.960	ENSPNAG00000018887	cstf2	99	61.272	Pygocentrus_nattereri
ENSSPUG00000005288	-	96	79.015	ENSRNOG00000048025	Cstf2	93	75.770	Rattus_norvegicus
ENSSPUG00000005288	-	98	80.720	ENSRBIG00000030745	CSTF2	91	77.439	Rhinopithecus_bieti
ENSSPUG00000005288	-	98	80.297	ENSRROG00000045042	CSTF2	100	65.402	Rhinopithecus_roxellana
ENSSPUG00000005288	-	99	85.859	ENSSBOG00000021649	CSTF2	100	64.955	Saimiri_boliviensis_boliviensis
ENSSPUG00000005288	-	96	86.331	ENSSHAG00000003681	CSTF2	79	90.000	Sarcophilus_harrisii
ENSSPUG00000005288	-	92	79.110	ENSSFOG00015006348	cstf2	82	78.082	Scleropages_formosus
ENSSPUG00000005288	-	52	85.597	ENSSMAG00000013463	cstf2	97	60.980	Scophthalmus_maximus
ENSSPUG00000005288	-	94	84.459	ENSSSCG00000012486	CSTF2	100	76.645	Sus_scrofa
ENSSPUG00000005288	-	98	84.948	ENSTGUG00000002253	CSTF2	81	84.742	Taeniopygia_guttata
ENSSPUG00000005288	-	58	81.181	ENSTNIG00000016860	cstf2	80	65.747	Tetraodon_nigroviridis
ENSSPUG00000005288	-	96	79.873	ENSTTRG00000013556	CSTF2	100	62.392	Tursiops_truncatus
ENSSPUG00000005288	-	100	85.522	ENSUAMG00000026605	CSTF2	100	66.438	Ursus_americanus
ENSSPUG00000005288	-	95	84.899	ENSUMAG00000012417	CSTF2	100	73.820	Ursus_maritimus
ENSSPUG00000005288	-	86	77.982	ENSVPAG00000006466	CSTF2	68	77.982	Vicugna_pacos
ENSSPUG00000005288	-	98	80.085	ENSVVUG00000004717	CSTF2	100	62.392	Vulpes_vulpes
ENSSPUG00000005288	-	91	75.976	ENSXETG00000009642	cstf2	100	64.205	Xenopus_tropicalis
ENSSPUG00000005288	-	99	56.688	ENSXCOG00000016436	cstf2	97	54.251	Xiphophorus_couchianus
ENSSPUG00000005288	-	81	83.884	ENSXMAG00000013524	cstf2	69	83.401	Xiphophorus_maculatus