EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000005394 (Gene tree)
Gene ID
-
Gene Symbol
LSM3
Alias
SMX4|USS2|YLR438C
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Plus strand
Length
309 bases
Position
chrQEPC01010861.1:4320675-4320983
Accession
17874
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000006972LSMPF01423.224e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000007424LSM3-201309-ENSSPUP00000006972102 (aa)--
Gene Model
Click here to download ENSSPUG00000005394's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005394's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000005394LSM39390.526ENSSPUG00000017047-9990.526
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000005394LSM310089.216ENSG00000170860LSM310089.216Homo_sapiens
ENSSPUG00000005394LSM310086.275ENSAPOG00000018947lsm310086.275Acanthochromis_polyacanthus
ENSSPUG00000005394LSM310089.216ENSAMEG00000009405LSM310089.216Ailuropoda_melanoleuca
ENSSPUG00000005394LSM310085.294ENSACIG00000004574lsm37185.294Amphilophus_citrinellus
ENSSPUG00000005394LSM310086.275ENSAOCG00000007658lsm310086.275Amphiprion_ocellaris
ENSSPUG00000005394LSM310086.275ENSAPEG00000018621lsm310086.275Amphiprion_percula
ENSSPUG00000005394LSM310086.275ENSATEG00000005153lsm310086.275Anabas_testudineus
ENSSPUG00000005394LSM39390.526ENSAPLG00000014499LSM310090.526Anas_platyrhynchos
ENSSPUG00000005394LSM310090.196ENSACAG00000013503LSM310090.196Anolis_carolinensis
ENSSPUG00000005394LSM310089.216ENSANAG00000034627LSM310089.216Aotus_nancymaae
ENSSPUG00000005394LSM310086.275ENSANAG00000002903-10086.275Aotus_nancymaae
ENSSPUG00000005394LSM39586.598ENSACLG00000001726-9486.598Astatotilapia_calliptera
ENSSPUG00000005394LSM310088.235ENSAMXG00000041214lsm310088.235Astyanax_mexicanus
ENSSPUG00000005394LSM39490.625ENSBTAG00000007363LSM310090.625Bos_taurus
ENSSPUG00000005394LSM310062.745WBGene00003077lsm-310062.745Caenorhabditis_elegans
ENSSPUG00000005394LSM310087.255ENSCAFG00000001760LSM310087.255Canis_familiaris
ENSSPUG00000005394LSM310088.235ENSCAFG00020026452-10088.235Canis_lupus_dingo
ENSSPUG00000005394LSM310079.439ENSCAFG00020020950-10079.439Canis_lupus_dingo
ENSSPUG00000005394LSM310088.235ENSCAFG00020017266-10088.235Canis_lupus_dingo
ENSSPUG00000005394LSM310087.255ENSCAFG00020021584-10087.255Canis_lupus_dingo
ENSSPUG00000005394LSM310081.373ENSCAFG00020016680-10081.373Canis_lupus_dingo
ENSSPUG00000005394LSM310089.216ENSCHIG00000024650LSM310089.216Capra_hircus
ENSSPUG00000005394LSM310088.235ENSTSYG00000005204-10088.235Carlito_syrichta
ENSSPUG00000005394LSM39971.287ENSTSYG00000028528-9971.287Carlito_syrichta
ENSSPUG00000005394LSM39490.625ENSCAPG00000015760LSM310090.625Cavia_aperea
ENSSPUG00000005394LSM310089.216ENSCPOG00000034071LSM310089.216Cavia_porcellus
ENSSPUG00000005394LSM310089.216ENSCCAG00000019503-10089.216Cebus_capucinus
ENSSPUG00000005394LSM310070.588ENSCCAG00000032763-10070.588Cebus_capucinus
ENSSPUG00000005394LSM310089.216ENSCCAG00000036499-10089.216Cebus_capucinus
ENSSPUG00000005394LSM310089.216ENSCATG00000039421LSM310089.216Cercocebus_atys
ENSSPUG00000005394LSM39973.267ENSCATG00000031630-9973.267Cercocebus_atys
ENSSPUG00000005394LSM310089.216ENSCLAG00000015997LSM310089.216Chinchilla_lanigera
ENSSPUG00000005394LSM310086.275ENSCSAG00000019525-10086.275Chlorocebus_sabaeus
ENSSPUG00000005394LSM310090.196ENSCPBG00000014531LSM310090.196Chrysemys_picta_bellii
ENSSPUG00000005394LSM310074.038ENSCSAVG00000009542-10074.038Ciona_savignyi
ENSSPUG00000005394LSM310088.235ENSCANG00000018782-10088.235Colobus_angolensis_palliatus
ENSSPUG00000005394LSM310086.275ENSCANG00000038037-10086.275Colobus_angolensis_palliatus
ENSSPUG00000005394LSM310089.216ENSCANG00000033944-10089.216Colobus_angolensis_palliatus
ENSSPUG00000005394LSM39878.000ENSCGRG00001011396-10078.000Cricetulus_griseus_chok1gshd
ENSSPUG00000005394LSM39372.917ENSCGRG00001008639-9772.917Cricetulus_griseus_chok1gshd
ENSSPUG00000005394LSM310089.216ENSCGRG00001017598Lsm310089.216Cricetulus_griseus_chok1gshd
ENSSPUG00000005394LSM310089.216ENSCGRG00000016159Lsm310089.216Cricetulus_griseus_crigri
ENSSPUG00000005394LSM39378.947ENSCGRG00000012129-10078.947Cricetulus_griseus_crigri
ENSSPUG00000005394LSM310086.275ENSCSEG00000015071lsm37786.275Cynoglossus_semilaevis
ENSSPUG00000005394LSM310085.294ENSCVAG00000006933lsm310085.294Cyprinodon_variegatus
ENSSPUG00000005394LSM310086.275ENSDARG00000089663lsm310086.275Danio_rerio
ENSSPUG00000005394LSM310089.216ENSDNOG00000030808LSM310089.216Dasypus_novemcinctus
ENSSPUG00000005394LSM310089.216ENSDORG00000006894-10089.216Dipodomys_ordii
ENSSPUG00000005394LSM310072.549ENSDORG00000024490-10072.549Dipodomys_ordii
ENSSPUG00000005394LSM310069.903FBgn0051184LSm310069.903Drosophila_melanogaster
ENSSPUG00000005394LSM310089.216ENSETEG00000016207LSM310089.216Echinops_telfairi
ENSSPUG00000005394LSM310079.412ENSEBUG00000004943lsm310079.412Eptatretus_burgeri
ENSSPUG00000005394LSM310089.216ENSEASG00005015443LSM310089.216Equus_asinus_asinus
ENSSPUG00000005394LSM310089.216ENSECAG00000007803LSM310089.216Equus_caballus
ENSSPUG00000005394LSM310087.255ENSELUG00000018922lsm310087.255Esox_lucius
ENSSPUG00000005394LSM310066.667ENSFCAG00000044344-10066.667Felis_catus
ENSSPUG00000005394LSM310089.216ENSFCAG00000038453LSM310089.216Felis_catus
ENSSPUG00000005394LSM310090.196ENSFALG00000012644LSM310090.196Ficedula_albicollis
ENSSPUG00000005394LSM310089.216ENSFDAG00000011470LSM310089.216Fukomys_damarensis
ENSSPUG00000005394LSM310086.275ENSFHEG00000000876lsm310086.275Fundulus_heteroclitus
ENSSPUG00000005394LSM39387.368ENSGMOG00000011024lsm310087.368Gadus_morhua
ENSSPUG00000005394LSM310086.275ENSGAFG00000013965lsm310086.275Gambusia_affinis
ENSSPUG00000005394LSM310086.275ENSGACG00000003488lsm310086.275Gasterosteus_aculeatus
ENSSPUG00000005394LSM310090.196ENSGAGG00000025707LSM310090.196Gopherus_agassizii
ENSSPUG00000005394LSM310089.216ENSGGOG00000010006LSM310089.216Gorilla_gorilla
ENSSPUG00000005394LSM310086.275ENSHBUG00000022399lsm310086.275Haplochromis_burtoni
ENSSPUG00000005394LSM310072.549ENSHGLG00000015564-10072.549Heterocephalus_glaber_female
ENSSPUG00000005394LSM310089.216ENSHGLG00000000651LSM310089.216Heterocephalus_glaber_female
ENSSPUG00000005394LSM310072.549ENSHGLG00100010658-10072.549Heterocephalus_glaber_male
ENSSPUG00000005394LSM310089.216ENSHGLG00100011343LSM310089.216Heterocephalus_glaber_male
ENSSPUG00000005394LSM310085.294ENSHCOG00000013481lsm310085.294Hippocampus_comes
ENSSPUG00000005394LSM310086.275ENSIPUG00000009207lsm310086.275Ictalurus_punctatus
ENSSPUG00000005394LSM310089.216ENSSTOG00000006842LSM310089.216Ictidomys_tridecemlineatus
ENSSPUG00000005394LSM39967.647ENSJJAG00000018311-10067.647Jaculus_jaculus
ENSSPUG00000005394LSM310082.353ENSJJAG00000012797-10082.353Jaculus_jaculus
ENSSPUG00000005394LSM310089.216ENSJJAG00000017351Lsm310089.216Jaculus_jaculus
ENSSPUG00000005394LSM310085.294ENSKMAG00000015182lsm310085.294Kryptolebias_marmoratus
ENSSPUG00000005394LSM39684.694ENSLBEG00000021292lsm310084.694Labrus_bergylta
ENSSPUG00000005394LSM310088.235ENSLOCG00000013560lsm310088.235Lepisosteus_oculatus
ENSSPUG00000005394LSM310088.350ENSLAFG00000023308LSM310088.350Loxodonta_africana
ENSSPUG00000005394LSM310089.216ENSMFAG00000003185LSM310089.216Macaca_fascicularis
ENSSPUG00000005394LSM310070.588ENSMMUG00000043596-10070.588Macaca_mulatta
ENSSPUG00000005394LSM310089.216ENSMMUG00000023126LSM310089.216Macaca_mulatta
ENSSPUG00000005394LSM39870.000ENSMMUG00000002294-9770.000Macaca_mulatta
ENSSPUG00000005394LSM39973.267ENSMNEG00000037686-9973.267Macaca_nemestrina
ENSSPUG00000005394LSM310089.216ENSMNEG00000043632LSM310089.216Macaca_nemestrina
ENSSPUG00000005394LSM310089.216ENSMLEG00000036162LSM310089.216Mandrillus_leucophaeus
ENSSPUG00000005394LSM310086.275ENSMAMG00000012807lsm310086.275Mastacembelus_armatus
ENSSPUG00000005394LSM310086.275ENSMZEG00005016682lsm37386.275Maylandia_zebra
ENSSPUG00000005394LSM39490.625ENSMGAG00000007776LSM310090.625Meleagris_gallopavo
ENSSPUG00000005394LSM310075.490ENSMICG00000027821-10075.490Microcebus_murinus
ENSSPUG00000005394LSM310088.235ENSMICG00000032361-10088.235Microcebus_murinus
ENSSPUG00000005394LSM310089.216ENSMOCG00000014269Lsm310089.216Microtus_ochrogaster
ENSSPUG00000005394LSM310085.294ENSMMOG00000020715lsm310085.294Mola_mola
ENSSPUG00000005394LSM310088.235ENSMODG00000007275LSM310088.235Monodelphis_domestica
ENSSPUG00000005394LSM310086.275ENSMALG00000006485lsm310086.275Monopterus_albus
ENSSPUG00000005394LSM310089.216ENSMUSG00000034192Lsm310089.216Mus_musculus
ENSSPUG00000005394LSM310089.216MGP_PahariEiJ_G0022402Lsm310089.216Mus_pahari
ENSSPUG00000005394LSM310089.216MGP_SPRETEiJ_G0029681Lsm310089.216Mus_spretus
ENSSPUG00000005394LSM38382.353ENSMPUG00000017256-10082.353Mustela_putorius_furo
ENSSPUG00000005394LSM39778.788ENSMPUG00000019120-9778.788Mustela_putorius_furo
ENSSPUG00000005394LSM310089.216ENSMLUG00000010677LSM310089.216Myotis_lucifugus
ENSSPUG00000005394LSM310083.333ENSMLUG00000024700-10083.333Myotis_lucifugus
ENSSPUG00000005394LSM310089.216ENSNGAG00000022450Lsm310089.216Nannospalax_galili
ENSSPUG00000005394LSM39971.287ENSNGAG00000010207-9971.287Nannospalax_galili
ENSSPUG00000005394LSM310066.667ENSNGAG00000013716-10066.667Nannospalax_galili
ENSSPUG00000005394LSM310086.275ENSNBRG00000014318lsm310086.275Neolamprologus_brichardi
ENSSPUG00000005394LSM310081.373ENSNLEG00000030229-10081.373Nomascus_leucogenys
ENSSPUG00000005394LSM310089.216ENSNLEG00000005079LSM310089.216Nomascus_leucogenys
ENSSPUG00000005394LSM310082.353ENSODEG00000019403-10082.353Octodon_degus
ENSSPUG00000005394LSM310089.216ENSODEG00000001726LSM310089.216Octodon_degus
ENSSPUG00000005394LSM310087.255ENSODEG00000019158-10087.255Octodon_degus
ENSSPUG00000005394LSM310088.235ENSODEG00000019740-10088.235Octodon_degus
ENSSPUG00000005394LSM310086.275ENSONIG00000021369-10086.275Oreochromis_niloticus
ENSSPUG00000005394LSM310086.275ENSONIG00000000370lsm310086.275Oreochromis_niloticus
ENSSPUG00000005394LSM310088.235ENSOANG00000012273LSM310088.235Ornithorhynchus_anatinus
ENSSPUG00000005394LSM310089.216ENSOCUG00000027653-10089.216Oryctolagus_cuniculus
ENSSPUG00000005394LSM310084.314ENSOCUG00000011088-10084.314Oryctolagus_cuniculus
ENSSPUG00000005394LSM310084.314ENSORLG00000025900lsm310084.314Oryzias_latipes
ENSSPUG00000005394LSM310084.314ENSORLG00020007125lsm310084.314Oryzias_latipes_hni
ENSSPUG00000005394LSM310084.314ENSORLG00015002944lsm310084.314Oryzias_latipes_hsok
ENSSPUG00000005394LSM310084.314ENSOMEG00000001915lsm310084.314Oryzias_melastigma
ENSSPUG00000005394LSM39688.776ENSOGAG00000028858-10088.776Otolemur_garnettii
ENSSPUG00000005394LSM310089.216ENSOGAG00000007659-10089.216Otolemur_garnettii
ENSSPUG00000005394LSM310083.333ENSOGAG00000033051-10083.333Otolemur_garnettii
ENSSPUG00000005394LSM310088.350ENSOARG00000000600LSM310088.350Ovis_aries
ENSSPUG00000005394LSM310089.216ENSPPAG00000034074LSM310089.216Pan_paniscus
ENSSPUG00000005394LSM39981.188ENSPPRG00000010610-8981.188Panthera_pardus
ENSSPUG00000005394LSM310088.235ENSPPRG00000020953-10088.235Panthera_pardus
ENSSPUG00000005394LSM310089.216ENSPPRG00000012912-10089.216Panthera_pardus
ENSSPUG00000005394LSM310089.216ENSPTIG00000013072-10089.216Panthera_tigris_altaica
ENSSPUG00000005394LSM310089.216ENSPTIG00000003463-10089.216Panthera_tigris_altaica
ENSSPUG00000005394LSM310089.216ENSPTRG00000014650LSM310089.216Pan_troglodytes
ENSSPUG00000005394LSM310089.216ENSPANG00000009378LSM310089.216Papio_anubis
ENSSPUG00000005394LSM310068.627ENSPANG00000032192-10068.627Papio_anubis
ENSSPUG00000005394LSM310089.216ENSPKIG00000008037lsm39189.216Paramormyrops_kingsleyae
ENSSPUG00000005394LSM310090.196ENSPSIG00000015720LSM310090.196Pelodiscus_sinensis
ENSSPUG00000005394LSM39385.263ENSPMGG00000012103lsm39685.263Periophthalmus_magnuspinnatus
ENSSPUG00000005394LSM310089.216ENSPEMG00000015797Lsm310089.216Peromyscus_maniculatus_bairdii
ENSSPUG00000005394LSM310075.490ENSPEMG00000020213-10075.490Peromyscus_maniculatus_bairdii
ENSSPUG00000005394LSM310086.275ENSPFOG00000008372lsm310086.275Poecilia_formosa
ENSSPUG00000005394LSM310086.275ENSPLAG00000000563lsm310086.275Poecilia_latipinna
ENSSPUG00000005394LSM310086.275ENSPMEG00000022052lsm310086.275Poecilia_mexicana
ENSSPUG00000005394LSM310086.275ENSPREG00000022485lsm310086.275Poecilia_reticulata
ENSSPUG00000005394LSM310089.216ENSPPYG00000013402LSM310089.216Pongo_abelii
ENSSPUG00000005394LSM310089.216ENSPCAG00000017077LSM310089.216Procavia_capensis
ENSSPUG00000005394LSM39471.875ENSPCOG00000014435-9871.875Propithecus_coquereli
ENSSPUG00000005394LSM310088.235ENSPCOG00000016217-10088.235Propithecus_coquereli
ENSSPUG00000005394LSM310089.216ENSPVAG00000016795LSM310089.216Pteropus_vampyrus
ENSSPUG00000005394LSM310086.275ENSPNYG00000009552lsm37386.275Pundamilia_nyererei
ENSSPUG00000005394LSM310088.235ENSPNAG00000023467lsm310088.235Pygocentrus_nattereri
ENSSPUG00000005394LSM310089.216ENSRNOG00000008733Lsm310089.216Rattus_norvegicus
ENSSPUG00000005394LSM310076.471ENSRBIG00000043783-10076.471Rhinopithecus_bieti
ENSSPUG00000005394LSM310089.216ENSRBIG00000034399LSM310089.216Rhinopithecus_bieti
ENSSPUG00000005394LSM310089.216ENSRROG00000033276-10089.216Rhinopithecus_roxellana
ENSSPUG00000005394LSM310074.510ENSRROG00000044056-10074.510Rhinopithecus_roxellana
ENSSPUG00000005394LSM310077.451ENSRROG00000039868-10077.451Rhinopithecus_roxellana
ENSSPUG00000005394LSM310080.392ENSRROG00000044047-10080.392Rhinopithecus_roxellana
ENSSPUG00000005394LSM310089.216ENSSBOG00000024310LSM310089.216Saimiri_boliviensis_boliviensis
ENSSPUG00000005394LSM310088.235ENSSFOG00015007071lsm310088.235Scleropages_formosus
ENSSPUG00000005394LSM310086.275ENSSMAG00000001818lsm310086.275Scophthalmus_maximus
ENSSPUG00000005394LSM310086.275ENSSDUG00000006040lsm310086.275Seriola_dumerili
ENSSPUG00000005394LSM310086.275ENSSLDG00000006399lsm310086.275Seriola_lalandi_dorsalis
ENSSPUG00000005394LSM35789.655ENSSARG00000005275-10089.655Sorex_araneus
ENSSPUG00000005394LSM310076.471ENSSPAG00000000934lsm310076.471Stegastes_partitus
ENSSPUG00000005394LSM39572.165ENSSSCG00000023718-9972.165Sus_scrofa
ENSSPUG00000005394LSM310089.216ENSSSCG00000011601LSM310089.216Sus_scrofa
ENSSPUG00000005394LSM310090.196ENSTGUG00000008327LSM310090.196Taeniopygia_guttata
ENSSPUG00000005394LSM310085.294ENSTRUG00000023175lsm310085.294Takifugu_rubripes
ENSSPUG00000005394LSM310085.294ENSTNIG00000005589lsm310085.294Tetraodon_nigroviridis
ENSSPUG00000005394LSM310079.412ENSTBEG00000001050-9979.412Tupaia_belangeri
ENSSPUG00000005394LSM310089.216ENSTTRG00000011197LSM310089.216Tursiops_truncatus
ENSSPUG00000005394LSM310089.216ENSUAMG00000017250-10089.216Ursus_americanus
ENSSPUG00000005394LSM310089.216ENSUMAG00000015905LSM310089.216Ursus_maritimus
ENSSPUG00000005394LSM39390.526ENSVPAG00000010709LSM310090.526Vicugna_pacos
ENSSPUG00000005394LSM310085.294ENSVVUG00000005684-10085.294Vulpes_vulpes
ENSSPUG00000005394LSM310085.294ENSVVUG00000024228-10085.294Vulpes_vulpes
ENSSPUG00000005394LSM310087.255ENSVVUG00000007332-9187.255Vulpes_vulpes
ENSSPUG00000005394LSM310085.294ENSVVUG00000029294-10085.294Vulpes_vulpes
ENSSPUG00000005394LSM310086.275ENSVVUG00000006481-10086.275Vulpes_vulpes
ENSSPUG00000005394LSM310087.255ENSXETG00000011534lsm310087.255Xenopus_tropicalis
ENSSPUG00000005394LSM310086.275ENSXCOG00000017432LSM310086.275Xiphophorus_couchianus
ENSSPUG00000005394LSM310086.275ENSXMAG00000009151lsm310086.275Xiphophorus_maculatus

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