EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000005485 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 175408 bases
Position: chrQEPC01014195.1:2457757-2633164
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000007137	XRN_N	PF03159.18	5.1e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007607	XRN2-201	2838	-	ENSSPUP00000007137	945 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000005485	XRN2	59	34.629	ENSSPUG00000010779	-	99	34.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005485	XRN2	96	79.380	ENSG00000088930	XRN2	98	79.274	Homo_sapiens
ENSSPUG00000005485	XRN2	94	68.461	ENSAPOG00000009818	xrn2	97	67.119	Acanthochromis_polyacanthus
ENSSPUG00000005485	XRN2	96	79.915	ENSAMEG00000012581	XRN2	98	79.850	Ailuropoda_melanoleuca
ENSSPUG00000005485	XRN2	88	68.757	ENSACIG00000015047	xrn2	95	76.392	Amphilophus_citrinellus
ENSSPUG00000005485	XRN2	94	69.805	ENSAOCG00000023632	xrn2	97	68.058	Amphiprion_ocellaris
ENSSPUG00000005485	XRN2	94	69.322	ENSAPEG00000014871	xrn2	97	67.954	Amphiprion_percula
ENSSPUG00000005485	XRN2	93	70.033	ENSATEG00000001273	xrn2	98	69.093	Anabas_testudineus
ENSSPUG00000005485	XRN2	93	81.998	ENSAPLG00000013869	XRN2	98	81.778	Anas_platyrhynchos
ENSSPUG00000005485	XRN2	96	82.253	ENSACAG00000005565	XRN2	98	82.253	Anolis_carolinensis
ENSSPUG00000005485	XRN2	96	79.380	ENSANAG00000020126	XRN2	98	79.274	Aotus_nancymaae
ENSSPUG00000005485	XRN2	89	71.724	ENSACLG00000010522	xrn2	96	75.000	Astatotilapia_calliptera
ENSSPUG00000005485	XRN2	95	70.011	ENSAMXG00000018301	xrn2	98	70.011	Astyanax_mexicanus
ENSSPUG00000005485	XRN2	96	79.380	ENSBTAG00000011304	XRN2	98	79.274	Bos_taurus
ENSSPUG00000005485	XRN2	85	52.934	WBGene00006964	xrn-2	89	52.086	Caenorhabditis_elegans
ENSSPUG00000005485	XRN2	96	79.487	ENSCJAG00000005611	XRN2	98	79.380	Callithrix_jacchus
ENSSPUG00000005485	XRN2	96	80.021	ENSCAFG00000005185	XRN2	98	79.957	Canis_familiaris
ENSSPUG00000005485	XRN2	96	80.021	ENSCAFG00020027479	XRN2	98	79.957	Canis_lupus_dingo
ENSSPUG00000005485	XRN2	99	77.353	ENSCHIG00000006921	XRN2	98	79.167	Capra_hircus
ENSSPUG00000005485	XRN2	96	79.380	ENSTSYG00000008315	XRN2	98	79.274	Carlito_syrichta
ENSSPUG00000005485	XRN2	93	67.947	ENSCAPG00000010773	XRN2	97	66.630	Cavia_aperea
ENSSPUG00000005485	XRN2	96	79.594	ENSCPOG00000009407	XRN2	98	79.487	Cavia_porcellus
ENSSPUG00000005485	XRN2	96	79.594	ENSCATG00000040350	XRN2	99	79.211	Cercocebus_atys
ENSSPUG00000005485	XRN2	96	80.342	ENSCLAG00000013419	XRN2	98	80.235	Chinchilla_lanigera
ENSSPUG00000005485	XRN2	96	79.594	ENSCSAG00000011094	XRN2	98	79.487	Chlorocebus_sabaeus
ENSSPUG00000005485	XRN2	64	94.086	ENSCHOG00000013404	XRN2	68	94.086	Choloepus_hoffmanni
ENSSPUG00000005485	XRN2	96	87.327	ENSCPBG00000023533	XRN2	98	87.418	Chrysemys_picta_bellii
ENSSPUG00000005485	XRN2	84	58.542	ENSCING00000022336	-	100	58.901	Ciona_intestinalis
ENSSPUG00000005485	XRN2	85	57.109	ENSCSAVG00000011217	-	100	62.500	Ciona_savignyi
ENSSPUG00000005485	XRN2	96	79.594	ENSCANG00000040240	XRN2	98	79.487	Colobus_angolensis_palliatus
ENSSPUG00000005485	XRN2	96	78.655	ENSCGRG00001010676	Xrn2	99	79.189	Cricetulus_griseus_chok1gshd
ENSSPUG00000005485	XRN2	93	77.875	ENSCGRG00000006378	Xrn2	98	78.423	Cricetulus_griseus_crigri
ENSSPUG00000005485	XRN2	54	74.414	ENSCSEG00000005628	xrn2	100	74.414	Cynoglossus_semilaevis
ENSSPUG00000005485	XRN2	88	73.303	ENSCVAG00000018999	xrn2	98	79.087	Cyprinodon_variegatus
ENSSPUG00000005485	XRN2	94	69.733	ENSDARG00000101900	xrn2	96	79.350	Danio_rerio
ENSSPUG00000005485	XRN2	96	79.380	ENSDNOG00000001895	XRN2	98	79.274	Dasypus_novemcinctus
ENSSPUG00000005485	XRN2	96	78.671	ENSDORG00000005434	Xrn2	98	78.671	Dipodomys_ordii
ENSSPUG00000005485	XRN2	85	53.438	FBgn0031868	Rat1	97	49.785	Drosophila_melanogaster
ENSSPUG00000005485	XRN2	89	88.321	ENSETEG00000001740	XRN2	92	88.321	Echinops_telfairi
ENSSPUG00000005485	XRN2	83	68.242	ENSEBUG00000016136	xrn2	100	68.242	Eptatretus_burgeri
ENSSPUG00000005485	XRN2	96	79.380	ENSEASG00005002484	XRN2	98	79.314	Equus_asinus_asinus
ENSSPUG00000005485	XRN2	90	88.000	ENSECAG00000018988	XRN2	94	88.000	Equus_caballus
ENSSPUG00000005485	XRN2	74	88.000	ENSEEUG00000009265	XRN2	76	88.000	Erinaceus_europaeus
ENSSPUG00000005485	XRN2	94	71.183	ENSELUG00000000552	xrn2	97	69.948	Esox_lucius
ENSSPUG00000005485	XRN2	96	79.701	ENSFCAG00000007970	XRN2	98	79.636	Felis_catus
ENSSPUG00000005485	XRN2	96	81.323	ENSFALG00000004508	XRN2	98	81.217	Ficedula_albicollis
ENSSPUG00000005485	XRN2	96	79.701	ENSFDAG00000016311	XRN2	98	79.594	Fukomys_damarensis
ENSSPUG00000005485	XRN2	54	72.190	ENSFHEG00000013039	xrn2	98	72.190	Fundulus_heteroclitus
ENSSPUG00000005485	XRN2	84	72.121	ENSGMOG00000013436	xrn2	100	72.121	Gadus_morhua
ENSSPUG00000005485	XRN2	96	82.177	ENSGALG00000008372	XRN2	98	82.070	Gallus_gallus
ENSSPUG00000005485	XRN2	88	72.769	ENSGAFG00000014284	xrn2	92	80.049	Gambusia_affinis
ENSSPUG00000005485	XRN2	85	73.918	ENSGACG00000011870	xrn2	96	80.577	Gasterosteus_aculeatus
ENSSPUG00000005485	XRN2	96	87.220	ENSGAGG00000004884	XRN2	98	87.220	Gopherus_agassizii
ENSSPUG00000005485	XRN2	96	79.594	ENSGGOG00000013738	XRN2	98	79.487	Gorilla_gorilla
ENSSPUG00000005485	XRN2	54	75.908	ENSHBUG00000005077	xrn2	96	75.000	Haplochromis_burtoni
ENSSPUG00000005485	XRN2	96	78.739	ENSHGLG00000014831	XRN2	98	78.526	Heterocephalus_glaber_female
ENSSPUG00000005485	XRN2	96	78.739	ENSHGLG00100013130	XRN2	98	78.526	Heterocephalus_glaber_male
ENSSPUG00000005485	XRN2	96	67.079	ENSHCOG00000011994	xrn2	98	67.425	Hippocampus_comes
ENSSPUG00000005485	XRN2	95	67.842	ENSIPUG00000006639	xrn2	98	67.842	Ictalurus_punctatus
ENSSPUG00000005485	XRN2	96	80.021	ENSSTOG00000000589	XRN2	98	79.915	Ictidomys_tridecemlineatus
ENSSPUG00000005485	XRN2	96	79.167	ENSJJAG00000022128	Xrn2	98	79.060	Jaculus_jaculus
ENSSPUG00000005485	XRN2	54	81.712	ENSLBEG00000010041	xrn2	100	81.712	Labrus_bergylta
ENSSPUG00000005485	XRN2	94	72.786	ENSLACG00000008307	XRN2	98	77.531	Latimeria_chalumnae
ENSSPUG00000005485	XRN2	96	70.075	ENSLOCG00000016874	xrn2	98	70.075	Lepisosteus_oculatus
ENSSPUG00000005485	XRN2	96	79.100	ENSLAFG00000014624	XRN2	98	78.992	Loxodonta_africana
ENSSPUG00000005485	XRN2	96	79.594	ENSMFAG00000038122	XRN2	98	79.487	Macaca_fascicularis
ENSSPUG00000005485	XRN2	96	79.594	ENSMMUG00000011405	XRN2	98	79.487	Macaca_mulatta
ENSSPUG00000005485	XRN2	96	79.701	ENSMNEG00000040626	XRN2	98	79.594	Macaca_nemestrina
ENSSPUG00000005485	XRN2	96	79.594	ENSMLEG00000041897	XRN2	98	79.487	Mandrillus_leucophaeus
ENSSPUG00000005485	XRN2	93	70.724	ENSMAMG00000008633	xrn2	97	69.862	Mastacembelus_armatus
ENSSPUG00000005485	XRN2	89	73.678	ENSMZEG00005022362	xrn2	97	73.678	Maylandia_zebra
ENSSPUG00000005485	XRN2	96	81.828	ENSMGAG00000003196	XRN2	98	81.722	Meleagris_gallopavo
ENSSPUG00000005485	XRN2	96	79.380	ENSMAUG00000021842	Xrn2	98	79.274	Mesocricetus_auratus
ENSSPUG00000005485	XRN2	96	79.487	ENSMICG00000008126	XRN2	98	79.380	Microcebus_murinus
ENSSPUG00000005485	XRN2	96	78.846	ENSMOCG00000012588	Xrn2	98	79.380	Microtus_ochrogaster
ENSSPUG00000005485	XRN2	88	72.790	ENSMMOG00000017576	xrn2	96	75.758	Mola_mola
ENSSPUG00000005485	XRN2	96	81.438	ENSMODG00000006163	XRN2	98	81.223	Monodelphis_domestica
ENSSPUG00000005485	XRN2	88	72.018	ENSMALG00000011355	xrn2	95	78.817	Monopterus_albus
ENSSPUG00000005485	XRN2	96	78.846	MGP_CAROLIEiJ_G0024400	Xrn2	98	78.739	Mus_caroli
ENSSPUG00000005485	XRN2	96	79.060	ENSMUSG00000027433	Xrn2	98	78.953	Mus_musculus
ENSSPUG00000005485	XRN2	96	78.953	MGP_PahariEiJ_G0025843	Xrn2	98	78.846	Mus_pahari
ENSSPUG00000005485	XRN2	96	79.060	MGP_SPRETEiJ_G0025318	Xrn2	94	90.164	Mus_spretus
ENSSPUG00000005485	XRN2	96	78.526	ENSMPUG00000001198	XRN2	91	78.421	Mustela_putorius_furo
ENSSPUG00000005485	XRN2	96	79.636	ENSMLUG00000001536	XRN2	98	79.528	Myotis_lucifugus
ENSSPUG00000005485	XRN2	96	79.380	ENSNGAG00000018138	Xrn2	98	79.274	Nannospalax_galili
ENSSPUG00000005485	XRN2	89	73.933	ENSNBRG00000008062	xrn2	96	75.000	Neolamprologus_brichardi
ENSSPUG00000005485	XRN2	96	79.487	ENSNLEG00000009991	XRN2	98	79.380	Nomascus_leucogenys
ENSSPUG00000005485	XRN2	52	91.111	ENSMEUG00000008622	-	65	91.111	Notamacropus_eugenii
ENSSPUG00000005485	XRN2	65	75.916	ENSOPRG00000001397	-	68	75.916	Ochotona_princeps
ENSSPUG00000005485	XRN2	94	76.562	ENSODEG00000000860	-	98	76.897	Octodon_degus
ENSSPUG00000005485	XRN2	96	80.449	ENSODEG00000010745	-	98	80.342	Octodon_degus
ENSSPUG00000005485	XRN2	94	70.098	ENSONIG00000018720	xrn2	97	69.158	Oreochromis_niloticus
ENSSPUG00000005485	XRN2	96	81.876	ENSOANG00000015673	XRN2	98	81.770	Ornithorhynchus_anatinus
ENSSPUG00000005485	XRN2	96	79.808	ENSOCUG00000013468	XRN2	98	79.701	Oryctolagus_cuniculus
ENSSPUG00000005485	XRN2	94	69.775	ENSORLG00000017213	xrn2	97	73.041	Oryzias_latipes
ENSSPUG00000005485	XRN2	94	69.892	ENSORLG00020001824	xrn2	96	69.892	Oryzias_latipes_hni
ENSSPUG00000005485	XRN2	94	69.817	ENSORLG00015019747	xrn2	96	69.785	Oryzias_latipes_hsok
ENSSPUG00000005485	XRN2	95	68.565	ENSOMEG00000019820	xrn2	97	68.875	Oryzias_melastigma
ENSSPUG00000005485	XRN2	96	78.632	ENSOGAG00000001068	XRN2	98	78.526	Otolemur_garnettii
ENSSPUG00000005485	XRN2	93	78.924	ENSOARG00000004443	XRN2	98	78.814	Ovis_aries
ENSSPUG00000005485	XRN2	96	79.594	ENSPPAG00000033549	XRN2	98	79.487	Pan_paniscus
ENSSPUG00000005485	XRN2	96	79.701	ENSPPRG00000008732	XRN2	98	79.636	Panthera_pardus
ENSSPUG00000005485	XRN2	93	79.473	ENSPTIG00000015683	XRN2	95	79.405	Panthera_tigris_altaica
ENSSPUG00000005485	XRN2	96	79.594	ENSPTRG00000013308	XRN2	98	79.487	Pan_troglodytes
ENSSPUG00000005485	XRN2	96	79.616	ENSPANG00000018088	XRN2	98	79.487	Papio_anubis
ENSSPUG00000005485	XRN2	90	73.690	ENSPKIG00000016889	xrn2	96	70.714	Paramormyrops_kingsleyae
ENSSPUG00000005485	XRN2	79	88.932	ENSPSIG00000014666	XRN2	100	88.932	Pelodiscus_sinensis
ENSSPUG00000005485	XRN2	96	78.632	ENSPEMG00000000111	Xrn2	98	78.526	Peromyscus_maniculatus_bairdii
ENSSPUG00000005485	XRN2	95	69.444	ENSPFOG00000004182	xrn2	97	69.584	Poecilia_formosa
ENSSPUG00000005485	XRN2	88	73.117	ENSPLAG00000007351	xrn2	96	73.117	Poecilia_latipinna
ENSSPUG00000005485	XRN2	90	67.861	ENSPMEG00000011798	xrn2	97	67.861	Poecilia_mexicana
ENSSPUG00000005485	XRN2	88	72.842	ENSPREG00000012452	xrn2	97	72.842	Poecilia_reticulata
ENSSPUG00000005485	XRN2	96	79.167	ENSPPYG00000010755	XRN2	98	79.060	Pongo_abelii
ENSSPUG00000005485	XRN2	96	74.708	ENSPCAG00000011191	XRN2	98	74.443	Procavia_capensis
ENSSPUG00000005485	XRN2	96	72.543	ENSPCOG00000016468	XRN2	98	72.436	Propithecus_coquereli
ENSSPUG00000005485	XRN2	88	73.599	ENSPVAG00000004596	XRN2	90	73.599	Pteropus_vampyrus
ENSSPUG00000005485	XRN2	89	71.724	ENSPNYG00000001765	xrn2	97	71.724	Pundamilia_nyererei
ENSSPUG00000005485	XRN2	95	69.780	ENSPNAG00000010956	xrn2	97	69.780	Pygocentrus_nattereri
ENSSPUG00000005485	XRN2	96	78.739	ENSRNOG00000011785	Xrn2	98	79.274	Rattus_norvegicus
ENSSPUG00000005485	XRN2	84	83.415	ENSRBIG00000036193	XRN2	100	83.415	Rhinopithecus_bieti
ENSSPUG00000005485	XRN2	96	79.636	ENSRROG00000044400	XRN2	88	79.528	Rhinopithecus_roxellana
ENSSPUG00000005485	XRN2	66	51.786	YOR048C	RAT1	58	54.237	Saccharomyces_cerevisiae
ENSSPUG00000005485	XRN2	96	79.594	ENSSBOG00000021014	XRN2	98	79.487	Saimiri_boliviensis_boliviensis
ENSSPUG00000005485	XRN2	95	70.842	ENSSFOG00015001091	xrn2	98	71.036	Scleropages_formosus
ENSSPUG00000005485	XRN2	88	74.018	ENSSMAG00000007834	xrn2	97	69.643	Scophthalmus_maximus
ENSSPUG00000005485	XRN2	94	68.364	ENSSDUG00000012802	xrn2	99	70.662	Seriola_dumerili
ENSSPUG00000005485	XRN2	88	73.023	ENSSLDG00000021273	xrn2	97	73.023	Seriola_lalandi_dorsalis
ENSSPUG00000005485	XRN2	60	89.189	ENSSARG00000005859	-	67	89.189	Sorex_araneus
ENSSPUG00000005485	XRN2	95	70.053	ENSSPAG00000016027	xrn2	96	68.803	Stegastes_partitus
ENSSPUG00000005485	XRN2	96	78.739	ENSSSCG00000007109	XRN2	98	78.632	Sus_scrofa
ENSSPUG00000005485	XRN2	96	80.298	ENSTGUG00000007535	XRN2	98	80.085	Taeniopygia_guttata
ENSSPUG00000005485	XRN2	93	69.290	ENSTRUG00000015489	xrn2	93	69.089	Takifugu_rubripes
ENSSPUG00000005485	XRN2	88	71.875	ENSTNIG00000010712	xrn2	89	71.875	Tetraodon_nigroviridis
ENSSPUG00000005485	XRN2	96	78.632	ENSTBEG00000004119	XRN2	98	79.167	Tupaia_belangeri
ENSSPUG00000005485	XRN2	89	87.971	ENSTTRG00000009087	XRN2	91	87.971	Tursiops_truncatus
ENSSPUG00000005485	XRN2	96	80.128	ENSUAMG00000024634	XRN2	98	80.064	Ursus_americanus
ENSSPUG00000005485	XRN2	93	79.736	ENSUMAG00000004012	XRN2	93	79.626	Ursus_maritimus
ENSSPUG00000005485	XRN2	78	90.939	ENSVPAG00000010694	XRN2	83	90.939	Vicugna_pacos
ENSSPUG00000005485	XRN2	96	80.128	ENSVVUG00000012178	XRN2	98	80.064	Vulpes_vulpes
ENSSPUG00000005485	XRN2	94	71.672	ENSXETG00000023501	xrn2	98	72.756	Xenopus_tropicalis
ENSSPUG00000005485	XRN2	95	68.532	ENSXMAG00000000242	xrn2	92	80.292	Xiphophorus_maculatus