EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000005434 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 33921 bases
Position: chrQEPC01010893.1:26077-59997
Accession: 28270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000007039	R3H	PF01424.22	6e-08	1	1
ENSSPUP00000007041	R3H	PF01424.22	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007496	R3HDM4-201	768	-	ENSSPUP00000007039	255 (aa)	-	-
ENSSPUT00000007501	R3HDM4-202	808	-	ENSSPUP00000007041	238 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005434	R3HDM4	93	71.250	ENSG00000198858	R3HDM4	97	68.313	Homo_sapiens
ENSSPUG00000005434	R3HDM4	93	71.667	ENSAMEG00000003001	R3HDM4	98	71.667	Ailuropoda_melanoleuca
ENSSPUG00000005434	R3HDM4	92	62.869	ENSACIG00000004672	r3hdm4	91	62.869	Amphilophus_citrinellus
ENSSPUG00000005434	R3HDM4	91	60.944	ENSATEG00000015913	r3hdm4	91	61.373	Anabas_testudineus
ENSSPUG00000005434	R3HDM4	93	71.250	ENSANAG00000029748	R3HDM4	99	71.250	Aotus_nancymaae
ENSSPUG00000005434	R3HDM4	100	68.872	ENSBTAG00000046406	R3HDM4	93	68.872	Bos_taurus
ENSSPUG00000005434	R3HDM4	96	69.512	ENSCJAG00000020114	R3HDM4	92	69.512	Callithrix_jacchus
ENSSPUG00000005434	R3HDM4	99	68.627	ENSCAFG00000019665	R3HDM4	94	68.627	Canis_familiaris
ENSSPUG00000005434	R3HDM4	99	68.235	ENSCAFG00020016880	R3HDM4	94	68.235	Canis_lupus_dingo
ENSSPUG00000005434	R3HDM4	95	71.193	ENSCHIG00000020110	R3HDM4	92	72.083	Capra_hircus
ENSSPUG00000005434	R3HDM4	93	70.417	ENSCCAG00000019955	R3HDM4	87	70.417	Cebus_capucinus
ENSSPUG00000005434	R3HDM4	93	70.661	ENSCATG00000037269	R3HDM4	90	71.074	Cercocebus_atys
ENSSPUG00000005434	R3HDM4	95	69.136	ENSCLAG00000007094	R3HDM4	99	69.136	Chinchilla_lanigera
ENSSPUG00000005434	R3HDM4	93	72.083	ENSCSAG00000012574	R3HDM4	90	72.083	Chlorocebus_sabaeus
ENSSPUG00000005434	R3HDM4	95	88.430	ENSCPBG00000009805	R3HDM4	92	88.430	Chrysemys_picta_bellii
ENSSPUG00000005434	R3HDM4	95	70.782	ENSCANG00000040439	R3HDM4	85	70.782	Colobus_angolensis_palliatus
ENSSPUG00000005434	R3HDM4	93	68.619	ENSCGRG00001021650	R3hdm4	90	68.619	Cricetulus_griseus_chok1gshd
ENSSPUG00000005434	R3HDM4	93	68.619	ENSCGRG00000013169	R3hdm4	90	68.619	Cricetulus_griseus_crigri
ENSSPUG00000005434	R3HDM4	93	56.904	ENSCSEG00000018211	r3hdm4	92	56.904	Cynoglossus_semilaevis
ENSSPUG00000005434	R3HDM4	93	61.250	ENSCVAG00000017127	r3hdm4	93	61.250	Cyprinodon_variegatus
ENSSPUG00000005434	R3HDM4	98	67.059	ENSDORG00000006605	R3hdm4	99	68.724	Dipodomys_ordii
ENSSPUG00000005434	R3HDM4	99	68.898	ENSEASG00005021556	R3HDM4	88	71.193	Equus_asinus_asinus
ENSSPUG00000005434	R3HDM4	93	72.083	ENSECAG00000000003	R3HDM4	89	72.083	Equus_caballus
ENSSPUG00000005434	R3HDM4	93	73.333	ENSFCAG00000042437	R3HDM4	89	73.333	Felis_catus
ENSSPUG00000005434	R3HDM4	95	82.988	ENSFALG00000013938	R3HDM4	100	82.988	Ficedula_albicollis
ENSSPUG00000005434	R3HDM4	95	68.033	ENSFDAG00000017040	R3HDM4	99	68.033	Fukomys_damarensis
ENSSPUG00000005434	R3HDM4	93	60.417	ENSFHEG00000017636	r3hdm4	93	60.417	Fundulus_heteroclitus
ENSSPUG00000005434	R3HDM4	90	57.391	ENSGMOG00000001231	r3hdm4	94	57.391	Gadus_morhua
ENSSPUG00000005434	R3HDM4	99	79.771	ENSGALG00000001998	R3HDM4	99	79.771	Gallus_gallus
ENSSPUG00000005434	R3HDM4	93	62.917	ENSGAFG00000004173	r3hdm4	93	62.917	Gambusia_affinis
ENSSPUG00000005434	R3HDM4	95	86.777	ENSGAGG00000019698	R3HDM4	92	86.777	Gopherus_agassizii
ENSSPUG00000005434	R3HDM4	93	71.250	ENSGGOG00000008040	R3HDM4	98	71.250	Gorilla_gorilla
ENSSPUG00000005434	R3HDM4	92	62.869	ENSHBUG00000014810	r3hdm4	91	62.869	Haplochromis_burtoni
ENSSPUG00000005434	R3HDM4	95	67.901	ENSHGLG00000016194	R3HDM4	90	67.901	Heterocephalus_glaber_female
ENSSPUG00000005434	R3HDM4	93	61.088	ENSHCOG00000008422	r3hdm4	91	61.088	Hippocampus_comes
ENSSPUG00000005434	R3HDM4	95	59.751	ENSIPUG00000006716	r3hdm4	93	59.751	Ictalurus_punctatus
ENSSPUG00000005434	R3HDM4	93	67.500	ENSSTOG00000023015	R3HDM4	98	67.500	Ictidomys_tridecemlineatus
ENSSPUG00000005434	R3HDM4	99	64.981	ENSJJAG00000012475	R3hdm4	97	64.981	Jaculus_jaculus
ENSSPUG00000005434	R3HDM4	93	61.250	ENSKMAG00000005853	r3hdm4	92	61.250	Kryptolebias_marmoratus
ENSSPUG00000005434	R3HDM4	92	60.759	ENSLBEG00000000730	r3hdm4	91	60.759	Labrus_bergylta
ENSSPUG00000005434	R3HDM4	95	72.614	ENSLACG00000016445	R3HDM4	93	72.614	Latimeria_chalumnae
ENSSPUG00000005434	R3HDM4	93	65.401	ENSLOCG00000002423	r3hdm4	91	65.401	Lepisosteus_oculatus
ENSSPUG00000005434	R3HDM4	93	70.588	ENSLAFG00000017796	R3HDM4	92	70.588	Loxodonta_africana
ENSSPUG00000005434	R3HDM4	93	71.667	ENSMFAG00000044131	R3HDM4	90	71.667	Macaca_fascicularis
ENSSPUG00000005434	R3HDM4	87	72.646	ENSMMUG00000009682	R3HDM4	90	72.646	Macaca_mulatta
ENSSPUG00000005434	R3HDM4	93	71.667	ENSMNEG00000044115	R3HDM4	97	71.667	Macaca_nemestrina
ENSSPUG00000005434	R3HDM4	93	69.835	ENSMLEG00000035693	R3HDM4	89	70.248	Mandrillus_leucophaeus
ENSSPUG00000005434	R3HDM4	95	58.696	ENSMAMG00000005652	r3hdm4	96	57.500	Mastacembelus_armatus
ENSSPUG00000005434	R3HDM4	97	67.331	ENSMAUG00000010611	R3hdm4	97	67.331	Mesocricetus_auratus
ENSSPUG00000005434	R3HDM4	93	70.417	ENSMICG00000010124	R3HDM4	89	70.417	Microcebus_murinus
ENSSPUG00000005434	R3HDM4	93	67.647	ENSMOCG00000002646	R3hdm4	90	68.067	Microtus_ochrogaster
ENSSPUG00000005434	R3HDM4	93	61.250	ENSMMOG00000008253	r3hdm4	93	61.250	Mola_mola
ENSSPUG00000005434	R3HDM4	90	74.672	ENSMODG00000005698	R3HDM4	99	74.672	Monodelphis_domestica
ENSSPUG00000005434	R3HDM4	93	62.083	ENSMALG00000018856	r3hdm4	92	62.083	Monopterus_albus
ENSSPUG00000005434	R3HDM4	99	63.780	MGP_CAROLIEiJ_G0015551	R3hdm4	96	64.961	Mus_caroli
ENSSPUG00000005434	R3HDM4	99	64.173	ENSMUSG00000035781	R3hdm4	96	65.354	Mus_musculus
ENSSPUG00000005434	R3HDM4	99	64.173	MGP_PahariEiJ_G0030964	R3hdm4	96	65.354	Mus_pahari
ENSSPUG00000005434	R3HDM4	99	65.354	MGP_SPRETEiJ_G0016369	-	80	66.142	Mus_spretus
ENSSPUG00000005434	R3HDM4	98	69.170	ENSMPUG00000009394	R3HDM4	94	69.170	Mustela_putorius_furo
ENSSPUG00000005434	R3HDM4	92	62.447	ENSNBRG00000004438	r3hdm4	91	62.447	Neolamprologus_brichardi
ENSSPUG00000005434	R3HDM4	88	68.831	ENSNLEG00000001022	R3HDM4	100	68.831	Nomascus_leucogenys
ENSSPUG00000005434	R3HDM4	92	73.191	ENSMEUG00000011020	R3HDM4	99	73.191	Notamacropus_eugenii
ENSSPUG00000005434	R3HDM4	95	68.313	ENSODEG00000011745	R3HDM4	91	68.033	Octodon_degus
ENSSPUG00000005434	R3HDM4	92	62.869	ENSONIG00000012675	r3hdm4	84	62.869	Oreochromis_niloticus
ENSSPUG00000005434	R3HDM4	93	59.833	ENSOMEG00000003005	r3hdm4	90	59.833	Oryzias_melastigma
ENSSPUG00000005434	R3HDM4	94	69.295	ENSOGAG00000025656	R3HDM4	91	69.295	Otolemur_garnettii
ENSSPUG00000005434	R3HDM4	93	72.083	ENSOARG00000009945	R3HDM4	98	72.083	Ovis_aries
ENSSPUG00000005434	R3HDM4	93	71.250	ENSPPAG00000042371	R3HDM4	98	71.250	Pan_paniscus
ENSSPUG00000005434	R3HDM4	93	71.667	ENSPANG00000015203	R3HDM4	90	71.667	Papio_anubis
ENSSPUG00000005434	R3HDM4	89	61.135	ENSPKIG00000007421	r3hdm4	89	61.017	Paramormyrops_kingsleyae
ENSSPUG00000005434	R3HDM4	93	55.417	ENSPMGG00000020467	r3hdm4	90	55.417	Periophthalmus_magnuspinnatus
ENSSPUG00000005434	R3HDM4	93	69.328	ENSPEMG00000008365	Tmem259	98	69.328	Peromyscus_maniculatus_bairdii
ENSSPUG00000005434	R3HDM4	93	60.000	ENSPFOG00000003199	r3hdm4	93	60.000	Poecilia_formosa
ENSSPUG00000005434	R3HDM4	93	60.000	ENSPMEG00000014183	r3hdm4	93	60.000	Poecilia_mexicana
ENSSPUG00000005434	R3HDM4	93	60.417	ENSPREG00000010709	r3hdm4	93	60.417	Poecilia_reticulata
ENSSPUG00000005434	R3HDM4	93	71.548	ENSPPYG00000009297	R3HDM4	90	71.548	Pongo_abelii
ENSSPUG00000005434	R3HDM4	59	71.053	ENSPCAG00000010997	R3HDM4	56	71.053	Procavia_capensis
ENSSPUG00000005434	R3HDM4	93	70.833	ENSPCOG00000016785	R3HDM4	89	70.833	Propithecus_coquereli
ENSSPUG00000005434	R3HDM4	92	62.869	ENSPNYG00000017489	r3hdm4	91	62.869	Pundamilia_nyererei
ENSSPUG00000005434	R3HDM4	99	64.173	ENSRNOG00000011489	R3hdm4	96	64.567	Rattus_norvegicus
ENSSPUG00000005434	R3HDM4	93	71.250	ENSRROG00000028842	R3HDM4	90	71.250	Rhinopithecus_roxellana
ENSSPUG00000005434	R3HDM4	95	67.611	ENSSBOG00000019298	R3HDM4	72	68.016	Saimiri_boliviensis_boliviensis
ENSSPUG00000005434	R3HDM4	57	77.397	ENSSHAG00000003036	-	100	77.397	Sarcophilus_harrisii
ENSSPUG00000005434	R3HDM4	95	59.504	ENSSFOG00015020574	r3hdm4	88	59.504	Scleropages_formosus
ENSSPUG00000005434	R3HDM4	95	60.606	ENSSMAG00000021090	r3hdm4	68	62.869	Scophthalmus_maximus
ENSSPUG00000005434	R3HDM4	92	62.869	ENSSDUG00000008488	r3hdm4	91	62.869	Seriola_dumerili
ENSSPUG00000005434	R3HDM4	92	62.869	ENSSLDG00000025328	r3hdm4	91	62.869	Seriola_lalandi_dorsalis
ENSSPUG00000005434	R3HDM4	92	60.169	ENSSPAG00000002562	r3hdm4	91	60.169	Stegastes_partitus
ENSSPUG00000005434	R3HDM4	93	72.083	ENSSSCG00000013419	R3HDM4	88	72.083	Sus_scrofa
ENSSPUG00000005434	R3HDM4	86	68.246	ENSTGUG00000000663	R3HDM4	100	68.900	Taeniopygia_guttata
ENSSPUG00000005434	R3HDM4	93	70.417	ENSTTRG00000001470	R3HDM4	98	71.250	Tursiops_truncatus
ENSSPUG00000005434	R3HDM4	87	73.094	ENSUAMG00000005751	R3HDM4	100	73.094	Ursus_americanus
ENSSPUG00000005434	R3HDM4	99	68.627	ENSVVUG00000022685	R3HDM4	94	68.627	Vulpes_vulpes
ENSSPUG00000005434	R3HDM4	93	55.738	ENSXETG00000033624	R3HDM4	93	55.738	Xenopus_tropicalis
ENSSPUG00000005434	R3HDM4	93	60.816	ENSXCOG00000005127	r3hdm4	93	60.816	Xiphophorus_couchianus
ENSSPUG00000005434	R3HDM4	93	61.066	ENSXMAG00000022875	r3hdm4	93	61.066	Xiphophorus_maculatus