EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000006257 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 15258 bases
Position: chrQEPC01001533.1:17575768-17591025
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000008072	zf-U11-48K	PF05253.12	7e-11	1	1
ENSSPUP00000008079	zf-U11-48K	PF05253.12	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000008614	SNRNP48-202	1349	-	ENSSPUP00000008079	325 (aa)	-	-
ENSSPUT00000008605	SNRNP48-201	1415	-	ENSSPUP00000008072	347 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000006257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000006257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000006257	SNRNP48	84	65.188	ENSG00000168566	SNRNP48	84	64.765	Homo_sapiens
ENSSPUG00000006257	SNRNP48	68	52.869	ENSAPOG00000021430	snrnp48	71	52.400	Acanthochromis_polyacanthus
ENSSPUG00000006257	SNRNP48	95	58.430	ENSAMEG00000017349	SNRNP48	98	58.430	Ailuropoda_melanoleuca
ENSSPUG00000006257	SNRNP48	68	50.420	ENSACIG00000002032	snrnp48	68	50.000	Amphilophus_citrinellus
ENSSPUG00000006257	SNRNP48	61	53.812	ENSAOCG00000010562	snrnp48	83	48.505	Amphiprion_ocellaris
ENSSPUG00000006257	SNRNP48	61	53.636	ENSAPEG00000003231	snrnp48	82	47.213	Amphiprion_percula
ENSSPUG00000006257	SNRNP48	68	52.479	ENSATEG00000020210	snrnp48	83	50.352	Anabas_testudineus
ENSSPUG00000006257	SNRNP48	97	71.131	ENSACAG00000002811	SNRNP48	99	71.131	Anolis_carolinensis
ENSSPUG00000006257	SNRNP48	84	64.164	ENSANAG00000033538	SNRNP48	84	63.758	Aotus_nancymaae
ENSSPUG00000006257	SNRNP48	88	47.604	ENSAMXG00000015309	snrnp48	97	45.536	Astyanax_mexicanus
ENSSPUG00000006257	SNRNP48	84	63.481	ENSBTAG00000001123	SNRNP48	84	62.752	Bos_taurus
ENSSPUG00000006257	SNRNP48	84	64.505	ENSCJAG00000021330	SNRNP48	84	64.094	Callithrix_jacchus
ENSSPUG00000006257	SNRNP48	85	64.765	ENSCAFG00000009574	SNRNP48	70	64.765	Canis_familiaris
ENSSPUG00000006257	SNRNP48	85	64.765	ENSCAFG00020013203	SNRNP48	84	64.765	Canis_lupus_dingo
ENSSPUG00000006257	SNRNP48	84	63.823	ENSCHIG00000015216	SNRNP48	84	63.423	Capra_hircus
ENSSPUG00000006257	SNRNP48	84	64.966	ENSTSYG00000000698	SNRNP48	98	58.430	Carlito_syrichta
ENSSPUG00000006257	SNRNP48	84	64.527	ENSCAPG00000006768	SNRNP48	92	64.527	Cavia_aperea
ENSSPUG00000006257	SNRNP48	84	64.846	ENSCPOG00000007910	SNRNP48	98	59.130	Cavia_porcellus
ENSSPUG00000006257	SNRNP48	84	64.164	ENSCCAG00000035652	SNRNP48	84	63.758	Cebus_capucinus
ENSSPUG00000006257	SNRNP48	84	64.164	ENSCATG00000033947	SNRNP48	84	63.758	Cercocebus_atys
ENSSPUG00000006257	SNRNP48	84	64.164	ENSCLAG00000003765	SNRNP48	83	64.189	Chinchilla_lanigera
ENSSPUG00000006257	SNRNP48	85	64.765	ENSCSAG00000007409	SNRNP48	84	64.765	Chlorocebus_sabaeus
ENSSPUG00000006257	SNRNP48	90	77.532	ENSCPBG00000019146	SNRNP48	96	77.532	Chrysemys_picta_bellii
ENSSPUG00000006257	SNRNP48	61	32.579	ENSCING00000004121	-	65	32.579	Ciona_intestinalis
ENSSPUG00000006257	SNRNP48	84	64.846	ENSCANG00000030017	SNRNP48	84	64.430	Colobus_angolensis_palliatus
ENSSPUG00000006257	SNRNP48	86	65.132	ENSCGRG00001001076	-	86	63.487	Cricetulus_griseus_chok1gshd
ENSSPUG00000006257	SNRNP48	85	51.852	ENSCGRG00001008805	-	75	54.924	Cricetulus_griseus_chok1gshd
ENSSPUG00000006257	SNRNP48	86	65.132	ENSCGRG00000007781	Snrnp48	86	63.487	Cricetulus_griseus_crigri
ENSSPUG00000006257	SNRNP48	63	49.776	ENSCSEG00000000722	snrnp48	75	46.182	Cynoglossus_semilaevis
ENSSPUG00000006257	SNRNP48	80	47.887	ENSCVAG00000019829	snrnp48	79	47.249	Cyprinodon_variegatus
ENSSPUG00000006257	SNRNP48	70	51.029	ENSDARG00000039989	snrnp48	74	50.000	Danio_rerio
ENSSPUG00000006257	SNRNP48	85	66.779	ENSDNOG00000014978	SNRNP48	84	66.779	Dasypus_novemcinctus
ENSSPUG00000006257	SNRNP48	95	58.213	ENSDORG00000015140	Snrnp48	98	58.213	Dipodomys_ordii
ENSSPUG00000006257	SNRNP48	85	64.094	ENSEASG00005012021	SNRNP48	84	64.094	Equus_asinus_asinus
ENSSPUG00000006257	SNRNP48	85	64.430	ENSECAG00000026937	SNRNP48	84	64.430	Equus_caballus
ENSSPUG00000006257	SNRNP48	85	46.154	ENSEEUG00000015437	SNRNP48	84	46.154	Erinaceus_europaeus
ENSSPUG00000006257	SNRNP48	77	48.339	ENSELUG00000009766	snrnp48	85	43.987	Esox_lucius
ENSSPUG00000006257	SNRNP48	84	65.646	ENSFCAG00000018853	SNRNP48	83	65.646	Felis_catus
ENSSPUG00000006257	SNRNP48	91	69.375	ENSFALG00000007797	SNRNP48	100	69.375	Ficedula_albicollis
ENSSPUG00000006257	SNRNP48	95	57.803	ENSFDAG00000009231	SNRNP48	98	57.803	Fukomys_damarensis
ENSSPUG00000006257	SNRNP48	57	55.941	ENSFHEG00000014647	snrnp48	88	51.685	Fundulus_heteroclitus
ENSSPUG00000006257	SNRNP48	57	54.187	ENSGMOG00000018599	-	94	45.973	Gadus_morhua
ENSSPUG00000006257	SNRNP48	81	72.982	ENSGALG00000013005	SNRNP48	94	72.598	Gallus_gallus
ENSSPUG00000006257	SNRNP48	60	54.930	ENSGAFG00000021639	snrnp48	75	51.301	Gambusia_affinis
ENSSPUG00000006257	SNRNP48	56	52.736	ENSGACG00000017756	-	79	49.814	Gasterosteus_aculeatus
ENSSPUG00000006257	SNRNP48	88	75.563	ENSGAGG00000000865	SNRNP48	100	75.563	Gopherus_agassizii
ENSSPUG00000006257	SNRNP48	84	65.188	ENSGGOG00000013220	SNRNP48	84	64.765	Gorilla_gorilla
ENSSPUG00000006257	SNRNP48	59	53.333	ENSHBUG00000017066	snrnp48	70	50.400	Haplochromis_burtoni
ENSSPUG00000006257	SNRNP48	95	59.130	ENSHGLG00000015241	SNRNP48	98	59.130	Heterocephalus_glaber_female
ENSSPUG00000006257	SNRNP48	95	59.130	ENSHGLG00100010027	SNRNP48	98	59.130	Heterocephalus_glaber_male
ENSSPUG00000006257	SNRNP48	57	53.465	ENSHCOG00000014066	snrnp48	85	45.779	Hippocampus_comes
ENSSPUG00000006257	SNRNP48	85	64.765	ENSSTOG00000014635	SNRNP48	98	58.739	Ictidomys_tridecemlineatus
ENSSPUG00000006257	SNRNP48	85	62.207	ENSJJAG00000011495	Snrnp48	98	57.020	Jaculus_jaculus
ENSSPUG00000006257	SNRNP48	59	53.365	ENSKMAG00000016514	snrnp48	77	47.970	Kryptolebias_marmoratus
ENSSPUG00000006257	SNRNP48	63	53.363	ENSLBEG00000026249	snrnp48	90	46.965	Labrus_bergylta
ENSSPUG00000006257	SNRNP48	86	59.076	ENSLACG00000003958	SNRNP48	80	59.636	Latimeria_chalumnae
ENSSPUG00000006257	SNRNP48	72	54.688	ENSLOCG00000004187	snrnp48	84	50.662	Lepisosteus_oculatus
ENSSPUG00000006257	SNRNP48	84	65.870	ENSLAFG00000011152	SNRNP48	84	65.436	Loxodonta_africana
ENSSPUG00000006257	SNRNP48	84	65.188	ENSMFAG00000045216	SNRNP48	84	64.765	Macaca_fascicularis
ENSSPUG00000006257	SNRNP48	84	65.188	ENSMMUG00000014785	SNRNP48	84	64.765	Macaca_mulatta
ENSSPUG00000006257	SNRNP48	84	65.188	ENSMNEG00000042269	SNRNP48	84	64.765	Macaca_nemestrina
ENSSPUG00000006257	SNRNP48	84	65.188	ENSMLEG00000034004	SNRNP48	84	64.765	Mandrillus_leucophaeus
ENSSPUG00000006257	SNRNP48	57	54.412	ENSMAMG00000018673	snrnp48	71	47.635	Mastacembelus_armatus
ENSSPUG00000006257	SNRNP48	83	72.260	ENSMGAG00000006037	SNRNP48	99	72.260	Meleagris_gallopavo
ENSSPUG00000006257	SNRNP48	85	65.101	ENSMAUG00000011944	Snrnp48	84	63.423	Mesocricetus_auratus
ENSSPUG00000006257	SNRNP48	84	66.894	ENSMICG00000012497	SNRNP48	84	66.443	Microcebus_murinus
ENSSPUG00000006257	SNRNP48	85	64.765	ENSMOCG00000015555	Snrnp48	84	63.087	Microtus_ochrogaster
ENSSPUG00000006257	SNRNP48	54	53.927	ENSMMOG00000003072	-	60	53.927	Mola_mola
ENSSPUG00000006257	SNRNP48	85	74.916	ENSMODG00000009996	SNRNP48	80	74.916	Monodelphis_domestica
ENSSPUG00000006257	SNRNP48	59	54.286	ENSMALG00000005725	snrnp48	78	48.561	Monopterus_albus
ENSSPUG00000006257	SNRNP48	85	65.436	MGP_CAROLIEiJ_G0018441	Snrnp48	84	63.758	Mus_caroli
ENSSPUG00000006257	SNRNP48	85	65.772	ENSMUSG00000021431	Snrnp48	84	64.094	Mus_musculus
ENSSPUG00000006257	SNRNP48	85	66.107	MGP_PahariEiJ_G0019509	Snrnp48	84	64.430	Mus_pahari
ENSSPUG00000006257	SNRNP48	85	65.772	MGP_SPRETEiJ_G0019321	Snrnp48	84	64.094	Mus_spretus
ENSSPUG00000006257	SNRNP48	85	64.765	ENSNGAG00000004849	Snrnp48	84	64.765	Nannospalax_galili
ENSSPUG00000006257	SNRNP48	80	47.535	ENSNBRG00000012127	snrnp48	82	46.053	Neolamprologus_brichardi
ENSSPUG00000006257	SNRNP48	84	65.188	ENSNLEG00000011667	SNRNP48	84	64.765	Nomascus_leucogenys
ENSSPUG00000006257	SNRNP48	81	60.211	ENSOPRG00000015471	SNRNP48	80	62.082	Ochotona_princeps
ENSSPUG00000006257	SNRNP48	84	45.791	ENSONIG00000001520	snrnp48	82	45.724	Oreochromis_niloticus
ENSSPUG00000006257	SNRNP48	71	66.935	ENSOCUG00000005168	SNRNP48	83	66.667	Oryctolagus_cuniculus
ENSSPUG00000006257	SNRNP48	71	51.394	ENSORLG00000015654	snrnp48	81	47.651	Oryzias_latipes
ENSSPUG00000006257	SNRNP48	71	49.200	ENSORLG00020015976	snrnp48	69	46.801	Oryzias_latipes_hni
ENSSPUG00000006257	SNRNP48	71	50.400	ENSORLG00015022379	snrnp48	69	47.651	Oryzias_latipes_hsok
ENSSPUG00000006257	SNRNP48	69	51.230	ENSOMEG00000022007	snrnp48	80	47.619	Oryzias_melastigma
ENSSPUG00000006257	SNRNP48	80	63.929	ENSOGAG00000005275	SNRNP48	78	65.926	Otolemur_garnettii
ENSSPUG00000006257	SNRNP48	85	62.963	ENSOARG00000017319	SNRNP48	99	62.963	Ovis_aries
ENSSPUG00000006257	SNRNP48	84	65.188	ENSPPAG00000032873	SNRNP48	84	64.765	Pan_paniscus
ENSSPUG00000006257	SNRNP48	85	64.765	ENSPPRG00000004283	SNRNP48	98	59.249	Panthera_pardus
ENSSPUG00000006257	SNRNP48	84	65.646	ENSPTIG00000013502	SNRNP48	98	65.646	Panthera_tigris_altaica
ENSSPUG00000006257	SNRNP48	84	65.188	ENSPTRG00000017703	SNRNP48	84	64.765	Pan_troglodytes
ENSSPUG00000006257	SNRNP48	84	65.188	ENSPANG00000000771	SNRNP48	84	64.765	Papio_anubis
ENSSPUG00000006257	SNRNP48	83	46.358	ENSPKIG00000013703	snrnp48	59	47.500	Paramormyrops_kingsleyae
ENSSPUG00000006257	SNRNP48	85	76.667	ENSPSIG00000002213	SNRNP48	94	76.667	Pelodiscus_sinensis
ENSSPUG00000006257	SNRNP48	59	54.245	ENSPMGG00000008120	snrnp48	74	53.774	Periophthalmus_magnuspinnatus
ENSSPUG00000006257	SNRNP48	85	64.765	ENSPEMG00000008872	Snrnp48	84	63.087	Peromyscus_maniculatus_bairdii
ENSSPUG00000006257	SNRNP48	60	53.991	ENSPFOG00000003578	snrnp48	75	50.558	Poecilia_formosa
ENSSPUG00000006257	SNRNP48	54	53.927	ENSPLAG00000002290	snrnp48	65	53.927	Poecilia_latipinna
ENSSPUG00000006257	SNRNP48	60	53.991	ENSPMEG00000018033	snrnp48	75	50.558	Poecilia_mexicana
ENSSPUG00000006257	SNRNP48	62	53.182	ENSPREG00000018541	snrnp48	77	50.000	Poecilia_reticulata
ENSSPUG00000006257	SNRNP48	84	64.164	ENSPPYG00000016209	SNRNP48	84	63.758	Pongo_abelii
ENSSPUG00000006257	SNRNP48	58	53.202	ENSPCAG00000011991	SNRNP48	80	52.558	Procavia_capensis
ENSSPUG00000006257	SNRNP48	84	64.626	ENSPVAG00000002854	SNRNP48	84	64.214	Pteropus_vampyrus
ENSSPUG00000006257	SNRNP48	82	45.862	ENSPNYG00000015399	snrnp48	84	47.482	Pundamilia_nyererei
ENSSPUG00000006257	SNRNP48	85	65.772	ENSRNOG00000013756	Snrnp48	84	64.094	Rattus_norvegicus
ENSSPUG00000006257	SNRNP48	77	66.171	ENSRBIG00000043856	SNRNP48	82	66.296	Rhinopithecus_bieti
ENSSPUG00000006257	SNRNP48	84	64.846	ENSRROG00000043229	SNRNP48	84	64.430	Rhinopithecus_roxellana
ENSSPUG00000006257	SNRNP48	84	64.505	ENSSBOG00000019486	SNRNP48	84	64.094	Saimiri_boliviensis_boliviensis
ENSSPUG00000006257	SNRNP48	85	74.582	ENSSHAG00000014483	SNRNP48	85	74.582	Sarcophilus_harrisii
ENSSPUG00000006257	SNRNP48	59	54.286	ENSSFOG00015006610	snrnp48	69	48.495	Scleropages_formosus
ENSSPUG00000006257	SNRNP48	71	50.198	ENSSDUG00000014953	snrnp48	78	48.387	Seriola_dumerili
ENSSPUG00000006257	SNRNP48	68	51.037	ENSSLDG00000005989	snrnp48	74	49.064	Seriola_lalandi_dorsalis
ENSSPUG00000006257	SNRNP48	65	51.899	ENSSPAG00000006454	snrnp48	77	50.000	Stegastes_partitus
ENSSPUG00000006257	SNRNP48	86	70.297	ENSTGUG00000007575	SNRNP48	100	68.224	Taeniopygia_guttata
ENSSPUG00000006257	SNRNP48	56	54.726	ENSTRUG00000007031	snrnp48	69	50.622	Takifugu_rubripes
ENSSPUG00000006257	SNRNP48	80	44.170	ENSTNIG00000012977	-	78	44.485	Tetraodon_nigroviridis
ENSSPUG00000006257	SNRNP48	62	67.890	ENSTBEG00000015620	SNRNP48	64	67.890	Tupaia_belangeri
ENSSPUG00000006257	SNRNP48	84	66.212	ENSTTRG00000016715	SNRNP48	84	65.436	Tursiops_truncatus
ENSSPUG00000006257	SNRNP48	85	63.758	ENSUAMG00000003690	SNRNP48	84	63.758	Ursus_americanus
ENSSPUG00000006257	SNRNP48	85	62.963	ENSVPAG00000003557	SNRNP48	99	62.963	Vicugna_pacos
ENSSPUG00000006257	SNRNP48	85	64.765	ENSVVUG00000004996	SNRNP48	99	58.857	Vulpes_vulpes
ENSSPUG00000006257	SNRNP48	76	59.851	ENSXETG00000020447	snrnp48	88	55.410	Xenopus_tropicalis
ENSSPUG00000006257	SNRNP48	52	55.676	ENSXCOG00000004478	snrnp48	81	44.528	Xiphophorus_couchianus
ENSSPUG00000006257	SNRNP48	60	54.930	ENSXMAG00000013595	snrnp48	75	51.119	Xiphophorus_maculatus