EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000006253 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 172666 bases
Position: chrQEPC01003301.1:552531-725196
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000008069	CPSF_A	PF03178.15	6.1e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000008602	SF3B3-201	4573	-	ENSSPUP00000008069	1217 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000006253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000006253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000006253	SF3B3	100	98.932	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSSPUG00000006253	SF3B3	96	93.254	ENSAPOG00000006172	sf3b3	98	93.254	Acanthochromis_polyacanthus
ENSSPUG00000006253	SF3B3	100	98.770	ENSAMEG00000002187	SF3B3	100	98.770	Ailuropoda_melanoleuca
ENSSPUG00000006253	SF3B3	92	90.357	ENSACIG00000016487	sf3b3	100	90.357	Amphilophus_citrinellus
ENSSPUG00000006253	SF3B3	100	93.180	ENSAOCG00000007158	sf3b3	100	93.180	Amphiprion_ocellaris
ENSSPUG00000006253	SF3B3	100	93.180	ENSAPEG00000022786	sf3b3	100	93.180	Amphiprion_percula
ENSSPUG00000006253	SF3B3	100	93.344	ENSATEG00000013708	sf3b3	100	93.344	Anabas_testudineus
ENSSPUG00000006253	SF3B3	81	97.670	ENSAPLG00000004996	SF3B3	100	97.670	Anas_platyrhynchos
ENSSPUG00000006253	SF3B3	100	99.014	ENSACAG00000001817	SF3B3	100	99.014	Anolis_carolinensis
ENSSPUG00000006253	SF3B3	100	98.932	ENSANAG00000028001	SF3B3	100	98.932	Aotus_nancymaae
ENSSPUG00000006253	SF3B3	96	92.997	ENSACLG00000022555	sf3b3	98	92.997	Astatotilapia_calliptera
ENSSPUG00000006253	SF3B3	100	93.098	ENSAMXG00000003410	sf3b3	100	93.098	Astyanax_mexicanus
ENSSPUG00000006253	SF3B3	100	98.932	ENSBTAG00000010627	SF3B3	100	98.932	Bos_taurus
ENSSPUG00000006253	SF3B3	100	60.456	WBGene00019323	teg-4	100	60.456	Caenorhabditis_elegans
ENSSPUG00000006253	SF3B3	100	98.932	ENSCJAG00000014773	SF3B3	99	98.932	Callithrix_jacchus
ENSSPUG00000006253	SF3B3	100	99.014	ENSCAFG00000020151	SF3B3	100	99.014	Canis_familiaris
ENSSPUG00000006253	SF3B3	100	99.014	ENSCAFG00020020912	SF3B3	100	99.014	Canis_lupus_dingo
ENSSPUG00000006253	SF3B3	100	99.014	ENSCHIG00000019822	SF3B3	100	99.014	Capra_hircus
ENSSPUG00000006253	SF3B3	100	98.932	ENSTSYG00000007910	SF3B3	100	98.932	Carlito_syrichta
ENSSPUG00000006253	SF3B3	84	88.330	ENSCAPG00000001484	SF3B3	92	88.330	Cavia_aperea
ENSSPUG00000006253	SF3B3	100	97.617	ENSCPOG00000000586	SF3B3	100	97.617	Cavia_porcellus
ENSSPUG00000006253	SF3B3	100	98.932	ENSCCAG00000017736	SF3B3	100	98.932	Cebus_capucinus
ENSSPUG00000006253	SF3B3	100	98.932	ENSCATG00000036562	SF3B3	100	98.932	Cercocebus_atys
ENSSPUG00000006253	SF3B3	100	98.932	ENSCLAG00000003921	SF3B3	100	98.932	Chinchilla_lanigera
ENSSPUG00000006253	SF3B3	100	99.014	ENSCSAG00000004371	SF3B3	100	99.014	Chlorocebus_sabaeus
ENSSPUG00000006253	SF3B3	90	92.523	ENSCHOG00000001878	SF3B3	90	92.523	Choloepus_hoffmanni
ENSSPUG00000006253	SF3B3	100	98.521	ENSCPBG00000015853	SF3B3	100	98.521	Chrysemys_picta_bellii
ENSSPUG00000006253	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSSPUG00000006253	SF3B3	99	79.228	ENSCSAVG00000011454	-	100	79.228	Ciona_savignyi
ENSSPUG00000006253	SF3B3	100	95.809	ENSCANG00000042920	SF3B3	100	95.809	Colobus_angolensis_palliatus
ENSSPUG00000006253	SF3B3	100	98.850	ENSCGRG00001015908	Sf3b3	100	98.850	Cricetulus_griseus_chok1gshd
ENSSPUG00000006253	SF3B3	100	98.850	ENSCGRG00000010180	Sf3b3	100	98.850	Cricetulus_griseus_crigri
ENSSPUG00000006253	SF3B3	82	92.315	ENSCSEG00000014192	sf3b3	99	92.315	Cynoglossus_semilaevis
ENSSPUG00000006253	SF3B3	100	92.440	ENSCVAG00000010459	sf3b3	100	92.440	Cyprinodon_variegatus
ENSSPUG00000006253	SF3B3	100	93.098	ENSDARG00000103553	sf3b3	100	93.098	Danio_rerio
ENSSPUG00000006253	SF3B3	85	99.036	ENSDNOG00000043626	SF3B3	100	99.036	Dasypus_novemcinctus
ENSSPUG00000006253	SF3B3	100	98.932	ENSDORG00000014176	Sf3b3	100	98.932	Dipodomys_ordii
ENSSPUG00000006253	SF3B3	100	75.224	FBgn0035162	Sf3b3	100	75.224	Drosophila_melanogaster
ENSSPUG00000006253	SF3B3	84	99.462	ENSETEG00000002729	SF3B3	84	99.462	Echinops_telfairi
ENSSPUG00000006253	SF3B3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
ENSSPUG00000006253	SF3B3	100	99.014	ENSEASG00005013376	SF3B3	100	99.014	Equus_asinus_asinus
ENSSPUG00000006253	SF3B3	100	99.014	ENSECAG00000014053	SF3B3	100	99.014	Equus_caballus
ENSSPUG00000006253	SF3B3	93	98.929	ENSEEUG00000015611	SF3B3	93	98.929	Erinaceus_europaeus
ENSSPUG00000006253	SF3B3	100	91.311	ENSELUG00000015417	sf3b3	100	91.311	Esox_lucius
ENSSPUG00000006253	SF3B3	100	99.014	ENSFCAG00000009487	SF3B3	100	99.014	Felis_catus
ENSSPUG00000006253	SF3B3	100	98.767	ENSFALG00000007372	SF3B3	100	98.767	Ficedula_albicollis
ENSSPUG00000006253	SF3B3	100	99.014	ENSFDAG00000002608	SF3B3	100	99.014	Fukomys_damarensis
ENSSPUG00000006253	SF3B3	100	92.851	ENSFHEG00000017824	sf3b3	100	92.851	Fundulus_heteroclitus
ENSSPUG00000006253	SF3B3	100	89.409	ENSGMOG00000008139	sf3b3	100	89.409	Gadus_morhua
ENSSPUG00000006253	SF3B3	100	98.932	ENSGALG00000002531	SF3B3	100	98.932	Gallus_gallus
ENSSPUG00000006253	SF3B3	100	92.523	ENSGAFG00000015206	sf3b3	100	92.523	Gambusia_affinis
ENSSPUG00000006253	SF3B3	100	92.857	ENSGACG00000002646	sf3b3	100	92.857	Gasterosteus_aculeatus
ENSSPUG00000006253	SF3B3	96	98.548	ENSGAGG00000006746	SF3B3	97	98.548	Gopherus_agassizii
ENSSPUG00000006253	SF3B3	100	98.932	ENSGGOG00000003246	SF3B3	100	98.932	Gorilla_gorilla
ENSSPUG00000006253	SF3B3	92	85.446	ENSHBUG00000005960	sf3b3	100	86.607	Haplochromis_burtoni
ENSSPUG00000006253	SF3B3	100	98.932	ENSHGLG00000010135	SF3B3	100	98.932	Heterocephalus_glaber_female
ENSSPUG00000006253	SF3B3	100	96.756	ENSHGLG00100011148	SF3B3	100	96.756	Heterocephalus_glaber_male
ENSSPUG00000006253	SF3B3	100	92.523	ENSHCOG00000011981	sf3b3	100	92.523	Hippocampus_comes
ENSSPUG00000006253	SF3B3	100	93.016	ENSIPUG00000020435	sf3b3	100	93.016	Ictalurus_punctatus
ENSSPUG00000006253	SF3B3	100	98.932	ENSSTOG00000007065	SF3B3	100	98.932	Ictidomys_tridecemlineatus
ENSSPUG00000006253	SF3B3	100	98.932	ENSJJAG00000003948	Sf3b3	100	98.932	Jaculus_jaculus
ENSSPUG00000006253	SF3B3	100	90.633	ENSKMAG00000004066	sf3b3	99	92.827	Kryptolebias_marmoratus
ENSSPUG00000006253	SF3B3	100	92.769	ENSLBEG00000018302	sf3b3	100	92.769	Labrus_bergylta
ENSSPUG00000006253	SF3B3	98	92.193	ENSLACG00000012501	SF3B3	99	92.193	Latimeria_chalumnae
ENSSPUG00000006253	SF3B3	100	93.924	ENSLOCG00000007566	sf3b3	100	93.924	Lepisosteus_oculatus
ENSSPUG00000006253	SF3B3	100	99.014	ENSLAFG00000012219	SF3B3	100	99.014	Loxodonta_africana
ENSSPUG00000006253	SF3B3	100	98.932	ENSMFAG00000045487	SF3B3	100	98.932	Macaca_fascicularis
ENSSPUG00000006253	SF3B3	100	98.932	ENSMMUG00000017812	SF3B3	100	98.932	Macaca_mulatta
ENSSPUG00000006253	SF3B3	100	98.932	ENSMNEG00000033385	SF3B3	100	98.932	Macaca_nemestrina
ENSSPUG00000006253	SF3B3	100	95.399	ENSMLEG00000043891	SF3B3	100	95.399	Mandrillus_leucophaeus
ENSSPUG00000006253	SF3B3	100	93.344	ENSMAMG00000016837	sf3b3	100	93.344	Mastacembelus_armatus
ENSSPUG00000006253	SF3B3	100	92.933	ENSMZEG00005010836	sf3b3	100	92.933	Maylandia_zebra
ENSSPUG00000006253	SF3B3	89	90.009	ENSMZEG00005026015	sf3b3	99	90.009	Maylandia_zebra
ENSSPUG00000006253	SF3B3	100	98.932	ENSMGAG00000001597	SF3B3	100	98.932	Meleagris_gallopavo
ENSSPUG00000006253	SF3B3	81	81.481	ENSMAUG00000013618	Sf3b3	95	81.481	Mesocricetus_auratus
ENSSPUG00000006253	SF3B3	100	97.785	ENSMICG00000001363	SF3B3	100	97.785	Microcebus_murinus
ENSSPUG00000006253	SF3B3	100	98.850	ENSMOCG00000006108	Sf3b3	100	98.850	Microtus_ochrogaster
ENSSPUG00000006253	SF3B3	89	90.287	ENSMMOG00000002598	sf3b3	97	90.287	Mola_mola
ENSSPUG00000006253	SF3B3	100	94.581	ENSMODG00000014363	SF3B3	100	94.581	Monodelphis_domestica
ENSSPUG00000006253	SF3B3	100	93.016	ENSMALG00000008014	sf3b3	100	93.016	Monopterus_albus
ENSSPUG00000006253	SF3B3	100	98.850	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.850	Mus_caroli
ENSSPUG00000006253	SF3B3	100	98.850	ENSMUSG00000033732	Sf3b3	100	98.850	Mus_musculus
ENSSPUG00000006253	SF3B3	100	98.767	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.767	Mus_spretus
ENSSPUG00000006253	SF3B3	100	99.014	ENSMPUG00000010277	SF3B3	100	99.014	Mustela_putorius_furo
ENSSPUG00000006253	SF3B3	100	98.932	ENSMLUG00000014607	SF3B3	100	98.932	Myotis_lucifugus
ENSSPUG00000006253	SF3B3	100	98.932	ENSNGAG00000021903	Sf3b3	100	98.932	Nannospalax_galili
ENSSPUG00000006253	SF3B3	83	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSSPUG00000006253	SF3B3	100	97.455	ENSNLEG00000016127	SF3B3	100	97.455	Nomascus_leucogenys
ENSSPUG00000006253	SF3B3	92	97.889	ENSMEUG00000004479	SF3B3	94	97.889	Notamacropus_eugenii
ENSSPUG00000006253	SF3B3	98	95.725	ENSOPRG00000009847	SF3B3	100	95.725	Ochotona_princeps
ENSSPUG00000006253	SF3B3	100	99.014	ENSODEG00000014154	SF3B3	100	99.014	Octodon_degus
ENSSPUG00000006253	SF3B3	100	93.180	ENSONIG00000011198	sf3b3	100	93.180	Oreochromis_niloticus
ENSSPUG00000006253	SF3B3	100	98.932	ENSOANG00000001161	-	100	98.932	Ornithorhynchus_anatinus
ENSSPUG00000006253	SF3B3	100	96.631	ENSOCUG00000004139	SF3B3	100	96.631	Oryctolagus_cuniculus
ENSSPUG00000006253	SF3B3	100	93.180	ENSORLG00000013472	sf3b3	100	93.180	Oryzias_latipes
ENSSPUG00000006253	SF3B3	100	93.180	ENSORLG00020017473	sf3b3	100	93.180	Oryzias_latipes_hni
ENSSPUG00000006253	SF3B3	100	93.180	ENSORLG00015007710	sf3b3	100	93.180	Oryzias_latipes_hsok
ENSSPUG00000006253	SF3B3	100	92.851	ENSOMEG00000014483	sf3b3	100	92.851	Oryzias_melastigma
ENSSPUG00000006253	SF3B3	100	98.525	ENSOGAG00000016051	SF3B3	100	98.525	Otolemur_garnettii
ENSSPUG00000006253	SF3B3	100	98.770	ENSOARG00000004816	SF3B3	100	98.770	Ovis_aries
ENSSPUG00000006253	SF3B3	100	98.932	ENSPPAG00000026807	SF3B3	100	98.932	Pan_paniscus
ENSSPUG00000006253	SF3B3	100	99.014	ENSPPRG00000001686	SF3B3	100	99.014	Panthera_pardus
ENSSPUG00000006253	SF3B3	89	96.136	ENSPTIG00000020382	SF3B3	100	96.136	Panthera_tigris_altaica
ENSSPUG00000006253	SF3B3	100	98.932	ENSPTRG00000008308	SF3B3	100	98.932	Pan_troglodytes
ENSSPUG00000006253	SF3B3	100	98.932	ENSPANG00000024075	SF3B3	100	98.932	Papio_anubis
ENSSPUG00000006253	SF3B3	100	92.523	ENSPKIG00000002712	sf3b3	100	92.523	Paramormyrops_kingsleyae
ENSSPUG00000006253	SF3B3	89	98.712	ENSPSIG00000002232	SF3B3	100	98.712	Pelodiscus_sinensis
ENSSPUG00000006253	SF3B3	100	98.850	ENSPEMG00000008603	Sf3b3	100	98.850	Peromyscus_maniculatus_bairdii
ENSSPUG00000006253	SF3B3	100	91.372	ENSPMAG00000001793	sf3b3	100	91.372	Petromyzon_marinus
ENSSPUG00000006253	SF3B3	100	98.932	ENSPCIG00000014927	SF3B3	100	98.932	Phascolarctos_cinereus
ENSSPUG00000006253	SF3B3	100	92.523	ENSPFOG00000015516	sf3b3	100	92.523	Poecilia_formosa
ENSSPUG00000006253	SF3B3	100	92.523	ENSPLAG00000014330	sf3b3	100	92.523	Poecilia_latipinna
ENSSPUG00000006253	SF3B3	100	92.605	ENSPMEG00000019856	sf3b3	100	92.605	Poecilia_mexicana
ENSSPUG00000006253	SF3B3	82	92.749	ENSPREG00000019669	sf3b3	98	92.749	Poecilia_reticulata
ENSSPUG00000006253	SF3B3	95	98.929	ENSPPYG00000007539	SF3B3	100	98.929	Pongo_abelii
ENSSPUG00000006253	SF3B3	100	77.403	ENSPCAG00000002623	SF3B3	100	77.403	Procavia_capensis
ENSSPUG00000006253	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSSPUG00000006253	SF3B3	100	98.932	ENSPVAG00000000684	SF3B3	100	98.932	Pteropus_vampyrus
ENSSPUG00000006253	SF3B3	100	93.016	ENSPNYG00000003528	sf3b3	100	93.016	Pundamilia_nyererei
ENSSPUG00000006253	SF3B3	100	93.262	ENSPNAG00000015419	sf3b3	100	93.262	Pygocentrus_nattereri
ENSSPUG00000006253	SF3B3	100	98.850	ENSRNOG00000017724	Sf3b3	100	98.850	Rattus_norvegicus
ENSSPUG00000006253	SF3B3	100	98.932	ENSRBIG00000021904	SF3B3	100	98.932	Rhinopithecus_bieti
ENSSPUG00000006253	SF3B3	100	98.932	ENSRROG00000045703	SF3B3	100	98.932	Rhinopithecus_roxellana
ENSSPUG00000006253	SF3B3	100	98.932	ENSSBOG00000029156	SF3B3	100	98.932	Saimiri_boliviensis_boliviensis
ENSSPUG00000006253	SF3B3	100	98.932	ENSSHAG00000000372	SF3B3	100	98.932	Sarcophilus_harrisii
ENSSPUG00000006253	SF3B3	100	93.837	ENSSFOG00015012877	sf3b3	100	93.837	Scleropages_formosus
ENSSPUG00000006253	SF3B3	100	92.687	ENSSMAG00000014386	sf3b3	100	92.687	Scophthalmus_maximus
ENSSPUG00000006253	SF3B3	100	93.426	ENSSDUG00000021201	sf3b3	100	93.426	Seriola_dumerili
ENSSPUG00000006253	SF3B3	100	93.344	ENSSLDG00000017532	sf3b3	100	93.344	Seriola_lalandi_dorsalis
ENSSPUG00000006253	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSSPUG00000006253	SF3B3	100	85.620	ENSSPAG00000003125	sf3b3	100	85.620	Stegastes_partitus
ENSSPUG00000006253	SF3B3	100	99.014	ENSSSCG00000025323	SF3B3	100	99.014	Sus_scrofa
ENSSPUG00000006253	SF3B3	100	98.933	ENSTGUG00000006082	SF3B3	100	98.933	Taeniopygia_guttata
ENSSPUG00000006253	SF3B3	89	93.015	ENSTNIG00000004857	sf3b3	100	93.015	Tetraodon_nigroviridis
ENSSPUG00000006253	SF3B3	93	83.891	ENSTBEG00000002946	SF3B3	100	83.891	Tupaia_belangeri
ENSSPUG00000006253	SF3B3	100	98.192	ENSTTRG00000005855	SF3B3	100	98.192	Tursiops_truncatus
ENSSPUG00000006253	SF3B3	100	99.014	ENSUAMG00000006780	SF3B3	100	99.014	Ursus_americanus
ENSSPUG00000006253	SF3B3	100	99.014	ENSUMAG00000017757	SF3B3	100	99.014	Ursus_maritimus
ENSSPUG00000006253	SF3B3	100	82.909	ENSVPAG00000003202	SF3B3	100	82.909	Vicugna_pacos
ENSSPUG00000006253	SF3B3	100	98.932	ENSVVUG00000017922	SF3B3	100	98.932	Vulpes_vulpes
ENSSPUG00000006253	SF3B3	100	96.220	ENSXETG00000032869	SF3B3	100	96.220	Xenopus_tropicalis
ENSSPUG00000006253	SF3B3	80	91.496	ENSXCOG00000013628	sf3b3	98	91.496	Xiphophorus_couchianus
ENSSPUG00000006253	SF3B3	100	92.523	ENSXMAG00000006334	sf3b3	99	93.598	Xiphophorus_maculatus