EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000006741 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 22785 bases
Position: chrQEPC01007291.1:771444-794228
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000008678	HVSL	PF09749.9	4.7e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000009256	USB1-201	645	-	ENSSPUP00000008678	214 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000006741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000006741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000006741	USB1	100	68.692	ENSG00000103005	USB1	100	68.692	Homo_sapiens
ENSSPUG00000006741	USB1	100	53.271	ENSAPOG00000011942	usb1	76	53.271	Acanthochromis_polyacanthus
ENSSPUG00000006741	USB1	100	65.888	ENSAMEG00000017205	USB1	80	65.888	Ailuropoda_melanoleuca
ENSSPUG00000006741	USB1	100	53.271	ENSACIG00000012234	usb1	79	53.271	Amphilophus_citrinellus
ENSSPUG00000006741	USB1	100	53.271	ENSAOCG00000014831	usb1	76	53.271	Amphiprion_ocellaris
ENSSPUG00000006741	USB1	100	53.738	ENSAPEG00000000296	usb1	76	53.738	Amphiprion_percula
ENSSPUG00000006741	USB1	100	54.673	ENSATEG00000009348	usb1	76	54.673	Anabas_testudineus
ENSSPUG00000006741	USB1	95	75.000	ENSAPLG00000002756	USB1	96	74.074	Anas_platyrhynchos
ENSSPUG00000006741	USB1	100	67.593	ENSACAG00000015481	USB1	94	67.593	Anolis_carolinensis
ENSSPUG00000006741	USB1	100	69.626	ENSANAG00000035640	USB1	81	69.626	Aotus_nancymaae
ENSSPUG00000006741	USB1	100	52.336	ENSACLG00000020586	usb1	76	52.336	Astatotilapia_calliptera
ENSSPUG00000006741	USB1	99	55.399	ENSAMXG00000040146	usb1	71	55.399	Astyanax_mexicanus
ENSSPUG00000006741	USB1	100	67.757	ENSBTAG00000015758	USB1	81	67.757	Bos_taurus
ENSSPUG00000006741	USB1	100	69.159	ENSCJAG00000011733	USB1	81	69.159	Callithrix_jacchus
ENSSPUG00000006741	USB1	99	68.545	ENSCAFG00000008556	USB1	57	68.545	Canis_familiaris
ENSSPUG00000006741	USB1	99	68.545	ENSCAFG00020009263	USB1	80	68.545	Canis_lupus_dingo
ENSSPUG00000006741	USB1	100	66.355	ENSCHIG00000024290	USB1	81	66.355	Capra_hircus
ENSSPUG00000006741	USB1	100	67.757	ENSTSYG00000006997	USB1	81	67.757	Carlito_syrichta
ENSSPUG00000006741	USB1	100	54.673	ENSCAPG00000009057	USB1	91	54.673	Cavia_aperea
ENSSPUG00000006741	USB1	100	66.822	ENSCPOG00000014325	USB1	80	66.822	Cavia_porcellus
ENSSPUG00000006741	USB1	100	68.224	ENSCCAG00000022132	USB1	81	68.224	Cebus_capucinus
ENSSPUG00000006741	USB1	100	69.159	ENSCATG00000032174	USB1	81	69.159	Cercocebus_atys
ENSSPUG00000006741	USB1	82	63.636	ENSCLAG00000007363	USB1	100	63.636	Chinchilla_lanigera
ENSSPUG00000006741	USB1	100	69.626	ENSCSAG00000004783	USB1	81	69.626	Chlorocebus_sabaeus
ENSSPUG00000006741	USB1	100	76.636	ENSCPBG00000026943	USB1	77	76.636	Chrysemys_picta_bellii
ENSSPUG00000006741	USB1	95	35.047	ENSCING00000011490	-	79	32.870	Ciona_intestinalis
ENSSPUG00000006741	USB1	100	69.626	ENSCANG00000037135	USB1	81	69.626	Colobus_angolensis_palliatus
ENSSPUG00000006741	USB1	100	69.626	ENSCGRG00001011243	USB1	80	69.626	Cricetulus_griseus_chok1gshd
ENSSPUG00000006741	USB1	100	69.626	ENSCGRG00000013252	USB1	80	69.626	Cricetulus_griseus_crigri
ENSSPUG00000006741	USB1	100	54.206	ENSCSEG00000013881	usb1	77	54.206	Cynoglossus_semilaevis
ENSSPUG00000006741	USB1	96	53.398	ENSCVAG00000009252	usb1	90	52.607	Cyprinodon_variegatus
ENSSPUG00000006741	USB1	100	53.738	ENSDARG00000003841	usb1	78	53.738	Danio_rerio
ENSSPUG00000006741	USB1	100	68.224	ENSDORG00000001888	Usb1	81	68.224	Dipodomys_ordii
ENSSPUG00000006741	USB1	97	39.234	FBgn0037713	CG16790	79	39.234	Drosophila_melanogaster
ENSSPUG00000006741	USB1	100	53.738	ENSETEG00000019682	USB1	80	53.738	Echinops_telfairi
ENSSPUG00000006741	USB1	99	46.009	ENSEBUG00000005889	usb1	74	46.009	Eptatretus_burgeri
ENSSPUG00000006741	USB1	100	66.822	ENSEASG00005005484	USB1	81	66.822	Equus_asinus_asinus
ENSSPUG00000006741	USB1	100	67.290	ENSECAG00000019493	USB1	74	67.290	Equus_caballus
ENSSPUG00000006741	USB1	82	57.955	ENSEEUG00000000154	USB1	66	57.955	Erinaceus_europaeus
ENSSPUG00000006741	USB1	100	51.628	ENSELUG00000010974	usb1	79	51.628	Esox_lucius
ENSSPUG00000006741	USB1	100	66.355	ENSFCAG00000002693	USB1	80	66.355	Felis_catus
ENSSPUG00000006741	USB1	99	72.986	ENSFALG00000006876	USB1	79	72.986	Ficedula_albicollis
ENSSPUG00000006741	USB1	100	64.953	ENSFDAG00000010052	USB1	80	64.953	Fukomys_damarensis
ENSSPUG00000006741	USB1	79	57.647	ENSFHEG00000012334	usb1	73	56.284	Fundulus_heteroclitus
ENSSPUG00000006741	USB1	98	52.857	ENSGMOG00000004228	usb1	94	52.857	Gadus_morhua
ENSSPUG00000006741	USB1	100	71.163	ENSGALG00000035604	USB1	84	71.163	Gallus_gallus
ENSSPUG00000006741	USB1	99	55.924	ENSGAFG00000021890	usb1	76	55.924	Gambusia_affinis
ENSSPUG00000006741	USB1	100	50.935	ENSGACG00000003257	usb1	77	50.935	Gasterosteus_aculeatus
ENSSPUG00000006741	USB1	100	76.636	ENSGAGG00000022572	USB1	78	76.636	Gopherus_agassizii
ENSSPUG00000006741	USB1	100	68.224	ENSGGOG00000017147	USB1	81	68.224	Gorilla_gorilla
ENSSPUG00000006741	USB1	100	52.336	ENSHBUG00000009823	usb1	76	52.336	Haplochromis_burtoni
ENSSPUG00000006741	USB1	100	65.421	ENSHGLG00000016078	USB1	78	65.421	Heterocephalus_glaber_female
ENSSPUG00000006741	USB1	100	65.421	ENSHGLG00100005562	USB1	78	65.421	Heterocephalus_glaber_male
ENSSPUG00000006741	USB1	99	51.174	ENSHCOG00000015633	usb1	82	51.174	Hippocampus_comes
ENSSPUG00000006741	USB1	100	55.607	ENSIPUG00000008601	usb1	74	55.607	Ictalurus_punctatus
ENSSPUG00000006741	USB1	100	67.757	ENSSTOG00000007548	USB1	78	67.757	Ictidomys_tridecemlineatus
ENSSPUG00000006741	USB1	97	69.231	ENSJJAG00000021859	Usb1	78	69.231	Jaculus_jaculus
ENSSPUG00000006741	USB1	100	52.804	ENSKMAG00000007200	usb1	75	52.804	Kryptolebias_marmoratus
ENSSPUG00000006741	USB1	91	49.231	ENSLBEG00000008452	usb1	61	51.111	Labrus_bergylta
ENSSPUG00000006741	USB1	94	61.765	ENSLACG00000000105	USB1	73	61.137	Latimeria_chalumnae
ENSSPUG00000006741	USB1	100	57.009	ENSLOCG00000000465	usb1	76	57.009	Lepisosteus_oculatus
ENSSPUG00000006741	USB1	100	52.336	ENSLAFG00000002267	USB1	79	52.294	Loxodonta_africana
ENSSPUG00000006741	USB1	100	69.159	ENSMFAG00000003926	USB1	81	69.159	Macaca_fascicularis
ENSSPUG00000006741	USB1	100	69.159	ENSMMUG00000022669	USB1	81	69.159	Macaca_mulatta
ENSSPUG00000006741	USB1	100	68.692	ENSMNEG00000042487	USB1	81	68.692	Macaca_nemestrina
ENSSPUG00000006741	USB1	100	69.159	ENSMLEG00000028756	USB1	81	69.159	Mandrillus_leucophaeus
ENSSPUG00000006741	USB1	100	52.804	ENSMAMG00000015092	usb1	77	52.804	Mastacembelus_armatus
ENSSPUG00000006741	USB1	100	52.336	ENSMZEG00005010008	usb1	76	52.336	Maylandia_zebra
ENSSPUG00000006741	USB1	100	67.757	ENSMAUG00000007832	Usb1	80	67.757	Mesocricetus_auratus
ENSSPUG00000006741	USB1	100	68.224	ENSMICG00000004900	USB1	81	68.224	Microcebus_murinus
ENSSPUG00000006741	USB1	100	66.822	ENSMOCG00000022647	Usb1	80	66.822	Microtus_ochrogaster
ENSSPUG00000006741	USB1	100	54.673	ENSMMOG00000000490	usb1	83	54.673	Mola_mola
ENSSPUG00000006741	USB1	100	69.626	ENSMODG00000014067	USB1	80	69.626	Monodelphis_domestica
ENSSPUG00000006741	USB1	100	54.673	ENSMALG00000005930	usb1	76	54.673	Monopterus_albus
ENSSPUG00000006741	USB1	100	66.355	MGP_CAROLIEiJ_G0031421	Usb1	100	64.602	Mus_caroli
ENSSPUG00000006741	USB1	100	65.888	ENSMUSG00000031792	Usb1	100	63.717	Mus_musculus
ENSSPUG00000006741	USB1	100	65.421	MGP_PahariEiJ_G0023019	Usb1	100	64.957	Mus_pahari
ENSSPUG00000006741	USB1	100	65.888	MGP_SPRETEiJ_G0032540	Usb1	80	65.888	Mus_spretus
ENSSPUG00000006741	USB1	100	65.888	ENSMPUG00000004684	USB1	76	65.888	Mustela_putorius_furo
ENSSPUG00000006741	USB1	100	67.757	ENSMLUG00000007400	USB1	93	67.757	Myotis_lucifugus
ENSSPUG00000006741	USB1	100	68.224	ENSNGAG00000009703	Usb1	80	68.224	Nannospalax_galili
ENSSPUG00000006741	USB1	100	52.804	ENSNBRG00000008747	usb1	99	52.804	Neolamprologus_brichardi
ENSSPUG00000006741	USB1	93	68.844	ENSNLEG00000003340	USB1	80	68.844	Nomascus_leucogenys
ENSSPUG00000006741	USB1	70	62.931	ENSOPRG00000011803	USB1	64	62.931	Ochotona_princeps
ENSSPUG00000006741	USB1	100	64.953	ENSODEG00000016214	USB1	80	64.953	Octodon_degus
ENSSPUG00000006741	USB1	100	52.804	ENSONIG00000011063	usb1	77	52.804	Oreochromis_niloticus
ENSSPUG00000006741	USB1	100	70.233	ENSOANG00000012118	USB1	90	70.233	Ornithorhynchus_anatinus
ENSSPUG00000006741	USB1	100	52.804	ENSORLG00000012479	usb1	78	52.804	Oryzias_latipes
ENSSPUG00000006741	USB1	100	52.804	ENSORLG00020018671	usb1	79	52.804	Oryzias_latipes_hni
ENSSPUG00000006741	USB1	100	52.804	ENSORLG00015009679	usb1	79	52.804	Oryzias_latipes_hsok
ENSSPUG00000006741	USB1	100	51.869	ENSOMEG00000012930	usb1	77	51.869	Oryzias_melastigma
ENSSPUG00000006741	USB1	100	62.150	ENSOGAG00000003273	USB1	79	62.150	Otolemur_garnettii
ENSSPUG00000006741	USB1	100	66.822	ENSOARG00000001107	USB1	82	66.822	Ovis_aries
ENSSPUG00000006741	USB1	100	68.224	ENSPPAG00000042137	USB1	81	68.224	Pan_paniscus
ENSSPUG00000006741	USB1	100	65.888	ENSPPRG00000024797	USB1	80	65.888	Panthera_pardus
ENSSPUG00000006741	USB1	100	65.421	ENSPTIG00000007506	USB1	80	65.421	Panthera_tigris_altaica
ENSSPUG00000006741	USB1	100	68.692	ENSPTRG00000008172	USB1	100	68.692	Pan_troglodytes
ENSSPUG00000006741	USB1	100	69.159	ENSPANG00000025138	USB1	81	69.159	Papio_anubis
ENSSPUG00000006741	USB1	97	54.808	ENSPKIG00000015109	usb1	71	54.808	Paramormyrops_kingsleyae
ENSSPUG00000006741	USB1	100	55.507	ENSPSIG00000004305	USB1	95	58.411	Pelodiscus_sinensis
ENSSPUG00000006741	USB1	99	50.235	ENSPMGG00000017725	usb1	82	50.235	Periophthalmus_magnuspinnatus
ENSSPUG00000006741	USB1	100	66.355	ENSPEMG00000016183	Usb1	79	66.355	Peromyscus_maniculatus_bairdii
ENSSPUG00000006741	USB1	100	51.852	ENSPMAG00000000462	usb1	91	51.852	Petromyzon_marinus
ENSSPUG00000006741	USB1	100	55.349	ENSPFOG00000011130	usb1	77	55.349	Poecilia_formosa
ENSSPUG00000006741	USB1	100	54.884	ENSPLAG00000009820	usb1	77	54.884	Poecilia_latipinna
ENSSPUG00000006741	USB1	100	55.349	ENSPMEG00000006402	usb1	77	55.349	Poecilia_mexicana
ENSSPUG00000006741	USB1	79	59.412	ENSPREG00000001047	usb1	74	57.923	Poecilia_reticulata
ENSSPUG00000006741	USB1	93	64.179	ENSPPYG00000007401	USB1	80	64.179	Pongo_abelii
ENSSPUG00000006741	USB1	100	68.224	ENSPCOG00000022612	USB1	81	68.224	Propithecus_coquereli
ENSSPUG00000006741	USB1	100	64.019	ENSPVAG00000004613	USB1	83	64.019	Pteropus_vampyrus
ENSSPUG00000006741	USB1	100	52.336	ENSPNYG00000022262	usb1	76	52.336	Pundamilia_nyererei
ENSSPUG00000006741	USB1	100	54.673	ENSPNAG00000011736	usb1	73	54.673	Pygocentrus_nattereri
ENSSPUG00000006741	USB1	100	65.888	ENSRNOG00000013216	Usb1	80	65.888	Rattus_norvegicus
ENSSPUG00000006741	USB1	100	69.626	ENSRBIG00000044466	USB1	100	69.626	Rhinopithecus_bieti
ENSSPUG00000006741	USB1	100	69.626	ENSRROG00000029211	USB1	81	69.626	Rhinopithecus_roxellana
ENSSPUG00000006741	USB1	100	69.159	ENSSBOG00000029362	USB1	81	69.159	Saimiri_boliviensis_boliviensis
ENSSPUG00000006741	USB1	100	64.953	ENSSHAG00000006993	USB1	85	64.953	Sarcophilus_harrisii
ENSSPUG00000006741	USB1	99	56.808	ENSSFOG00015023663	usb1	67	56.808	Scleropages_formosus
ENSSPUG00000006741	USB1	100	52.632	ENSSMAG00000015834	usb1	77	52.632	Scophthalmus_maximus
ENSSPUG00000006741	USB1	100	55.607	ENSSDUG00000002949	usb1	79	55.607	Seriola_dumerili
ENSSPUG00000006741	USB1	100	55.607	ENSSLDG00000014174	usb1	76	55.607	Seriola_lalandi_dorsalis
ENSSPUG00000006741	USB1	100	52.804	ENSSPAG00000007484	usb1	75	52.804	Stegastes_partitus
ENSSPUG00000006741	USB1	100	69.159	ENSSSCG00000002807	USB1	80	69.159	Sus_scrofa
ENSSPUG00000006741	USB1	99	72.512	ENSTGUG00000004792	USB1	83	72.512	Taeniopygia_guttata
ENSSPUG00000006741	USB1	100	50.935	ENSTRUG00000021069	usb1	79	50.935	Takifugu_rubripes
ENSSPUG00000006741	USB1	100	48.131	ENSTNIG00000000626	usb1	79	48.131	Tetraodon_nigroviridis
ENSSPUG00000006741	USB1	100	45.794	ENSTBEG00000001507	USB1	92	45.794	Tupaia_belangeri
ENSSPUG00000006741	USB1	100	65.888	ENSUAMG00000016823	USB1	80	65.888	Ursus_americanus
ENSSPUG00000006741	USB1	100	65.888	ENSUMAG00000021369	USB1	100	65.888	Ursus_maritimus
ENSSPUG00000006741	USB1	53	65.789	ENSVPAG00000009834	-	57	65.789	Vicugna_pacos
ENSSPUG00000006741	USB1	99	68.545	ENSVVUG00000023700	USB1	82	68.545	Vulpes_vulpes
ENSSPUG00000006741	USB1	99	60.748	ENSXETG00000013795	usb1	86	60.748	Xenopus_tropicalis
ENSSPUG00000006741	USB1	100	55.349	ENSXMAG00000024687	usb1	63	55.349	Xiphophorus_maculatus