EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000005427 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 2292 bases
Position: chrQEPC01001916.1:163313-165604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000007015	zf-C2H2	PF00096.26	2.2e-27	1	5
ENSSPUP00000007015	zf-C2H2	PF00096.26	2.2e-27	2	5
ENSSPUP00000007015	zf-C2H2	PF00096.26	2.2e-27	3	5
ENSSPUP00000007015	zf-C2H2	PF00096.26	2.2e-27	4	5
ENSSPUP00000007015	zf-C2H2	PF00096.26	2.2e-27	5	5
ENSSPUP00000007015	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007472	-	807	-	ENSSPUP00000007015	268 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000005427	-	54	40.299	ENSSPUG00000000136	-	91	40.299
ENSSPUG00000005427	-	51	41.558	ENSSPUG00000009898	-	90	38.298
ENSSPUG00000005427	-	54	41.791	ENSSPUG00000010016	-	84	38.060
ENSSPUG00000005427	-	55	39.552	ENSSPUG00000018867	-	88	39.552
ENSSPUG00000005427	-	63	43.396	ENSSPUG00000009941	PRDM5	77	41.538
ENSSPUG00000005427	-	84	41.176	ENSSPUG00000009764	-	61	41.176
ENSSPUG00000005427	-	53	39.773	ENSSPUG00000000229	-	85	39.773
ENSSPUG00000005427	-	72	31.858	ENSSPUG00000001720	OVOL2	62	31.858
ENSSPUG00000005427	-	59	38.938	ENSSPUG00000007064	-	96	38.938
ENSSPUG00000005427	-	56	37.778	ENSSPUG00000007147	-	93	37.778
ENSSPUG00000005427	-	54	40.458	ENSSPUG00000004366	-	56	40.299
ENSSPUG00000005427	-	50	37.931	ENSSPUG00000005307	GTF3A	66	37.931
ENSSPUG00000005427	-	99	70.000	ENSSPUG00000018057	SNAI1	98	68.401
ENSSPUG00000005427	-	54	41.481	ENSSPUG00000010059	-	79	41.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005427	-	99	47.973	ENSG00000185669	SNAI3	99	47.883	Homo_sapiens
ENSSPUG00000005427	-	100	92.910	ENSG00000019549	SNAI2	100	92.910	Homo_sapiens
ENSSPUG00000005427	-	100	94.403	ENSAMEG00000009606	SNAI2	100	94.403	Ailuropoda_melanoleuca
ENSSPUG00000005427	-	99	49.662	ENSANAG00000032748	SNAI3	99	44.625	Aotus_nancymaae
ENSSPUG00000005427	-	100	92.910	ENSANAG00000021163	SNAI2	100	92.910	Aotus_nancymaae
ENSSPUG00000005427	-	99	44.771	ENSBTAG00000017528	SNAI3	99	47.508	Bos_taurus
ENSSPUG00000005427	-	100	89.179	ENSBTAG00000013227	SNAI2	100	89.179	Bos_taurus
ENSSPUG00000005427	-	100	92.910	ENSCJAG00000013499	SNAI2	100	92.910	Callithrix_jacchus
ENSSPUG00000005427	-	100	93.657	ENSCAFG00000006638	SNAI2	100	93.657	Canis_familiaris
ENSSPUG00000005427	-	100	93.657	ENSCAFG00020015384	SNAI2	100	93.657	Canis_lupus_dingo
ENSSPUG00000005427	-	99	46.078	ENSCHIG00000018087	SNAI3	99	45.791	Capra_hircus
ENSSPUG00000005427	-	100	88.806	ENSCHIG00000024410	SNAI2	100	88.806	Capra_hircus
ENSSPUG00000005427	-	90	92.531	ENSTSYG00000030892	SNAI2	90	92.531	Carlito_syrichta
ENSSPUG00000005427	-	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSSPUG00000005427	-	83	91.928	ENSCAPG00000013078	SNAI2	100	91.928	Cavia_aperea
ENSSPUG00000005427	-	100	92.910	ENSCCAG00000024100	SNAI2	100	92.910	Cebus_capucinus
ENSSPUG00000005427	-	100	92.910	ENSCATG00000028656	SNAI2	100	92.910	Cercocebus_atys
ENSSPUG00000005427	-	99	48.208	ENSCATG00000031714	SNAI3	99	48.013	Cercocebus_atys
ENSSPUG00000005427	-	100	92.910	ENSCLAG00000011797	SNAI2	100	92.910	Chinchilla_lanigera
ENSSPUG00000005427	-	100	92.910	ENSCSAG00000014787	SNAI2	100	92.910	Chlorocebus_sabaeus
ENSSPUG00000005427	-	100	98.134	ENSCPBG00000020255	SNAI2	100	98.134	Chrysemys_picta_bellii
ENSSPUG00000005427	-	99	51.155	ENSCPBG00000023474	SNAI3	99	52.027	Chrysemys_picta_bellii
ENSSPUG00000005427	-	50	65.672	ENSCSAVG00000009819	-	81	57.962	Ciona_savignyi
ENSSPUG00000005427	-	100	92.910	ENSCANG00000029656	SNAI2	100	92.910	Colobus_angolensis_palliatus
ENSSPUG00000005427	-	100	91.791	ENSCGRG00001013674	Snai2	100	91.791	Cricetulus_griseus_chok1gshd
ENSSPUG00000005427	-	100	91.791	ENSCGRG00000012119	Snai2	100	91.791	Cricetulus_griseus_crigri
ENSSPUG00000005427	-	78	35.268	ENSDNOG00000035204	-	100	34.375	Dasypus_novemcinctus
ENSSPUG00000005427	-	100	90.672	ENSDORG00000029620	Snai2	100	90.672	Dipodomys_ordii
ENSSPUG00000005427	-	99	47.797	ENSECAG00000012131	SNAI3	99	47.697	Equus_caballus
ENSSPUG00000005427	-	100	82.463	ENSELUG00000021795	SNAI2	79	81.343	Esox_lucius
ENSSPUG00000005427	-	99	55.363	ENSELUG00000018742	-	99	54.266	Esox_lucius
ENSSPUG00000005427	-	99	45.683	ENSFCAG00000043885	SNAI3	99	45.683	Felis_catus
ENSSPUG00000005427	-	89	62.605	ENSFALG00000012974	-	98	65.126	Ficedula_albicollis
ENSSPUG00000005427	-	100	93.657	ENSFDAG00000016958	SNAI2	100	93.657	Fukomys_damarensis
ENSSPUG00000005427	-	100	98.134	ENSGAGG00000000426	SNAI2	100	98.134	Gopherus_agassizii
ENSSPUG00000005427	-	99	50.676	ENSGAGG00000023571	SNAI3	99	51.712	Gopherus_agassizii
ENSSPUG00000005427	-	99	47.883	ENSGGOG00000012559	SNAI3	99	47.557	Gorilla_gorilla
ENSSPUG00000005427	-	100	92.910	ENSGGOG00000000959	SNAI2	100	92.910	Gorilla_gorilla
ENSSPUG00000005427	-	100	72.491	ENSHCOG00000019435	SNAI2	100	74.349	Hippocampus_comes
ENSSPUG00000005427	-	100	70.522	ENSIPUG00000000131	snai2	100	70.149	Ictalurus_punctatus
ENSSPUG00000005427	-	100	94.030	ENSSTOG00000028743	SNAI2	100	94.030	Ictidomys_tridecemlineatus
ENSSPUG00000005427	-	99	47.811	ENSJJAG00000019934	Snai3	99	46.980	Jaculus_jaculus
ENSSPUG00000005427	-	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSSPUG00000005427	-	100	88.806	ENSLOCG00000005992	SNAI2	100	88.806	Lepisosteus_oculatus
ENSSPUG00000005427	-	100	95.149	ENSLAFG00000009299	SNAI2	100	95.149	Loxodonta_africana
ENSSPUG00000005427	-	99	57.565	ENSLAFG00000005117	SNAI3	99	57.565	Loxodonta_africana
ENSSPUG00000005427	-	99	48.534	ENSMFAG00000032064	SNAI3	99	48.852	Macaca_fascicularis
ENSSPUG00000005427	-	100	92.910	ENSMFAG00000046061	SNAI2	100	92.910	Macaca_fascicularis
ENSSPUG00000005427	-	99	48.534	ENSMMUG00000008716	SNAI3	99	48.852	Macaca_mulatta
ENSSPUG00000005427	-	100	92.910	ENSMMUG00000016195	SNAI2	100	92.910	Macaca_mulatta
ENSSPUG00000005427	-	100	92.910	ENSMNEG00000034216	SNAI2	100	92.910	Macaca_nemestrina
ENSSPUG00000005427	-	99	48.534	ENSMNEG00000045515	SNAI3	99	48.675	Macaca_nemestrina
ENSSPUG00000005427	-	100	92.910	ENSMLEG00000034407	SNAI2	100	92.910	Mandrillus_leucophaeus
ENSSPUG00000005427	-	100	91.418	ENSMAUG00000008119	Snai2	100	91.418	Mesocricetus_auratus
ENSSPUG00000005427	-	99	46.488	ENSMAUG00000001685	Snai3	99	46.488	Mesocricetus_auratus
ENSSPUG00000005427	-	100	91.791	ENSMOCG00000006622	Snai2	100	91.791	Microtus_ochrogaster
ENSSPUG00000005427	-	100	95.149	ENSMODG00000010173	SNAI2	100	95.149	Monodelphis_domestica
ENSSPUG00000005427	-	100	91.078	MGP_CAROLIEiJ_G0020483	Snai2	100	91.078	Mus_caroli
ENSSPUG00000005427	-	100	91.078	ENSMUSG00000022676	Snai2	100	91.078	Mus_musculus
ENSSPUG00000005427	-	100	91.078	MGP_PahariEiJ_G0016188	Snai2	100	91.078	Mus_pahari
ENSSPUG00000005427	-	100	91.450	MGP_SPRETEiJ_G0021379	Snai2	100	91.450	Mus_spretus
ENSSPUG00000005427	-	100	94.403	ENSMPUG00000010793	SNAI2	100	94.403	Mustela_putorius_furo
ENSSPUG00000005427	-	99	47.751	ENSMPUG00000008104	SNAI3	99	47.569	Mustela_putorius_furo
ENSSPUG00000005427	-	100	92.910	ENSMLUG00000001086	SNAI2	100	92.910	Myotis_lucifugus
ENSSPUG00000005427	-	99	48.805	ENSNGAG00000023039	Snai3	99	47.811	Nannospalax_galili
ENSSPUG00000005427	-	100	92.910	ENSNLEG00000013421	SNAI2	100	92.910	Nomascus_leucogenys
ENSSPUG00000005427	-	99	49.329	ENSNLEG00000000595	SNAI3	99	49.329	Nomascus_leucogenys
ENSSPUG00000005427	-	97	95.019	ENSMEUG00000009510	SNAI2	100	95.019	Notamacropus_eugenii
ENSSPUG00000005427	-	100	94.403	ENSOANG00000007267	SNAI2	100	94.403	Ornithorhynchus_anatinus
ENSSPUG00000005427	-	99	49.315	ENSOGAG00000000419	SNAI3	99	47.826	Otolemur_garnettii
ENSSPUG00000005427	-	100	88.806	ENSOARG00000013030	SNAI2	100	88.806	Ovis_aries
ENSSPUG00000005427	-	100	92.910	ENSPPAG00000015662	SNAI2	100	92.910	Pan_paniscus
ENSSPUG00000005427	-	99	47.557	ENSPPAG00000043301	SNAI3	99	47.231	Pan_paniscus
ENSSPUG00000005427	-	99	45.985	ENSPPRG00000008511	SNAI3	99	46.209	Panthera_pardus
ENSSPUG00000005427	-	100	94.776	ENSPPRG00000012562	-	100	94.776	Panthera_pardus
ENSSPUG00000005427	-	90	94.628	ENSPTIG00000007593	SNAI2	77	94.628	Panthera_tigris_altaica
ENSSPUG00000005427	-	99	47.883	ENSPTRG00000008460	SNAI3	99	47.557	Pan_troglodytes
ENSSPUG00000005427	-	100	92.910	ENSPTRG00000020235	SNAI2	100	92.910	Pan_troglodytes
ENSSPUG00000005427	-	100	92.910	ENSPANG00000017540	SNAI2	100	92.910	Papio_anubis
ENSSPUG00000005427	-	99	48.534	ENSPANG00000000509	SNAI3	99	48.344	Papio_anubis
ENSSPUG00000005427	-	99	55.017	ENSPKIG00000007872	SNAI3	99	54.325	Paramormyrops_kingsleyae
ENSSPUG00000005427	-	100	86.567	ENSPKIG00000002254	SNAI2	100	86.567	Paramormyrops_kingsleyae
ENSSPUG00000005427	-	100	97.761	ENSPSIG00000016395	SNAI2	100	97.761	Pelodiscus_sinensis
ENSSPUG00000005427	-	75	61.951	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSSPUG00000005427	-	100	79.478	ENSPMGG00000013179	SNAI2	100	77.985	Periophthalmus_magnuspinnatus
ENSSPUG00000005427	-	100	91.418	ENSPEMG00000011739	Snai2	100	91.418	Peromyscus_maniculatus_bairdii
ENSSPUG00000005427	-	100	95.522	ENSPCIG00000025156	SNAI2	100	95.522	Phascolarctos_cinereus
ENSSPUG00000005427	-	90	80.579	ENSPREG00000008528	SNAI2	86	78.926	Poecilia_reticulata
ENSSPUG00000005427	-	99	48.860	ENSPPYG00000007643	SNAI3	99	49.662	Pongo_abelii
ENSSPUG00000005427	-	100	92.910	ENSPPYG00000018578	SNAI2	100	92.910	Pongo_abelii
ENSSPUG00000005427	-	100	94.403	ENSPCOG00000015656	SNAI2	100	94.403	Propithecus_coquereli
ENSSPUG00000005427	-	100	94.030	ENSPVAG00000009457	SNAI2	100	94.030	Pteropus_vampyrus
ENSSPUG00000005427	-	99	47.119	ENSRNOG00000013586	Snai3	99	47.119	Rattus_norvegicus
ENSSPUG00000005427	-	100	92.910	ENSRBIG00000041133	SNAI2	100	92.910	Rhinopithecus_bieti
ENSSPUG00000005427	-	99	50.000	ENSRBIG00000025770	SNAI3	99	49.158	Rhinopithecus_bieti
ENSSPUG00000005427	-	99	49.664	ENSRROG00000032757	SNAI3	99	47.115	Rhinopithecus_roxellana
ENSSPUG00000005427	-	100	92.910	ENSRROG00000032273	SNAI2	100	92.910	Rhinopithecus_roxellana
ENSSPUG00000005427	-	100	92.910	ENSSBOG00000035774	SNAI2	100	92.910	Saimiri_boliviensis_boliviensis
ENSSPUG00000005427	-	100	95.522	ENSSHAG00000004205	SNAI2	100	95.522	Sarcophilus_harrisii
ENSSPUG00000005427	-	99	51.325	ENSSFOG00015016115	snai3	93	50.662	Scleropages_formosus
ENSSPUG00000005427	-	100	84.815	ENSSFOG00015018025	SNAI2	100	84.815	Scleropages_formosus
ENSSPUG00000005427	-	100	91.418	ENSSSCG00000039568	SNAI2	100	91.418	Sus_scrofa
ENSSPUG00000005427	-	86	93.913	ENSUAMG00000014942	SNAI2	100	93.913	Ursus_americanus
ENSSPUG00000005427	-	99	48.505	ENSUAMG00000020030	SNAI3	99	48.837	Ursus_americanus
ENSSPUG00000005427	-	98	93.916	ENSUMAG00000006525	SNAI2	100	93.916	Ursus_maritimus
ENSSPUG00000005427	-	99	48.110	ENSVVUG00000003233	SNAI3	99	47.766	Vulpes_vulpes
ENSSPUG00000005427	-	100	94.030	ENSVVUG00000017625	SNAI2	100	94.030	Vulpes_vulpes
ENSSPUG00000005427	-	100	90.299	ENSXETG00000024006	snai2	100	90.299	Xenopus_tropicalis