EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007064 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 184213 bases
Position: chrQEPC01006406.1:139680-323892
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	1	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	2	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	3	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	4	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	5	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	6	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	7	8
ENSSPUP00000009069	zf-C2H2	PF00096.26	3.2e-59	8	8
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	1	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	2	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	3	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	4	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	5	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	6	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	7	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	8	9
ENSSPUP00000009065	zf-C2H2	PF00096.26	2.1e-58	9	9
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	1	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	2	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	3	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	4	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	5	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	6	7
ENSSPUP00000009076	zf-C2H2	PF00096.26	9.9e-53	7	7
ENSSPUP00000009065	zf-met	PF12874.7	4.6e-13	1	2
ENSSPUP00000009065	zf-met	PF12874.7	4.6e-13	2	2
ENSSPUP00000009069	zf-met	PF12874.7	7.7e-12	1	2
ENSSPUP00000009069	zf-met	PF12874.7	7.7e-12	2	2
ENSSPUP00000009076	zf-met	PF12874.7	2.5e-11	1	2
ENSSPUP00000009076	zf-met	PF12874.7	2.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000009681	-	813	-	ENSSPUP00000009069	270 (aa)	-	-
ENSSPUT00000009688	-	708	-	ENSSPUP00000009076	235 (aa)	-	-
ENSSPUT00000009677	-	909	-	ENSSPUP00000009065	302 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007064	-	99	53.480	ENSSPUG00000007147	-	91	52.896
ENSSPUG00000007064	-	99	51.713	ENSSPUG00000010016	-	92	55.263
ENSSPUG00000007064	-	94	41.772	ENSSPUG00000018057	SNAI1	60	41.772
ENSSPUG00000007064	-	99	47.436	ENSSPUG00000000709	ZNF236	59	47.436
ENSSPUG00000007064	-	97	38.043	ENSSPUG00000008417	ZNF770	76	38.043
ENSSPUG00000007064	-	96	45.378	ENSSPUG00000009941	PRDM5	83	41.256
ENSSPUG00000007064	-	96	60.000	ENSSPUG00000009898	-	96	50.958
ENSSPUG00000007064	-	99	42.708	ENSSPUG00000011420	E4F1	57	42.708
ENSSPUG00000007064	-	98	47.273	ENSSPUG00000011853	ZBTB48	54	47.273
ENSSPUG00000007064	-	93	39.241	ENSSPUG00000001720	OVOL2	58	40.909
ENSSPUG00000007064	-	96	51.341	ENSSPUG00000000229	-	88	51.542
ENSSPUG00000007064	-	98	33.476	ENSSPUG00000015298	PATZ1	50	33.476
ENSSPUG00000007064	-	99	54.639	ENSSPUG00000009764	-	62	55.172
ENSSPUG00000007064	-	96	59.412	ENSSPUG00000004366	-	58	59.412
ENSSPUG00000007064	-	94	38.095	ENSSPUG00000005307	GTF3A	70	35.000
ENSSPUG00000007064	-	99	56.000	ENSSPUG00000010059	-	87	57.965
ENSSPUG00000007064	-	96	38.938	ENSSPUG00000005427	-	59	38.938
ENSSPUG00000007064	-	99	31.126	ENSSPUG00000010618	MAZ	65	33.166
ENSSPUG00000007064	-	98	53.982	ENSSPUG00000000136	-	99	53.982
ENSSPUG00000007064	-	97	56.195	ENSSPUG00000018867	-	96	56.195
ENSSPUG00000007064	-	99	44.737	ENSSPUG00000007609	ZBTB49	53	47.368
ENSSPUG00000007064	-	98	46.053	ENSSPUG00000018637	SCRT2	51	46.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007064	-	99	52.041	ENSACIG00000017647	-	90	50.673	Amphilophus_citrinellus
ENSSPUG00000007064	-	97	59.322	ENSAOCG00000003277	-	81	59.322	Amphiprion_ocellaris
ENSSPUG00000007064	-	99	40.803	ENSAPEG00000016601	-	82	43.038	Amphiprion_percula
ENSSPUG00000007064	-	98	50.829	ENSACLG00000005615	-	54	51.244	Astatotilapia_calliptera
ENSSPUG00000007064	-	99	46.914	ENSACLG00000015989	-	92	43.825	Astatotilapia_calliptera
ENSSPUG00000007064	-	97	44.550	ENSCSAVG00000002179	-	99	45.894	Ciona_savignyi
ENSSPUG00000007064	-	97	52.047	ENSCGRG00001004047	-	73	50.000	Cricetulus_griseus_chok1gshd
ENSSPUG00000007064	-	97	50.000	ENSCSEG00000001771	-	59	47.577	Cynoglossus_semilaevis
ENSSPUG00000007064	-	98	46.316	ENSEBUG00000002589	-	76	46.316	Eptatretus_burgeri
ENSSPUG00000007064	-	99	45.627	ENSEBUG00000002537	-	88	45.045	Eptatretus_burgeri
ENSSPUG00000007064	-	99	45.378	ENSEBUG00000011244	-	85	46.957	Eptatretus_burgeri
ENSSPUG00000007064	-	98	50.829	ENSHBUG00000020071	-	54	51.244	Haplochromis_burtoni
ENSSPUG00000007064	-	98	51.562	ENSHBUG00000012758	-	90	50.806	Haplochromis_burtoni
ENSSPUG00000007064	-	99	46.914	ENSHBUG00000016546	-	64	46.914	Haplochromis_burtoni
ENSSPUG00000007064	-	99	46.154	ENSMZEG00005020731	-	87	44.541	Maylandia_zebra
ENSSPUG00000007064	-	99	46.914	ENSMZEG00005027844	-	64	46.914	Maylandia_zebra
ENSSPUG00000007064	-	98	52.308	MGP_CAROLIEiJ_G0029612	Zfp141	55	52.308	Mus_caroli
ENSSPUG00000007064	-	98	52.692	ENSMUSG00000092416	Zfp141	60	50.671	Mus_musculus
ENSSPUG00000007064	-	98	56.627	MGP_SPRETEiJ_G0030709	-	83	52.734	Mus_spretus
ENSSPUG00000007064	-	98	50.829	ENSNBRG00000023229	-	80	52.128	Neolamprologus_brichardi
ENSSPUG00000007064	-	98	44.498	ENSONIG00000006238	-	100	45.894	Oreochromis_niloticus
ENSSPUG00000007064	-	99	44.531	ENSONIG00000018188	-	100	45.045	Oreochromis_niloticus
ENSSPUG00000007064	-	97	48.438	ENSONIG00000014100	-	91	46.914	Oreochromis_niloticus
ENSSPUG00000007064	-	99	48.739	ENSPFOG00000007708	-	99	48.739	Poecilia_formosa
ENSSPUG00000007064	-	97	50.505	ENSPLAG00000010448	-	55	46.186	Poecilia_latipinna
ENSSPUG00000007064	-	99	48.120	ENSPCAG00000001613	-	75	48.120	Procavia_capensis
ENSSPUG00000007064	-	99	49.309	ENSPNYG00000005671	-	78	49.309	Pundamilia_nyererei
ENSSPUG00000007064	-	96	63.636	ENSPNAG00000015131	-	91	63.636	Pygocentrus_nattereri
ENSSPUG00000007064	-	99	50.885	ENSSFOG00015000652	ZNF775	88	51.282	Scleropages_formosus
ENSSPUG00000007064	-	98	45.106	ENSSDUG00000004089	-	94	42.929	Seriola_dumerili
ENSSPUG00000007064	-	99	52.113	ENSSDUG00000005401	-	95	50.296	Seriola_dumerili
ENSSPUG00000007064	-	99	47.030	ENSSDUG00000020595	-	86	45.614	Seriola_dumerili
ENSSPUG00000007064	-	99	45.882	ENSSPAG00000009587	-	99	44.397	Stegastes_partitus
ENSSPUG00000007064	-	98	54.688	ENSTTRG00000004891	-	70	54.688	Tursiops_truncatus
ENSSPUG00000007064	-	98	42.177	ENSXETG00000015125	-	97	41.438	Xenopus_tropicalis
ENSSPUG00000007064	-	98	50.237	ENSXETG00000030967	-	94	52.071	Xenopus_tropicalis