EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000007042 (Gene tree)
Gene ID: -
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 21225 bases
Position: chrQEPC01008384.1:2951028-2972252
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009011	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009014	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009028	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009053	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009062	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009074	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009089	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009106	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009120	AARP2CN	PF08142.12	6.2e-23	1	1
ENSSPUP00000009133	AARP2CN	PF08142.12	6.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000009702	TSR1-207	3318	-	ENSSPUP00000009089	813 (aa)	-	-
ENSSPUT00000009638	TSR1-203	3318	-	ENSSPUP00000009028	813 (aa)	-	-
ENSSPUT00000009624	TSR1-202	3318	-	ENSSPUP00000009014	813 (aa)	-	-
ENSSPUT00000009719	TSR1-208	3318	-	ENSSPUP00000009106	813 (aa)	-	-
ENSSPUT00000009620	TSR1-201	3318	-	ENSSPUP00000009011	813 (aa)	-	-
ENSSPUT00000009686	TSR1-206	3318	-	ENSSPUP00000009074	813 (aa)	-	-
ENSSPUT00000009734	TSR1-209	3318	-	ENSSPUP00000009120	813 (aa)	-	-
ENSSPUT00000009664	TSR1-204	3318	-	ENSSPUP00000009053	813 (aa)	-	-
ENSSPUT00000009674	TSR1-205	3318	-	ENSSPUP00000009062	813 (aa)	-	-
ENSSPUT00000009749	TSR1-210	3318	-	ENSSPUP00000009133	813 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007042	TSR1	98	68.781	ENSG00000167721	TSR1	99	68.828	Homo_sapiens
ENSSPUG00000007042	TSR1	99	58.184	ENSAPOG00000020891	tsr1	99	57.279	Acanthochromis_polyacanthus
ENSSPUG00000007042	TSR1	99	66.545	ENSAMEG00000007599	TSR1	99	66.463	Ailuropoda_melanoleuca
ENSSPUG00000007042	TSR1	99	57.195	ENSACIG00000007090	tsr1	100	57.024	Amphilophus_citrinellus
ENSSPUG00000007042	TSR1	99	57.882	ENSAOCG00000023284	tsr1	99	57.914	Amphiprion_ocellaris
ENSSPUG00000007042	TSR1	93	58.568	ENSAPEG00000008452	tsr1	99	58.599	Amphiprion_percula
ENSSPUG00000007042	TSR1	99	57.126	ENSATEG00000021961	tsr1	99	57.006	Anabas_testudineus
ENSSPUG00000007042	TSR1	92	74.263	ENSAPLG00000013422	TSR1	100	74.967	Anas_platyrhynchos
ENSSPUG00000007042	TSR1	73	64.000	ENSACAG00000000859	TSR1	94	64.214	Anolis_carolinensis
ENSSPUG00000007042	TSR1	98	67.955	ENSANAG00000031071	TSR1	99	68.204	Aotus_nancymaae
ENSSPUG00000007042	TSR1	99	57.882	ENSACLG00000007595	tsr1	99	57.857	Astatotilapia_calliptera
ENSSPUG00000007042	TSR1	50	55.263	ENSAMXG00000008470	tsr1	87	53.333	Astyanax_mexicanus
ENSSPUG00000007042	TSR1	99	68.758	ENSBTAG00000004225	TSR1	99	69.127	Bos_taurus
ENSSPUG00000007042	TSR1	98	38.977	WBGene00006497	tag-151	98	37.815	Caenorhabditis_elegans
ENSSPUG00000007042	TSR1	98	67.875	ENSCJAG00000012456	TSR1	98	68.125	Callithrix_jacchus
ENSSPUG00000007042	TSR1	99	66.461	ENSCAFG00000002106	-	99	66.091	Canis_familiaris
ENSSPUG00000007042	TSR1	90	64.898	ENSCAFG00000019273	-	100	68.168	Canis_familiaris
ENSSPUG00000007042	TSR1	99	66.175	ENSCAFG00020009728	TSR1	99	65.806	Canis_lupus_dingo
ENSSPUG00000007042	TSR1	99	68.635	ENSCHIG00000023935	TSR1	99	69.004	Capra_hircus
ENSSPUG00000007042	TSR1	99	66.913	ENSTSYG00000005468	TSR1	99	66.790	Carlito_syrichta
ENSSPUG00000007042	TSR1	92	67.241	ENSCPOG00000014833	TSR1	99	67.109	Cavia_porcellus
ENSSPUG00000007042	TSR1	92	67.020	ENSCCAG00000028962	TSR1	98	67.285	Cebus_capucinus
ENSSPUG00000007042	TSR1	99	68.344	ENSCATG00000044262	TSR1	99	68.512	Cercocebus_atys
ENSSPUG00000007042	TSR1	99	67.528	ENSCLAG00000005567	TSR1	99	67.282	Chinchilla_lanigera
ENSSPUG00000007042	TSR1	99	68.344	ENSCSAG00000013788	TSR1	99	68.512	Chlorocebus_sabaeus
ENSSPUG00000007042	TSR1	99	78.055	ENSCPBG00000020363	TSR1	97	77.901	Chrysemys_picta_bellii
ENSSPUG00000007042	TSR1	98	45.916	ENSCING00000020658	-	100	45.161	Ciona_intestinalis
ENSSPUG00000007042	TSR1	97	47.007	ENSCSAVG00000001875	-	99	46.442	Ciona_savignyi
ENSSPUG00000007042	TSR1	99	63.916	ENSCANG00000033056	TSR1	99	63.916	Colobus_angolensis_palliatus
ENSSPUG00000007042	TSR1	99	67.159	ENSCGRG00001023942	Tsr1	99	67.528	Cricetulus_griseus_chok1gshd
ENSSPUG00000007042	TSR1	99	61.993	ENSCGRG00000013015	Tsr1	99	57.020	Cricetulus_griseus_crigri
ENSSPUG00000007042	TSR1	100	56.750	ENSCSEG00000013009	tsr1	100	56.548	Cynoglossus_semilaevis
ENSSPUG00000007042	TSR1	99	57.678	ENSCVAG00000000506	tsr1	99	57.419	Cyprinodon_variegatus
ENSSPUG00000007042	TSR1	99	58.537	ENSDARG00000007744	tsr1	99	58.617	Danio_rerio
ENSSPUG00000007042	TSR1	99	67.036	ENSDNOG00000004715	TSR1	99	69.899	Dasypus_novemcinctus
ENSSPUG00000007042	TSR1	96	60.204	ENSDORG00000023234	-	99	59.311	Dipodomys_ordii
ENSSPUG00000007042	TSR1	99	67.897	ENSDORG00000016371	-	99	67.405	Dipodomys_ordii
ENSSPUG00000007042	TSR1	97	43.788	FBgn0037073	Tsr1	97	45.098	Drosophila_melanogaster
ENSSPUG00000007042	TSR1	91	75.738	ENSETEG00000017534	TSR1	88	75.738	Echinops_telfairi
ENSSPUG00000007042	TSR1	96	54.289	ENSEBUG00000013731	TSR1	98	53.905	Eptatretus_burgeri
ENSSPUG00000007042	TSR1	99	67.159	ENSEASG00005009302	TSR1	96	68.500	Equus_asinus_asinus
ENSSPUG00000007042	TSR1	99	67.405	ENSECAG00000009114	TSR1	98	68.750	Equus_caballus
ENSSPUG00000007042	TSR1	99	57.470	ENSELUG00000020984	tsr1	95	57.194	Esox_lucius
ENSSPUG00000007042	TSR1	99	67.117	ENSFCAG00000006313	TSR1	99	66.790	Felis_catus
ENSSPUG00000007042	TSR1	100	75.799	ENSFALG00000006532	TSR1	99	75.799	Ficedula_albicollis
ENSSPUG00000007042	TSR1	99	67.036	ENSFDAG00000006038	TSR1	99	67.282	Fukomys_damarensis
ENSSPUG00000007042	TSR1	99	55.981	ENSFHEG00000003626	tsr1	99	56.754	Fundulus_heteroclitus
ENSSPUG00000007042	TSR1	99	55.990	ENSGMOG00000010336	tsr1	99	54.976	Gadus_morhua
ENSSPUG00000007042	TSR1	99	55.144	ENSGAFG00000012993	tsr1	99	55.875	Gambusia_affinis
ENSSPUG00000007042	TSR1	99	56.068	ENSGACG00000010843	tsr1	99	56.189	Gasterosteus_aculeatus
ENSSPUG00000007042	TSR1	99	77.057	ENSGAGG00000025619	-	99	76.543	Gopherus_agassizii
ENSSPUG00000007042	TSR1	98	69.030	ENSGGOG00000001704	TSR1	99	69.077	Gorilla_gorilla
ENSSPUG00000007042	TSR1	99	58.223	ENSHBUG00000017904	tsr1	99	58.471	Haplochromis_burtoni
ENSSPUG00000007042	TSR1	99	67.282	ENSHGLG00000012806	-	99	67.774	Heterocephalus_glaber_female
ENSSPUG00000007042	TSR1	94	60.340	ENSHGLG00000015688	-	99	58.965	Heterocephalus_glaber_female
ENSSPUG00000007042	TSR1	99	67.282	ENSHGLG00100015392	TSR1	99	67.774	Heterocephalus_glaber_male
ENSSPUG00000007042	TSR1	100	57.627	ENSHCOG00000001432	tsr1	100	56.988	Hippocampus_comes
ENSSPUG00000007042	TSR1	99	58.053	ENSIPUG00000004618	tsr1	99	58.654	Ictalurus_punctatus
ENSSPUG00000007042	TSR1	99	68.635	ENSSTOG00000011819	TSR1	99	68.635	Ictidomys_tridecemlineatus
ENSSPUG00000007042	TSR1	91	64.343	ENSJJAG00000019505	Tsr1	95	64.209	Jaculus_jaculus
ENSSPUG00000007042	TSR1	99	56.392	ENSKMAG00000005763	tsr1	99	57.160	Kryptolebias_marmoratus
ENSSPUG00000007042	TSR1	99	56.766	ENSLBEG00000021823	tsr1	99	56.802	Labrus_bergylta
ENSSPUG00000007042	TSR1	100	66.262	ENSLACG00000002197	TSR1	100	66.383	Latimeria_chalumnae
ENSSPUG00000007042	TSR1	90	59.259	ENSLOCG00000006491	TSR1	98	58.902	Lepisosteus_oculatus
ENSSPUG00000007042	TSR1	99	68.589	ENSMFAG00000021330	TSR1	99	68.758	Macaca_fascicularis
ENSSPUG00000007042	TSR1	99	68.466	ENSMMUG00000017519	TSR1	99	68.635	Macaca_mulatta
ENSSPUG00000007042	TSR1	99	68.466	ENSMNEG00000031382	TSR1	99	68.635	Macaca_nemestrina
ENSSPUG00000007042	TSR1	99	68.221	ENSMLEG00000036733	TSR1	99	68.389	Mandrillus_leucophaeus
ENSSPUG00000007042	TSR1	99	57.587	ENSMAMG00000017918	tsr1	99	57.945	Mastacembelus_armatus
ENSSPUG00000007042	TSR1	99	57.590	ENSMZEG00005007477	tsr1	100	57.807	Maylandia_zebra
ENSSPUG00000007042	TSR1	100	73.652	ENSMGAG00000005576	TSR1	100	74.632	Meleagris_gallopavo
ENSSPUG00000007042	TSR1	98	68.953	ENSMICG00000012943	TSR1	99	69.077	Microcebus_murinus
ENSSPUG00000007042	TSR1	99	65.971	ENSMOCG00000022764	Tsr1	99	65.725	Microtus_ochrogaster
ENSSPUG00000007042	TSR1	99	56.970	ENSMMOG00000014280	tsr1	99	58.029	Mola_mola
ENSSPUG00000007042	TSR1	99	70.221	ENSMODG00000010658	TSR1	99	69.975	Monodelphis_domestica
ENSSPUG00000007042	TSR1	99	57.933	ENSMALG00000011681	tsr1	99	57.964	Monopterus_albus
ENSSPUG00000007042	TSR1	99	67.159	MGP_CAROLIEiJ_G0016727	Tsr1	99	67.405	Mus_caroli
ENSSPUG00000007042	TSR1	99	67.282	ENSMUSG00000038335	Tsr1	99	67.405	Mus_musculus
ENSSPUG00000007042	TSR1	99	67.159	MGP_PahariEiJ_G0017864	Tsr1	99	67.528	Mus_pahari
ENSSPUG00000007042	TSR1	99	67.651	MGP_SPRETEiJ_G0017570	Tsr1	99	67.528	Mus_spretus
ENSSPUG00000007042	TSR1	82	69.565	ENSMPUG00000013000	TSR1	100	68.919	Mustela_putorius_furo
ENSSPUG00000007042	TSR1	98	68.703	ENSMLUG00000003505	TSR1	99	68.703	Myotis_lucifugus
ENSSPUG00000007042	TSR1	99	58.293	ENSNBRG00000020728	tsr1	99	57.926	Neolamprologus_brichardi
ENSSPUG00000007042	TSR1	98	63.046	ENSNLEG00000017184	TSR1	98	74.526	Nomascus_leucogenys
ENSSPUG00000007042	TSR1	99	66.093	ENSMEUG00000015828	TSR1	99	66.216	Notamacropus_eugenii
ENSSPUG00000007042	TSR1	99	58.029	ENSONIG00000013131	tsr1	100	57.401	Oreochromis_niloticus
ENSSPUG00000007042	TSR1	99	67.282	ENSOCUG00000014256	TSR1	99	67.897	Oryctolagus_cuniculus
ENSSPUG00000007042	TSR1	99	56.257	ENSORLG00000004926	tsr1	99	56.888	Oryzias_latipes
ENSSPUG00000007042	TSR1	99	56.325	ENSORLG00020008792	tsr1	99	56.770	Oryzias_latipes_hni
ENSSPUG00000007042	TSR1	99	56.138	ENSORLG00015013838	tsr1	99	56.770	Oryzias_latipes_hsok
ENSSPUG00000007042	TSR1	99	56.940	ENSOMEG00000004830	tsr1	99	57.245	Oryzias_melastigma
ENSSPUG00000007042	TSR1	99	66.951	ENSOGAG00000004492	TSR1	99	67.244	Otolemur_garnettii
ENSSPUG00000007042	TSR1	99	68.758	ENSOARG00000015437	TSR1	97	69.127	Ovis_aries
ENSSPUG00000007042	TSR1	98	68.905	ENSPPAG00000036355	TSR1	99	68.953	Pan_paniscus
ENSSPUG00000007042	TSR1	99	66.626	ENSPPRG00000015519	-	99	66.298	Panthera_pardus
ENSSPUG00000007042	TSR1	99	66.748	ENSPTIG00000010608	TSR1	99	66.421	Panthera_tigris_altaica
ENSSPUG00000007042	TSR1	98	68.905	ENSPTRG00000008547	TSR1	99	68.953	Pan_troglodytes
ENSSPUG00000007042	TSR1	99	65.644	ENSPANG00000024463	TSR1	99	66.421	Papio_anubis
ENSSPUG00000007042	TSR1	99	57.805	ENSPKIG00000013972	tsr1	99	58.415	Paramormyrops_kingsleyae
ENSSPUG00000007042	TSR1	87	77.183	ENSPSIG00000018258	TSR1	99	76.901	Pelodiscus_sinensis
ENSSPUG00000007042	TSR1	99	59.337	ENSPMGG00000011577	tsr1	99	59.828	Periophthalmus_magnuspinnatus
ENSSPUG00000007042	TSR1	99	67.036	ENSPEMG00000018033	Tsr1	99	67.528	Peromyscus_maniculatus_bairdii
ENSSPUG00000007042	TSR1	99	69.988	ENSPCIG00000009357	TSR1	97	70.111	Phascolarctos_cinereus
ENSSPUG00000007042	TSR1	99	56.053	ENSPFOG00000004483	TSR1	99	56.917	Poecilia_formosa
ENSSPUG00000007042	TSR1	99	55.742	ENSPLAG00000022320	tsr1	99	56.355	Poecilia_latipinna
ENSSPUG00000007042	TSR1	99	56.100	ENSPMEG00000004577	tsr1	99	56.595	Poecilia_mexicana
ENSSPUG00000007042	TSR1	99	55.317	ENSPREG00000010354	tsr1	97	55.689	Poecilia_reticulata
ENSSPUG00000007042	TSR1	98	62.438	ENSPPYG00000007792	TSR1	98	62.594	Pongo_abelii
ENSSPUG00000007042	TSR1	52	68.182	ENSPCAG00000012973	-	70	68.182	Procavia_capensis
ENSSPUG00000007042	TSR1	98	68.657	ENSPCOG00000017928	TSR1	99	68.454	Propithecus_coquereli
ENSSPUG00000007042	TSR1	99	67.036	ENSPVAG00000002162	TSR1	99	67.651	Pteropus_vampyrus
ENSSPUG00000007042	TSR1	99	58.002	ENSPNYG00000016163	tsr1	99	57.976	Pundamilia_nyererei
ENSSPUG00000007042	TSR1	99	57.775	ENSPNAG00000008659	tsr1	99	57.895	Pygocentrus_nattereri
ENSSPUG00000007042	TSR1	99	67.159	ENSRNOG00000002980	Tsr1	99	67.651	Rattus_norvegicus
ENSSPUG00000007042	TSR1	99	68.589	ENSRBIG00000040016	TSR1	99	68.266	Rhinopithecus_bieti
ENSSPUG00000007042	TSR1	99	68.589	ENSRROG00000030361	TSR1	99	68.266	Rhinopithecus_roxellana
ENSSPUG00000007042	TSR1	96	31.656	YDL060W	-	99	30.741	Saccharomyces_cerevisiae
ENSSPUG00000007042	TSR1	98	68.454	ENSSBOG00000020785	TSR1	99	68.703	Saimiri_boliviensis_boliviensis
ENSSPUG00000007042	TSR1	99	69.325	ENSSHAG00000011394	TSR1	99	69.202	Sarcophilus_harrisii
ENSSPUG00000007042	TSR1	99	58.507	ENSSFOG00015005455	tsr1	99	57.734	Scleropages_formosus
ENSSPUG00000007042	TSR1	99	56.851	ENSSMAG00000009504	tsr1	99	57.365	Scophthalmus_maximus
ENSSPUG00000007042	TSR1	100	56.593	ENSSDUG00000012074	tsr1	99	57.920	Seriola_dumerili
ENSSPUG00000007042	TSR1	100	56.959	ENSSLDG00000002031	tsr1	99	57.969	Seriola_lalandi_dorsalis
ENSSPUG00000007042	TSR1	99	58.374	ENSSARG00000000759	TSR1	99	58.005	Sorex_araneus
ENSSPUG00000007042	TSR1	99	57.246	ENSSPAG00000021951	tsr1	99	58.343	Stegastes_partitus
ENSSPUG00000007042	TSR1	99	68.143	ENSSSCG00000038534	TSR1	99	68.512	Sus_scrofa
ENSSPUG00000007042	TSR1	90	76.535	ENSTGUG00000005883	TSR1	100	76.398	Taeniopygia_guttata
ENSSPUG00000007042	TSR1	99	57.678	ENSTRUG00000004665	tsr1	99	57.888	Takifugu_rubripes
ENSSPUG00000007042	TSR1	99	57.125	ENSTNIG00000016196	tsr1	99	57.212	Tetraodon_nigroviridis
ENSSPUG00000007042	TSR1	67	80.000	ENSTBEG00000015275	-	67	80.000	Tupaia_belangeri
ENSSPUG00000007042	TSR1	99	68.143	ENSTTRG00000001177	TSR1	99	68.020	Tursiops_truncatus
ENSSPUG00000007042	TSR1	99	66.830	ENSUAMG00000025160	TSR1	99	66.462	Ursus_americanus
ENSSPUG00000007042	TSR1	96	66.837	ENSUMAG00000009294	TSR1	98	66.325	Ursus_maritimus
ENSSPUG00000007042	TSR1	83	63.289	ENSVPAG00000000228	TSR1	99	62.702	Vicugna_pacos
ENSSPUG00000007042	TSR1	99	66.215	ENSVVUG00000021767	TSR1	99	65.845	Vulpes_vulpes
ENSSPUG00000007042	TSR1	99	59.337	ENSXETG00000023797	tsr1	100	59.735	Xenopus_tropicalis
ENSSPUG00000007042	TSR1	99	56.760	ENSXCOG00000009635	tsr1	99	57.125	Xiphophorus_couchianus
ENSSPUG00000007042	TSR1	99	55.635	ENSXMAG00000001397	tsr1	96	56.318	Xiphophorus_maculatus