EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000005786 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 32490 bases
Position: chrQEPC01012768.1:1770252-1802741
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000007473	RNA_pol_L_2	PF13656.6	2.3e-28	1	1
ENSSPUP00000007478	RNA_pol_L_2	PF13656.6	3.3e-28	1	1
ENSSPUP00000007473	RNA_pol_L	PF01193.24	6.2e-12	1	1
ENSSPUP00000007478	RNA_pol_L	PF01193.24	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000007962	POLR1D-201	636	-	ENSSPUP00000007473	117 (aa)	-	-
ENSSPUT00000007967	POLR1D-202	630	-	ENSSPUP00000007478	140 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000005786	POLR1D	78	31.868	ENSSPUG00000010802	-	80	30.851

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005786	POLR1D	95	72.072	ENSG00000186184	POLR1D	91	75.238	Homo_sapiens
ENSSPUG00000005786	POLR1D	85	71.717	ENSAPOG00000021882	polr1d	88	75.269	Acanthochromis_polyacanthus
ENSSPUG00000005786	POLR1D	95	72.973	ENSAMEG00000019095	POLR1D	84	76.190	Ailuropoda_melanoleuca
ENSSPUG00000005786	POLR1D	95	70.536	ENSACIG00000013328	polr1d	92	73.585	Amphilophus_citrinellus
ENSSPUG00000005786	POLR1D	95	69.369	ENSAOCG00000018500	polr1d	92	72.381	Amphiprion_ocellaris
ENSSPUG00000005786	POLR1D	95	69.369	ENSAPEG00000009489	polr1d	92	72.381	Amphiprion_percula
ENSSPUG00000005786	POLR1D	95	69.369	ENSATEG00000019322	polr1d	92	72.381	Anabas_testudineus
ENSSPUG00000005786	POLR1D	97	78.947	ENSACAG00000015753	POLR1D	90	82.692	Anolis_carolinensis
ENSSPUG00000005786	POLR1D	95	72.072	ENSANAG00000024486	POLR1D	79	75.238	Aotus_nancymaae
ENSSPUG00000005786	POLR1D	95	72.973	ENSACLG00000023805	polr1d	92	76.190	Astatotilapia_calliptera
ENSSPUG00000005786	POLR1D	95	67.568	ENSAMXG00000036118	polr1d	99	64.348	Astyanax_mexicanus
ENSSPUG00000005786	POLR1D	95	72.072	ENSBTAG00000033252	-	79	75.238	Bos_taurus
ENSSPUG00000005786	POLR1D	95	72.072	ENSBTAG00000008642	POLR1D	79	75.238	Bos_taurus
ENSSPUG00000005786	POLR1D	75	38.636	WBGene00010230	rpac-19	61	38.636	Caenorhabditis_elegans
ENSSPUG00000005786	POLR1D	95	72.072	ENSCJAG00000044669	POLR1D	79	75.238	Callithrix_jacchus
ENSSPUG00000005786	POLR1D	95	72.973	ENSCAFG00000006755	POLR1D	79	76.190	Canis_familiaris
ENSSPUG00000005786	POLR1D	95	72.973	ENSCHIG00000021910	POLR1D	79	76.190	Capra_hircus
ENSSPUG00000005786	POLR1D	95	71.171	ENSTSYG00000026817	-	79	74.286	Carlito_syrichta
ENSSPUG00000005786	POLR1D	91	62.037	ENSTSYG00000034852	-	84	64.706	Carlito_syrichta
ENSSPUG00000005786	POLR1D	56	66.154	ENSCAPG00000006058	-	66	66.154	Cavia_aperea
ENSSPUG00000005786	POLR1D	58	63.235	ENSCPOG00000030450	-	70	62.319	Cavia_porcellus
ENSSPUG00000005786	POLR1D	100	52.137	ENSCCAG00000020191	-	87	55.769	Cebus_capucinus
ENSSPUG00000005786	POLR1D	95	72.072	ENSCCAG00000021349	-	79	75.238	Cebus_capucinus
ENSSPUG00000005786	POLR1D	95	72.973	ENSCATG00000030710	-	79	76.190	Cercocebus_atys
ENSSPUG00000005786	POLR1D	95	63.063	ENSCATG00000022900	-	78	65.714	Cercocebus_atys
ENSSPUG00000005786	POLR1D	95	72.973	ENSCLAG00000017623	POLR1D	85	76.190	Chinchilla_lanigera
ENSSPUG00000005786	POLR1D	84	82.653	ENSCPBG00000004719	POLR1D	90	86.813	Chrysemys_picta_bellii
ENSSPUG00000005786	POLR1D	95	70.270	ENSCANG00000037694	-	79	73.333	Colobus_angolensis_palliatus
ENSSPUG00000005786	POLR1D	95	72.973	ENSCANG00000028632	-	79	76.190	Colobus_angolensis_palliatus
ENSSPUG00000005786	POLR1D	95	71.171	ENSCGRG00001021251	Polr1d	79	74.286	Cricetulus_griseus_chok1gshd
ENSSPUG00000005786	POLR1D	95	71.171	ENSCGRG00000011639	Polr1d	79	74.286	Cricetulus_griseus_crigri
ENSSPUG00000005786	POLR1D	93	71.560	ENSCSEG00000018268	polr1d	87	72.549	Cynoglossus_semilaevis
ENSSPUG00000005786	POLR1D	95	70.270	ENSCVAG00000018527	polr1d	92	73.333	Cyprinodon_variegatus
ENSSPUG00000005786	POLR1D	92	67.593	ENSDARG00000037570	polr1d	91	69.608	Danio_rerio
ENSSPUG00000005786	POLR1D	91	72.642	ENSDNOG00000046247	-	75	76.000	Dasypus_novemcinctus
ENSSPUG00000005786	POLR1D	91	73.585	ENSDNOG00000043676	-	75	77.000	Dasypus_novemcinctus
ENSSPUG00000005786	POLR1D	95	70.270	ENSDORG00000029155	Polr1d	79	73.333	Dipodomys_ordii
ENSSPUG00000005786	POLR1D	95	43.243	FBgn0086447	l(2)37Cg	94	37.600	Drosophila_melanogaster
ENSSPUG00000005786	POLR1D	95	72.973	ENSETEG00000012797	POLR1D	85	76.190	Echinops_telfairi
ENSSPUG00000005786	POLR1D	82	66.667	ENSEBUG00000011748	polr1d	70	63.366	Eptatretus_burgeri
ENSSPUG00000005786	POLR1D	91	75.472	ENSEASG00005022487	POLR1D	78	79.000	Equus_asinus_asinus
ENSSPUG00000005786	POLR1D	95	72.973	ENSEEUG00000013144	POLR1D	85	76.190	Erinaceus_europaeus
ENSSPUG00000005786	POLR1D	88	71.845	ENSELUG00000005105	rpac2	87	74.747	Esox_lucius
ENSSPUG00000005786	POLR1D	95	72.973	ENSFCAG00000030162	POLR1D	79	76.190	Felis_catus
ENSSPUG00000005786	POLR1D	85	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSSPUG00000005786	POLR1D	95	71.171	ENSFDAG00000004463	POLR1D	79	74.286	Fukomys_damarensis
ENSSPUG00000005786	POLR1D	96	72.321	ENSFHEG00000015410	polr1d	91	75.238	Fundulus_heteroclitus
ENSSPUG00000005786	POLR1D	59	68.116	ENSGALG00000007470	POLR1D	68	68.116	Gallus_gallus
ENSSPUG00000005786	POLR1D	95	70.270	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSSPUG00000005786	POLR1D	91	70.755	ENSGACG00000018585	polr1d	85	74.000	Gasterosteus_aculeatus
ENSSPUG00000005786	POLR1D	96	81.250	ENSGAGG00000008503	POLR1D	92	84.762	Gopherus_agassizii
ENSSPUG00000005786	POLR1D	95	72.072	ENSGGOG00000004235	POLR1D	79	75.238	Gorilla_gorilla
ENSSPUG00000005786	POLR1D	95	72.973	ENSHBUG00000002111	polr1d	92	76.190	Haplochromis_burtoni
ENSSPUG00000005786	POLR1D	95	70.270	ENSHGLG00000003202	POLR1D	79	73.333	Heterocephalus_glaber_female
ENSSPUG00000005786	POLR1D	95	70.270	ENSHGLG00100009393	POLR1D	79	73.333	Heterocephalus_glaber_male
ENSSPUG00000005786	POLR1D	95	70.270	ENSHCOG00000003258	polr1d	93	72.642	Hippocampus_comes
ENSSPUG00000005786	POLR1D	95	69.369	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSSPUG00000005786	POLR1D	95	72.072	ENSSTOG00000013877	POLR1D	79	75.238	Ictidomys_tridecemlineatus
ENSSPUG00000005786	POLR1D	95	55.856	ENSJJAG00000021667	-	61	58.095	Jaculus_jaculus
ENSSPUG00000005786	POLR1D	93	71.429	ENSJJAG00000022671	-	88	74.528	Jaculus_jaculus
ENSSPUG00000005786	POLR1D	100	68.376	ENSKMAG00000015256	polr1d	91	73.077	Kryptolebias_marmoratus
ENSSPUG00000005786	POLR1D	95	72.072	ENSLBEG00000015919	polr1d	92	75.238	Labrus_bergylta
ENSSPUG00000005786	POLR1D	90	70.476	ENSLACG00000006810	POLR1D	87	70.476	Latimeria_chalumnae
ENSSPUG00000005786	POLR1D	59	81.159	ENSLOCG00000014976	polr1d	85	87.302	Lepisosteus_oculatus
ENSSPUG00000005786	POLR1D	91	75.472	ENSLAFG00000032290	POLR1D	75	79.000	Loxodonta_africana
ENSSPUG00000005786	POLR1D	95	72.973	ENSMFAG00000045264	POLR1D	81	76.190	Macaca_fascicularis
ENSSPUG00000005786	POLR1D	97	57.522	ENSMMUG00000041570	-	77	69.767	Macaca_mulatta
ENSSPUG00000005786	POLR1D	95	72.973	ENSMMUG00000020386	POLR1D	91	76.190	Macaca_mulatta
ENSSPUG00000005786	POLR1D	95	72.973	ENSMNEG00000008630	-	79	76.190	Macaca_nemestrina
ENSSPUG00000005786	POLR1D	97	55.172	ENSMNEG00000038120	-	80	61.165	Macaca_nemestrina
ENSSPUG00000005786	POLR1D	95	72.973	ENSMLEG00000041048	-	79	76.190	Mandrillus_leucophaeus
ENSSPUG00000005786	POLR1D	95	63.063	ENSMLEG00000032251	-	78	65.714	Mandrillus_leucophaeus
ENSSPUG00000005786	POLR1D	85	74.000	ENSMAMG00000014834	polr1d	88	77.660	Mastacembelus_armatus
ENSSPUG00000005786	POLR1D	85	76.768	ENSMZEG00005006638	polr1d	82	80.645	Maylandia_zebra
ENSSPUG00000005786	POLR1D	79	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSSPUG00000005786	POLR1D	95	71.171	ENSMAUG00000001946	Polr1d	79	74.286	Mesocricetus_auratus
ENSSPUG00000005786	POLR1D	95	72.072	ENSMICG00000016883	-	79	75.238	Microcebus_murinus
ENSSPUG00000005786	POLR1D	95	59.459	ENSMICG00000007349	-	78	61.905	Microcebus_murinus
ENSSPUG00000005786	POLR1D	95	70.270	ENSMOCG00000021288	Polr1d	79	73.333	Microtus_ochrogaster
ENSSPUG00000005786	POLR1D	95	70.270	ENSMMOG00000009605	polr1d	92	73.333	Mola_mola
ENSSPUG00000005786	POLR1D	96	75.893	ENSMODG00000023881	POLR1D	92	79.048	Monodelphis_domestica
ENSSPUG00000005786	POLR1D	95	67.568	ENSMALG00000010652	polr1d	92	70.476	Monopterus_albus
ENSSPUG00000005786	POLR1D	95	69.369	MGP_CAROLIEiJ_G0028034	Polr1d	79	72.381	Mus_caroli
ENSSPUG00000005786	POLR1D	95	69.369	ENSMUSG00000029642	Polr1d	79	72.381	Mus_musculus
ENSSPUG00000005786	POLR1D	91	71.698	MGP_PahariEiJ_G0024600	Polr1d	75	75.000	Mus_pahari
ENSSPUG00000005786	POLR1D	95	70.270	MGP_SPRETEiJ_G0029032	Polr1d	79	73.333	Mus_spretus
ENSSPUG00000005786	POLR1D	90	71.429	ENSMLUG00000004118	-	79	71.429	Myotis_lucifugus
ENSSPUG00000005786	POLR1D	95	72.072	ENSMLUG00000027169	-	79	75.238	Myotis_lucifugus
ENSSPUG00000005786	POLR1D	95	71.171	ENSNGAG00000006014	Polr1d	91	74.286	Nannospalax_galili
ENSSPUG00000005786	POLR1D	95	72.973	ENSNBRG00000020327	polr1d	92	76.190	Neolamprologus_brichardi
ENSSPUG00000005786	POLR1D	95	72.072	ENSNLEG00000000358	POLR1D	79	75.238	Nomascus_leucogenys
ENSSPUG00000005786	POLR1D	100	57.265	ENSODEG00000014801	-	82	63.636	Octodon_degus
ENSSPUG00000005786	POLR1D	95	72.973	ENSODEG00000005294	-	79	76.190	Octodon_degus
ENSSPUG00000005786	POLR1D	91	81.132	ENSOANG00000008708	-	92	84.848	Ornithorhynchus_anatinus
ENSSPUG00000005786	POLR1D	95	72.072	ENSOCUG00000015706	POLR1D	64	75.238	Oryctolagus_cuniculus
ENSSPUG00000005786	POLR1D	89	74.038	ENSORLG00000010257	polr1d	91	74.038	Oryzias_latipes
ENSSPUG00000005786	POLR1D	89	74.038	ENSORLG00020000533	polr1d	70	74.038	Oryzias_latipes_hni
ENSSPUG00000005786	POLR1D	89	75.000	ENSORLG00015013267	polr1d	69	75.000	Oryzias_latipes_hsok
ENSSPUG00000005786	POLR1D	93	71.560	ENSOMEG00000014912	polr1d	70	74.286	Oryzias_melastigma
ENSSPUG00000005786	POLR1D	95	72.973	ENSOGAG00000014601	POLR1D	79	76.190	Otolemur_garnettii
ENSSPUG00000005786	POLR1D	95	72.973	ENSOARG00000017005	POLR1D	81	76.190	Ovis_aries
ENSSPUG00000005786	POLR1D	91	74.528	ENSPPAG00000028138	POLR1D	75	78.000	Pan_paniscus
ENSSPUG00000005786	POLR1D	95	72.973	ENSPPRG00000003381	POLR1D	79	76.190	Panthera_pardus
ENSSPUG00000005786	POLR1D	95	72.973	ENSPTIG00000018137	POLR1D	79	76.190	Panthera_tigris_altaica
ENSSPUG00000005786	POLR1D	95	72.072	ENSPTRG00000005734	POLR1D	79	75.238	Pan_troglodytes
ENSSPUG00000005786	POLR1D	95	72.973	ENSPANG00000020259	-	79	76.190	Papio_anubis
ENSSPUG00000005786	POLR1D	95	61.261	ENSPANG00000035051	-	78	63.810	Papio_anubis
ENSSPUG00000005786	POLR1D	84	70.408	ENSPKIG00000021891	polr1d	90	53.509	Paramormyrops_kingsleyae
ENSSPUG00000005786	POLR1D	96	78.571	ENSPSIG00000011822	POLR1D	81	80.952	Pelodiscus_sinensis
ENSSPUG00000005786	POLR1D	88	60.194	ENSPMGG00000012998	POLR1D	70	62.887	Periophthalmus_magnuspinnatus
ENSSPUG00000005786	POLR1D	88	68.932	ENSPMGG00000010359	polr1d	84	72.165	Periophthalmus_magnuspinnatus
ENSSPUG00000005786	POLR1D	95	72.072	ENSPEMG00000006336	-	81	75.238	Peromyscus_maniculatus_bairdii
ENSSPUG00000005786	POLR1D	87	64.706	ENSPMAG00000004228	polr1d	82	66.327	Petromyzon_marinus
ENSSPUG00000005786	POLR1D	96	75.893	ENSPCIG00000001673	POLR1D	92	79.048	Phascolarctos_cinereus
ENSSPUG00000005786	POLR1D	95	70.270	ENSPFOG00000023343	polr1d	100	71.264	Poecilia_formosa
ENSSPUG00000005786	POLR1D	95	70.270	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSSPUG00000005786	POLR1D	95	70.270	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSSPUG00000005786	POLR1D	95	70.270	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSSPUG00000005786	POLR1D	95	71.171	ENSPCOG00000028175	POLR1D	79	74.286	Propithecus_coquereli
ENSSPUG00000005786	POLR1D	95	72.973	ENSPNYG00000000107	polr1d	92	76.190	Pundamilia_nyererei
ENSSPUG00000005786	POLR1D	89	69.231	ENSPNAG00000001512	polr1d	87	69.231	Pygocentrus_nattereri
ENSSPUG00000005786	POLR1D	95	69.369	ENSRBIG00000000336	-	79	72.381	Rhinopithecus_bieti
ENSSPUG00000005786	POLR1D	95	72.973	ENSRBIG00000036378	-	79	76.190	Rhinopithecus_bieti
ENSSPUG00000005786	POLR1D	95	70.270	ENSRROG00000026751	-	79	73.333	Rhinopithecus_roxellana
ENSSPUG00000005786	POLR1D	95	72.973	ENSRROG00000042232	-	79	76.190	Rhinopithecus_roxellana
ENSSPUG00000005786	POLR1D	83	49.485	YNL113W	RPC19	64	53.846	Saccharomyces_cerevisiae
ENSSPUG00000005786	POLR1D	95	72.072	ENSSBOG00000028482	-	79	75.238	Saimiri_boliviensis_boliviensis
ENSSPUG00000005786	POLR1D	81	71.579	ENSSBOG00000030146	-	65	76.136	Saimiri_boliviensis_boliviensis
ENSSPUG00000005786	POLR1D	94	75.455	ENSSHAG00000001190	POLR1D	80	78.641	Sarcophilus_harrisii
ENSSPUG00000005786	POLR1D	95	72.072	ENSSFOG00015011375	polr1d	91	75.238	Scleropages_formosus
ENSSPUG00000005786	POLR1D	95	70.270	ENSSMAG00000011861	polr1d	92	73.333	Scophthalmus_maximus
ENSSPUG00000005786	POLR1D	95	70.270	ENSSDUG00000011930	polr1d	92	73.333	Seriola_dumerili
ENSSPUG00000005786	POLR1D	87	71.569	ENSSLDG00000023871	polr1d	81	75.000	Seriola_lalandi_dorsalis
ENSSPUG00000005786	POLR1D	91	75.472	ENSSARG00000007840	POLR1D	75	79.000	Sorex_araneus
ENSSPUG00000005786	POLR1D	95	72.072	ENSSPAG00000011764	polr1d	92	75.238	Stegastes_partitus
ENSSPUG00000005786	POLR1D	88	75.728	ENSSSCG00000009310	POLR1D	73	79.381	Sus_scrofa
ENSSPUG00000005786	POLR1D	82	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSSPUG00000005786	POLR1D	96	67.857	ENSTRUG00000019741	polr1d	92	70.476	Takifugu_rubripes
ENSSPUG00000005786	POLR1D	95	72.072	ENSTBEG00000007006	POLR1D	85	75.238	Tupaia_belangeri
ENSSPUG00000005786	POLR1D	95	72.973	ENSUAMG00000011413	POLR1D	79	76.190	Ursus_americanus
ENSSPUG00000005786	POLR1D	95	72.973	ENSUMAG00000016968	POLR1D	82	76.190	Ursus_maritimus
ENSSPUG00000005786	POLR1D	95	72.973	ENSVVUG00000009216	POLR1D	79	76.190	Vulpes_vulpes
ENSSPUG00000005786	POLR1D	83	74.227	ENSXCOG00000011731	polr1d	70	78.022	Xiphophorus_couchianus
ENSSPUG00000005786	POLR1D	83	74.227	ENSXMAG00000017538	polr1d	70	78.022	Xiphophorus_maculatus