EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000005889 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 8998 bases
Position: chrQEPC01004665.1:55326-64323
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000007618	RRM_5	PF13893.6	9.4e-07	1	1
ENSSPUP00000007618	RRM_1	PF00076.22	2e-35	1	2
ENSSPUP00000007618	RRM_1	PF00076.22	2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000008113	-	1125	-	ENSSPUP00000007618	151 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000005889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000005889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000005889	-	50	34.667	ENSSPUG00000004967	SRSF6	56	34.667
ENSSPUG00000005889	-	52	34.615	ENSSPUG00000019124	-	88	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000005889	-	90	72.263	ENSANAG00000033951	-	100	72.263	Aotus_nancymaae
ENSSPUG00000005889	-	93	72.340	ENSTSYG00000035012	-	94	72.340	Carlito_syrichta
ENSSPUG00000005889	-	93	90.780	ENSTSYG00000036089	-	89	90.780	Carlito_syrichta
ENSSPUG00000005889	-	95	67.832	ENSCCAG00000021719	-	100	67.832	Cebus_capucinus
ENSSPUG00000005889	-	90	70.588	ENSCCAG00000024345	-	100	70.588	Cebus_capucinus
ENSSPUG00000005889	-	93	74.468	ENSCCAG00000029710	-	99	75.182	Cebus_capucinus
ENSSPUG00000005889	-	93	74.468	ENSCANG00000043380	-	82	74.468	Colobus_angolensis_palliatus
ENSSPUG00000005889	-	99	68.667	ENSGGOG00000025398	-	99	71.631	Gorilla_gorilla
ENSSPUG00000005889	-	95	86.014	ENSHGLG00000007708	-	98	86.014	Heterocephalus_glaber_female
ENSSPUG00000005889	-	93	75.000	ENSHGLG00000003890	-	96	75.000	Heterocephalus_glaber_female
ENSSPUG00000005889	-	94	84.507	ENSHGLG00100012753	-	90	84.507	Heterocephalus_glaber_male
ENSSPUG00000005889	-	95	86.014	ENSHGLG00100011999	-	98	86.014	Heterocephalus_glaber_male
ENSSPUG00000005889	-	94	79.167	ENSHGLG00100011767	-	80	79.167	Heterocephalus_glaber_male
ENSSPUG00000005889	-	97	73.826	ENSJJAG00000014755	-	91	79.137	Jaculus_jaculus
ENSSPUG00000005889	-	95	90.210	ENSJJAG00000011978	-	88	90.210	Jaculus_jaculus
ENSSPUG00000005889	-	93	75.177	ENSMFAG00000041731	-	60	75.177	Macaca_fascicularis
ENSSPUG00000005889	-	96	89.655	ENSMMUG00000010577	-	99	89.655	Macaca_mulatta
ENSSPUG00000005889	-	93	75.177	ENSMNEG00000036946	-	60	75.177	Macaca_nemestrina
ENSSPUG00000005889	-	93	75.177	ENSMLEG00000038589	-	60	75.177	Mandrillus_leucophaeus
ENSSPUG00000005889	-	91	92.754	ENSNGAG00000012575	-	99	92.754	Nannospalax_galili
ENSSPUG00000005889	-	99	73.333	ENSPANG00000018676	-	96	73.333	Papio_anubis
ENSSPUG00000005889	-	93	75.177	ENSRBIG00000035855	-	86	75.177	Rhinopithecus_bieti
ENSSPUG00000005889	-	97	72.789	ENSRROG00000038956	-	87	74.468	Rhinopithecus_roxellana
ENSSPUG00000005889	-	95	69.444	ENSSBOG00000025871	-	100	69.444	Saimiri_boliviensis_boliviensis
ENSSPUG00000005889	-	93	92.857	ENSUMAG00000011745	-	63	92.857	Ursus_maritimus