EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007147 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 1221 bases
Position: chrQEPC01002796.1:180752-181972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	1	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	2	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	3	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	4	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	5	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	6	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	7	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	8	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	9	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	10	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	11	12
ENSSPUP00000009179	zf-C2H2	PF00096.26	2.7e-65	12	12
ENSSPUP00000009179	zf-met	PF12874.7	1e-11	1	2
ENSSPUP00000009179	zf-met	PF12874.7	1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000009798	-	1221	-	ENSSPUP00000009179	406 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007147	-	92	34.188	ENSSPUG00000008417	ZNF770	96	34.188
ENSSPUG00000007147	-	92	36.154	ENSSPUG00000010618	MAZ	58	36.719
ENSSPUG00000007147	-	93	58.854	ENSSPUG00000004366	-	63	56.432
ENSSPUG00000007147	-	91	40.217	ENSSPUG00000015298	PATZ1	53	40.217
ENSSPUG00000007147	-	92	51.961	ENSSPUG00000016039	GFI1B	55	51.961
ENSSPUG00000007147	-	95	36.567	ENSSPUG00000018057	SNAI1	61	36.567
ENSSPUG00000007147	-	95	58.088	ENSSPUG00000009898	-	97	58.088
ENSSPUG00000007147	-	96	56.831	ENSSPUG00000009764	-	64	58.710
ENSSPUG00000007147	-	84	41.333	ENSSPUG00000015952	-	53	40.132
ENSSPUG00000007147	-	92	57.576	ENSSPUG00000010016	-	95	57.576
ENSSPUG00000007147	-	95	39.080	ENSSPUG00000001720	OVOL2	69	39.080
ENSSPUG00000007147	-	92	48.485	ENSSPUG00000007609	ZBTB49	50	48.485
ENSSPUG00000007147	-	91	52.896	ENSSPUG00000007064	-	99	53.480
ENSSPUG00000007147	-	90	61.696	ENSSPUG00000018867	-	88	61.696
ENSSPUG00000007147	-	94	36.697	ENSSPUG00000000709	ZNF236	69	36.697
ENSSPUG00000007147	-	93	37.778	ENSSPUG00000005427	-	56	37.778
ENSSPUG00000007147	-	89	39.865	ENSSPUG00000011853	ZBTB48	59	39.865
ENSSPUG00000007147	-	91	45.890	ENSSPUG00000009941	PRDM5	83	40.244
ENSSPUG00000007147	-	88	33.955	ENSSPUG00000005307	GTF3A	70	36.453
ENSSPUG00000007147	-	90	57.836	ENSSPUG00000000229	-	88	60.215
ENSSPUG00000007147	-	88	44.000	ENSSPUG00000018637	SCRT2	51	44.000
ENSSPUG00000007147	-	95	39.744	ENSSPUG00000011420	E4F1	54	37.121
ENSSPUG00000007147	-	93	59.580	ENSSPUG00000010059	-	84	59.580
ENSSPUG00000007147	-	93	56.869	ENSSPUG00000000136	-	98	56.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007147	-	91	54.266	ENSAMXG00000044028	-	95	54.266	Astyanax_mexicanus
ENSSPUG00000007147	-	93	55.488	ENSAMXG00000000353	-	97	55.488	Astyanax_mexicanus
ENSSPUG00000007147	-	91	48.031	ENSAMXG00000034096	-	87	48.031	Astyanax_mexicanus
ENSSPUG00000007147	-	90	51.869	ENSAMXG00000043019	-	92	51.869	Astyanax_mexicanus
ENSSPUG00000007147	-	92	52.963	ENSAMXG00000029783	-	88	53.036	Astyanax_mexicanus
ENSSPUG00000007147	-	90	55.000	ENSBTAG00000040358	-	100	55.000	Bos_taurus
ENSSPUG00000007147	-	94	49.488	ENSBTAG00000014593	-	79	49.488	Bos_taurus
ENSSPUG00000007147	-	94	55.220	ENSCSAG00000000471	-	99	55.220	Chlorocebus_sabaeus
ENSSPUG00000007147	-	91	50.158	ENSCPBG00000009609	-	93	48.333	Chrysemys_picta_bellii
ENSSPUG00000007147	-	98	57.705	ENSCPBG00000002430	-	77	57.843	Chrysemys_picta_bellii
ENSSPUG00000007147	-	91	50.704	ENSDNOG00000042588	-	81	50.704	Dasypus_novemcinctus
ENSSPUG00000007147	-	86	46.154	ENSDNOG00000047529	-	69	46.154	Dasypus_novemcinctus
ENSSPUG00000007147	-	91	49.558	ENSEBUG00000013221	-	89	49.558	Eptatretus_burgeri
ENSSPUG00000007147	-	94	46.176	ENSEBUG00000016164	-	70	46.176	Eptatretus_burgeri
ENSSPUG00000007147	-	95	43.223	ENSEBUG00000016969	-	77	43.223	Eptatretus_burgeri
ENSSPUG00000007147	-	96	45.232	ENSELUG00000019008	-	87	45.232	Esox_lucius
ENSSPUG00000007147	-	93	53.147	ENSFCAG00000043966	-	99	53.147	Felis_catus
ENSSPUG00000007147	-	84	44.186	ENSGAFG00000013048	-	75	44.186	Gambusia_affinis
ENSSPUG00000007147	-	97	49.231	ENSGAFG00000021131	-	89	48.148	Gambusia_affinis
ENSSPUG00000007147	-	94	55.495	ENSGGOG00000042802	-	99	55.495	Gorilla_gorilla
ENSSPUG00000007147	-	97	47.273	ENSHCOG00000014713	-	98	46.281	Hippocampus_comes
ENSSPUG00000007147	-	98	46.944	ENSHCOG00000019512	-	94	46.944	Hippocampus_comes
ENSSPUG00000007147	-	94	55.495	ENSMFAG00000008648	-	99	55.495	Macaca_fascicularis
ENSSPUG00000007147	-	94	55.495	ENSMNEG00000001556	-	99	55.495	Macaca_nemestrina
ENSSPUG00000007147	-	94	55.220	ENSMLEG00000007035	-	99	55.220	Mandrillus_leucophaeus
ENSSPUG00000007147	-	98	47.074	ENSMAUG00000015263	-	69	47.074	Mesocricetus_auratus
ENSSPUG00000007147	-	90	46.448	ENSMOCG00000003394	-	68	45.902	Microtus_ochrogaster
ENSSPUG00000007147	-	98	50.000	ENSMODG00000028916	-	60	50.000	Monodelphis_domestica
ENSSPUG00000007147	-	90	50.420	ENSMPUG00000006562	-	56	50.420	Mustela_putorius_furo
ENSSPUG00000007147	-	75	50.265	ENSNBRG00000010194	-	66	48.744	Neolamprologus_brichardi
ENSSPUG00000007147	-	94	55.220	ENSNLEG00000018988	-	99	55.220	Nomascus_leucogenys
ENSSPUG00000007147	-	92	52.778	ENSMEUG00000012153	-	65	52.663	Notamacropus_eugenii
ENSSPUG00000007147	-	94	52.547	ENSMEUG00000006978	-	89	52.547	Notamacropus_eugenii
ENSSPUG00000007147	-	95	48.214	ENSOGAG00000024538	-	59	48.214	Otolemur_garnettii
ENSSPUG00000007147	-	94	55.495	ENSPPAG00000014496	-	99	55.495	Pan_paniscus
ENSSPUG00000007147	-	94	55.495	ENSPANG00000030207	-	99	55.495	Papio_anubis
ENSSPUG00000007147	-	91	55.124	ENSPSIG00000009650	-	70	55.124	Pelodiscus_sinensis
ENSSPUG00000007147	-	93	56.140	ENSPSIG00000010405	-	99	56.494	Pelodiscus_sinensis
ENSSPUG00000007147	-	94	46.175	ENSPEMG00000010242	-	70	46.175	Peromyscus_maniculatus_bairdii
ENSSPUG00000007147	-	78	42.561	ENSPLAG00000020710	-	72	42.561	Poecilia_latipinna
ENSSPUG00000007147	-	98	47.305	ENSPLAG00000021062	-	94	46.133	Poecilia_latipinna
ENSSPUG00000007147	-	91	48.901	ENSPLAG00000010389	-	66	48.901	Poecilia_latipinna
ENSSPUG00000007147	-	97	47.475	ENSPCAG00000009106	-	79	47.475	Procavia_capensis
ENSSPUG00000007147	-	93	40.148	ENSPNYG00000024243	-	94	41.885	Pundamilia_nyererei
ENSSPUG00000007147	-	96	53.226	ENSPNAG00000018644	-	99	53.226	Pygocentrus_nattereri
ENSSPUG00000007147	-	98	48.241	ENSSHAG00000001415	-	83	48.241	Sarcophilus_harrisii
ENSSPUG00000007147	-	91	50.000	ENSSDUG00000009534	-	66	50.000	Seriola_dumerili
ENSSPUG00000007147	-	98	47.385	ENSSLDG00000013760	-	99	49.138	Seriola_lalandi_dorsalis
ENSSPUG00000007147	-	99	46.906	ENSTRUG00000006896	-	87	46.906	Takifugu_rubripes
ENSSPUG00000007147	-	99	49.608	ENSVPAG00000011867	-	90	49.608	Vicugna_pacos
ENSSPUG00000007147	-	98	43.333	ENSXCOG00000009794	-	86	43.333	Xiphophorus_couchianus