EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000006285 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 144177 bases
Position: chrQEPC01009365.1:1172171-1316347
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000008131	cwf21	PF08312.12	1.1e-15	1	1
ENSSPUP00000008117	cwf21	PF08312.12	1.3e-15	1	1
ENSSPUP00000008117	SRRM_C	PF15230.6	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000008675	SRRM3-202	855	-	ENSSPUP00000008131	284 (aa)	-	-
ENSSPUT00000008657	SRRM3-201	1041	-	ENSSPUP00000008117	346 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000006285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000006285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000006285	SRRM3	65	78.182	ENSG00000177679	SRRM3	85	45.161	Homo_sapiens
ENSSPUG00000006285	SRRM3	74	76.364	ENSCAFG00000013537	SRRM3	57	77.570	Canis_familiaris
ENSSPUG00000006285	SRRM3	65	76.364	ENSCAFG00020013073	SRRM3	60	77.570	Canis_lupus_dingo
ENSSPUG00000006285	SRRM3	66	80.000	ENSCATG00000043129	SRRM3	67	80.000	Cercocebus_atys
ENSSPUG00000006285	SRRM3	65	78.182	ENSCLAG00000007682	SRRM3	89	78.182	Chinchilla_lanigera
ENSSPUG00000006285	SRRM3	77	90.654	ENSFALG00000009603	SRRM3	51	90.826	Ficedula_albicollis
ENSSPUG00000006285	SRRM3	79	90.654	ENSGALG00000001932	SRRM3	51	90.654	Gallus_gallus
ENSSPUG00000006285	SRRM3	65	77.273	ENSHGLG00000015576	SRRM3	89	77.273	Heterocephalus_glaber_female
ENSSPUG00000006285	SRRM3	65	79.091	ENSSTOG00000014181	SRRM3	89	79.091	Ictidomys_tridecemlineatus
ENSSPUG00000006285	SRRM3	71	81.373	ENSLOCG00000002879	SRRM3	66	81.373	Lepisosteus_oculatus
ENSSPUG00000006285	SRRM3	76	89.720	ENSMGAG00000003690	SRRM3	57	89.720	Meleagris_gallopavo
ENSSPUG00000006285	SRRM3	65	77.273	ENSMAUG00000017613	Srrm3	89	77.273	Mesocricetus_auratus
ENSSPUG00000006285	SRRM3	58	80.374	MGP_CAROLIEiJ_G0027845	-	58	80.374	Mus_caroli
ENSSPUG00000006285	SRRM3	65	79.091	ENSMUSG00000039860	Srrm3	89	79.091	Mus_musculus
ENSSPUG00000006285	SRRM3	65	78.182	MGP_PahariEiJ_G0024425	Srrm3	89	78.182	Mus_pahari
ENSSPUG00000006285	SRRM3	65	79.091	MGP_SPRETEiJ_G0028844	Srrm3	89	79.091	Mus_spretus
ENSSPUG00000006285	SRRM3	66	69.091	ENSPPRG00000006254	SRRM3	64	69.091	Panthera_pardus
ENSSPUG00000006285	SRRM3	66	78.947	ENSPANG00000000776	SRRM3	58	64.706	Papio_anubis