EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSPUG00000007223 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Minus strand
Length
47329 bases
Position
chrQEPC01008384.1:3373810-3421138
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000009316tRNA_anti-codonPF01336.251.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000009941RPA1-2011761-ENSSPUP00000009316586 (aa)--
Gene Model
Click here to download ENSSPUG00000007223's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007223's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000007223RPA19862.075ENSAPOG00000011658rpa19961.111Acanthochromis_polyacanthus
ENSSPUG00000007223RPA19855.200ENSAPOG00000019409RPA19255.200Acanthochromis_polyacanthus
ENSSPUG00000007223RPA19972.819ENSAMEG00000007706RPA19672.819Ailuropoda_melanoleuca
ENSSPUG00000007223RPA19755.424ENSACIG00000012881RPA19955.424Amphilophus_citrinellus
ENSSPUG00000007223RPA19855.993ENSACIG00000007277rpa19955.993Amphilophus_citrinellus
ENSSPUG00000007223RPA19863.095ENSAOCG00000023376rpa110062.326Amphiprion_ocellaris
ENSSPUG00000007223RPA19852.441ENSAOCG00000009003RPA19752.208Amphiprion_ocellaris
ENSSPUG00000007223RPA19863.095ENSAPEG00000008634rpa19962.326Amphiprion_percula
ENSSPUG00000007223RPA19856.627ENSAPEG00000019132RPA19556.627Amphiprion_percula
ENSSPUG00000007223RPA19853.006ENSATEG00000006443RPA19753.006Anabas_testudineus
ENSSPUG00000007223RPA19762.371ENSATEG00000022024rpa110062.371Anabas_testudineus
ENSSPUG00000007223RPA19966.276ENSAPLG00000012442RPA19966.276Anas_platyrhynchos
ENSSPUG00000007223RPA19966.667ENSACAG00000014490RPA19866.998Anolis_carolinensis
ENSSPUG00000007223RPA19972.987ENSANAG00000023456RPA19972.987Aotus_nancymaae
ENSSPUG00000007223RPA19562.632ENSACLG00000006640rpa19962.632Astatotilapia_calliptera
ENSSPUG00000007223RPA19855.556ENSACLG00000005223RPA19755.556Astatotilapia_calliptera
ENSSPUG00000007223RPA19860.781ENSAMXG00000008418rpa19959.348Astyanax_mexicanus
ENSSPUG00000007223RPA19972.819ENSBTAG00000009711RPA19772.819Bos_taurus
ENSSPUG00000007223RPA19972.315ENSCJAG00000001848RPA19772.483Callithrix_jacchus
ENSSPUG00000007223RPA19973.782ENSCAFG00000019249RPA19773.782Canis_familiaris
ENSSPUG00000007223RPA19973.782ENSCAFG00020009847RPA19773.782Canis_lupus_dingo
ENSSPUG00000007223RPA19972.819ENSCHIG00000026308RPA19772.819Capra_hircus
ENSSPUG00000007223RPA19972.483ENSTSYG00000003482-9772.483Carlito_syrichta
ENSSPUG00000007223RPA19972.315ENSCPOG00000000035RPA19772.315Cavia_porcellus
ENSSPUG00000007223RPA19959.197ENSCCAG00000010981RPA19659.365Cebus_capucinus
ENSSPUG00000007223RPA19968.792ENSCLAG00000015045-9768.792Chinchilla_lanigera
ENSSPUG00000007223RPA19972.651ENSCLAG00000005185-9772.651Chinchilla_lanigera
ENSSPUG00000007223RPA19959.265ENSCSAG00000013833RPA19659.500Chlorocebus_sabaeus
ENSSPUG00000007223RPA17377.169ENSCHOG00000009454-9977.169Choloepus_hoffmanni
ENSSPUG00000007223RPA19770.358ENSCHOG00000013540-9970.358Choloepus_hoffmanni
ENSSPUG00000007223RPA110083.748ENSCPBG00000020377RPA110084.441Chrysemys_picta_bellii
ENSSPUG00000007223RPA19941.528ENSCING00000023482-9741.528Ciona_intestinalis
ENSSPUG00000007223RPA19971.235ENSCANG00000030911RPA19871.235Colobus_angolensis_palliatus
ENSSPUG00000007223RPA19873.790ENSCGRG00001008197Rpa19773.456Cricetulus_griseus_chok1gshd
ENSSPUG00000007223RPA18373.373ENSCGRG00000000582Rpa19972.978Cricetulus_griseus_crigri
ENSSPUG00000007223RPA19951.133ENSCSEG00000012726RPA19851.877Cynoglossus_semilaevis
ENSSPUG00000007223RPA19860.304ENSCSEG00000013066rpa19760.304Cynoglossus_semilaevis
ENSSPUG00000007223RPA19962.121ENSCVAG00000019431rpa110062.324Cyprinodon_variegatus
ENSSPUG00000007223RPA19352.589ENSCVAG00000013446-9251.696Cyprinodon_variegatus
ENSSPUG00000007223RPA19860.169ENSDARG00000003938rpa19760.169Danio_rerio
ENSSPUG00000007223RPA19973.534ENSDNOG00000017218RPA19773.534Dasypus_novemcinctus
ENSSPUG00000007223RPA19972.605ENSDORG00000006199Rpa19772.605Dipodomys_ordii
ENSSPUG00000007223RPA19941.235FBgn0010173RpA-709641.903Drosophila_melanogaster
ENSSPUG00000007223RPA18171.875ENSETEG00000017608RPA17971.875Echinops_telfairi
ENSSPUG00000007223RPA19974.074ENSEASG00005009372RPA19973.217Equus_asinus_asinus
ENSSPUG00000007223RPA19973.950ENSECAG00000023886RPA19773.950Equus_caballus
ENSSPUG00000007223RPA16976.134ENSEEUG00000002186-6876.134Erinaceus_europaeus
ENSSPUG00000007223RPA19054.444ENSELUG00000006136RPA19954.444Esox_lucius
ENSSPUG00000007223RPA19863.069ENSELUG00000021071rpa19663.069Esox_lucius
ENSSPUG00000007223RPA19972.120ENSFCAG00000006306RPA19772.120Felis_catus
ENSSPUG00000007223RPA110078.182ENSFALG00000006575RPA19878.182Ficedula_albicollis
ENSSPUG00000007223RPA19972.605ENSFDAG00000007720RPA19772.605Fukomys_damarensis
ENSSPUG00000007223RPA19861.395ENSFHEG00000003580rpa19761.395Fundulus_heteroclitus
ENSSPUG00000007223RPA19959.091ENSGMOG00000010382rpa19858.992Gadus_morhua
ENSSPUG00000007223RPA110078.607ENSGALG00000003072RPA19878.607Gallus_gallus
ENSSPUG00000007223RPA19862.309ENSGAFG00000012916rpa19762.309Gambusia_affinis
ENSSPUG00000007223RPA19853.459ENSGAFG00000020953RPA19752.830Gambusia_affinis
ENSSPUG00000007223RPA19860.544ENSGACG00000010856rpa19760.544Gasterosteus_aculeatus
ENSSPUG00000007223RPA110083.914ENSGAGG00000013611RPA19883.914Gopherus_agassizii
ENSSPUG00000007223RPA19971.186ENSGGOG00000014186RPA19671.186Gorilla_gorilla
ENSSPUG00000007223RPA19863.203ENSHBUG00000017773rpa19663.203Haplochromis_burtoni
ENSSPUG00000007223RPA19852.712ENSHBUG00000009348RPA19952.712Haplochromis_burtoni
ENSSPUG00000007223RPA19972.773ENSHGLG00000008846RPA19772.773Heterocephalus_glaber_female
ENSSPUG00000007223RPA19968.456ENSHGLG00100000799-9768.456Heterocephalus_glaber_male
ENSSPUG00000007223RPA19972.773ENSHGLG00100017755-9772.773Heterocephalus_glaber_male
ENSSPUG00000007223RPA19961.849ENSHGLG00100002005-9661.953Heterocephalus_glaber_male
ENSSPUG00000007223RPA19644.597ENSHCOG00000000351RPA19444.597Hippocampus_comes
ENSSPUG00000007223RPA19858.992ENSHCOG00000001401rpa19759.160Hippocampus_comes
ENSSPUG00000007223RPA19859.729ENSIPUG00000004400rpa19659.729Ictalurus_punctatus
ENSSPUG00000007223RPA19370.877ENSSTOG00000022475RPA19570.877Ictidomys_tridecemlineatus
ENSSPUG00000007223RPA19773.424ENSJJAG00000000876Rpa19873.424Jaculus_jaculus
ENSSPUG00000007223RPA19860.606ENSKMAG00000005605rpa19761.279Kryptolebias_marmoratus
ENSSPUG00000007223RPA19853.794ENSKMAG00000000234RPA19653.794Kryptolebias_marmoratus
ENSSPUG00000007223RPA19859.494ENSLBEG00000002281RPA19059.494Labrus_bergylta
ENSSPUG00000007223RPA19961.279ENSLBEG00000021604rpa19761.279Labrus_bergylta
ENSSPUG00000007223RPA18264.729ENSLACG00000007210RPA19964.729Latimeria_chalumnae
ENSSPUG00000007223RPA19865.646ENSLOCG00000006397rpa19665.646Lepisosteus_oculatus
ENSSPUG00000007223RPA19972.517ENSLAFG00000015354RPA19772.517Loxodonta_africana
ENSSPUG00000007223RPA18273.293ENSMFAG00000036138-9873.547Macaca_fascicularis
ENSSPUG00000007223RPA19966.107ENSMMUG00000002442-9766.107Macaca_mulatta
ENSSPUG00000007223RPA19972.987ENSMMUG00000011604-9973.199Macaca_mulatta
ENSSPUG00000007223RPA19872.326ENSMNEG00000031632-9872.542Macaca_nemestrina
ENSSPUG00000007223RPA18770.576ENSMNEG00000029837-9670.576Macaca_nemestrina
ENSSPUG00000007223RPA19967.780ENSMLEG00000038768-9968.167Mandrillus_leucophaeus
ENSSPUG00000007223RPA19854.527ENSMAMG00000020097RPA19749.387Mastacembelus_armatus
ENSSPUG00000007223RPA19861.565ENSMAMG00000017993rpa19960.417Mastacembelus_armatus
ENSSPUG00000007223RPA19855.556ENSMZEG00005024731RPA19755.556Maylandia_zebra
ENSSPUG00000007223RPA19863.203ENSMZEG00005007551rpa19663.203Maylandia_zebra
ENSSPUG00000007223RPA110078.607ENSMGAG00000005315RPA19878.607Meleagris_gallopavo
ENSSPUG00000007223RPA19874.579ENSMAUG00000010474Rpa19974.747Mesocricetus_auratus
ENSSPUG00000007223RPA19972.315ENSMICG00000012867RPA19772.315Microcebus_murinus
ENSSPUG00000007223RPA19872.896ENSMOCG00000013019Rpa19772.896Microtus_ochrogaster
ENSSPUG00000007223RPA19854.992ENSMMOG00000010868RPA19654.992Mola_mola
ENSSPUG00000007223RPA19860.374ENSMMOG00000014292rpa19960.374Mola_mola
ENSSPUG00000007223RPA19976.510ENSMODG00000010549RPA19676.510Monodelphis_domestica
ENSSPUG00000007223RPA19854.326ENSMALG00000001208RPA18754.326Monopterus_albus
ENSSPUG00000007223RPA19862.881ENSMALG00000011453rpa19662.881Monopterus_albus
ENSSPUG00000007223RPA19873.199MGP_CAROLIEiJ_G0016734Rpa19773.199Mus_caroli
ENSSPUG00000007223RPA19872.471ENSMUSG00000000751Rpa19772.803Mus_musculus
ENSSPUG00000007223RPA19873.500MGP_PahariEiJ_G0017871Rpa19773.500Mus_pahari
ENSSPUG00000007223RPA19872.351MGP_SPRETEiJ_G0017577Rpa19772.682Mus_spretus
ENSSPUG00000007223RPA19973.613ENSMPUG00000013119RPA19773.613Mustela_putorius_furo
ENSSPUG00000007223RPA19972.454ENSMLUG00000006113RPA19672.454Myotis_lucifugus
ENSSPUG00000007223RPA19774.787ENSNGAG00000004522Rpa19474.787Nannospalax_galili
ENSSPUG00000007223RPA19662.261ENSNBRG00000020595rpa19962.261Neolamprologus_brichardi
ENSSPUG00000007223RPA19854.515ENSNBRG00000009672RPA19554.515Neolamprologus_brichardi
ENSSPUG00000007223RPA19971.933ENSNLEG00000017149RPA19772.437Nomascus_leucogenys
ENSSPUG00000007223RPA19965.042ENSMEUG00000006714RPA19865.042Notamacropus_eugenii
ENSSPUG00000007223RPA19772.987ENSODEG00000009038RPA19672.987Octodon_degus
ENSSPUG00000007223RPA19863.484ENSONIG00000013135rpa19663.484Oreochromis_niloticus
ENSSPUG00000007223RPA19974.874ENSOANG00000010880RPA19974.874Ornithorhynchus_anatinus
ENSSPUG00000007223RPA19971.930ENSOCUG00000001504RPA19771.930Oryctolagus_cuniculus
ENSSPUG00000007223RPA19853.228ENSORLG00000003368RPA19753.228Oryzias_latipes
ENSSPUG00000007223RPA19861.433ENSORLG00000004856rpa19661.433Oryzias_latipes
ENSSPUG00000007223RPA19851.932ENSORLG00020015284RPA19751.932Oryzias_latipes_hni
ENSSPUG00000007223RPA19861.433ENSORLG00020008980rpa19661.433Oryzias_latipes_hni
ENSSPUG00000007223RPA19861.433ENSORLG00015013982rpa19661.433Oryzias_latipes_hsok
ENSSPUG00000007223RPA17060.377ENSORLG00015005867-9760.377Oryzias_latipes_hsok
ENSSPUG00000007223RPA19853.612ENSORLG00015020383RPA19753.612Oryzias_latipes_hsok
ENSSPUG00000007223RPA19655.959ENSOMEG00000011040RPA19955.959Oryzias_melastigma
ENSSPUG00000007223RPA19860.647ENSOMEG00000004704rpa19660.647Oryzias_melastigma
ENSSPUG00000007223RPA17680.214ENSOGAG00000029379-9680.214Otolemur_garnettii
ENSSPUG00000007223RPA19972.941ENSOGAG00000005581-9772.941Otolemur_garnettii
ENSSPUG00000007223RPA19972.987ENSOARG00000014479RPA19772.987Ovis_aries
ENSSPUG00000007223RPA19872.054ENSPPAG00000039680RPA19672.559Pan_paniscus
ENSSPUG00000007223RPA19972.454ENSPPRG00000011807RPA19772.454Panthera_pardus
ENSSPUG00000007223RPA19972.454ENSPTIG00000007898RPA19772.454Panthera_tigris_altaica
ENSSPUG00000007223RPA19872.054ENSPTRG00000008539RPA19672.559Pan_troglodytes
ENSSPUG00000007223RPA19972.819ENSPANG00000024592RPA19773.032Papio_anubis
ENSSPUG00000007223RPA19361.939ENSPKIG00000008053rpa19162.366Paramormyrops_kingsleyae
ENSSPUG00000007223RPA110082.255ENSPSIG00000015617RPA110082.255Pelodiscus_sinensis
ENSSPUG00000007223RPA19761.102ENSPMGG00000011589rpa19861.274Periophthalmus_magnuspinnatus
ENSSPUG00000007223RPA19653.806ENSPMGG00000000543RPA19954.255Periophthalmus_magnuspinnatus
ENSSPUG00000007223RPA19874.242ENSPEMG00000021061Rpa19774.242Peromyscus_maniculatus_bairdii
ENSSPUG00000007223RPA19975.000ENSPCIG00000019049RPA19675.671Phascolarctos_cinereus
ENSSPUG00000007223RPA19862.373ENSPFOG00000003987rpa19762.373Poecilia_formosa
ENSSPUG00000007223RPA19862.203ENSPLAG00000004984rpa19762.203Poecilia_latipinna
ENSSPUG00000007223RPA19353.618ENSPLAG00000008844-9453.618Poecilia_latipinna
ENSSPUG00000007223RPA19352.755ENSPMEG00000003627-9353.923Poecilia_mexicana
ENSSPUG00000007223RPA19862.373ENSPMEG00000020602rpa110060.839Poecilia_mexicana
ENSSPUG00000007223RPA19256.655ENSPREG00000010174rpa19555.595Poecilia_reticulata
ENSSPUG00000007223RPA19856.164ENSPREG00000010119RPA19750.610Poecilia_reticulata
ENSSPUG00000007223RPA19972.483ENSPCOG00000001799RPA19772.483Propithecus_coquereli
ENSSPUG00000007223RPA19972.941ENSPVAG00000002149RPA19772.941Pteropus_vampyrus
ENSSPUG00000007223RPA19863.373ENSPNYG00000016316rpa19962.587Pundamilia_nyererei
ENSSPUG00000007223RPA19855.233ENSPNYG00000024165RPA19755.233Pundamilia_nyererei
ENSSPUG00000007223RPA19952.685ENSPNAG00000008599rpa19654.059Pygocentrus_nattereri
ENSSPUG00000007223RPA19879.227ENSRNOG00000003123Rpa19774.579Rattus_norvegicus
ENSSPUG00000007223RPA19972.362ENSRBIG00000036587RPA19772.362Rhinopithecus_bieti
ENSSPUG00000007223RPA19967.169ENSRROG00000043278RPA19767.169Rhinopithecus_roxellana
ENSSPUG00000007223RPA19832.779YAR007CRFA19532.779Saccharomyces_cerevisiae
ENSSPUG00000007223RPA19372.500ENSSBOG00000030233RPA19772.679Saimiri_boliviensis_boliviensis
ENSSPUG00000007223RPA19975.753ENSSHAG00000007969RPA19675.920Sarcophilus_harrisii
ENSSPUG00000007223RPA19862.649ENSSFOG00015005362rpa18962.649Scleropages_formosus
ENSSPUG00000007223RPA19849.533ENSSMAG00000019746RPA19748.841Scophthalmus_maximus
ENSSPUG00000007223RPA19862.585ENSSDUG00000011949rpa19762.585Seriola_dumerili
ENSSPUG00000007223RPA19951.271ENSSDUG00000016358RPA19851.343Seriola_dumerili
ENSSPUG00000007223RPA19862.755ENSSLDG00000011806rpa19762.755Seriola_lalandi_dorsalis
ENSSPUG00000007223RPA19950.224ENSSLDG00000020784RPA19058.384Seriola_lalandi_dorsalis
ENSSPUG00000007223RPA18866.667ENSSARG00000007506RPA18866.667Sorex_araneus
ENSSPUG00000007223RPA19862.245ENSSPAG00000009903rpa19762.245Stegastes_partitus
ENSSPUG00000007223RPA19856.923ENSSPAG00000011165RPA19656.923Stegastes_partitus
ENSSPUG00000007223RPA19973.154ENSSSCG00000017822RPA19973.154Sus_scrofa
ENSSPUG00000007223RPA110078.607ENSTGUG00000005775RPA19878.607Taeniopygia_guttata
ENSSPUG00000007223RPA19759.579ENSTRUG00000000405RPA18454.251Takifugu_rubripes
ENSSPUG00000007223RPA19862.755ENSTRUG00000003616rpa19762.755Takifugu_rubripes
ENSSPUG00000007223RPA19864.250ENSTNIG00000016199rpa19664.250Tetraodon_nigroviridis
ENSSPUG00000007223RPA17977.727ENSTBEG00000002709RPA18077.727Tupaia_belangeri
ENSSPUG00000007223RPA19972.529ENSTTRG00000001169RPA19772.529Tursiops_truncatus
ENSSPUG00000007223RPA18986.538ENSUAMG00000015676RPA19686.538Ursus_americanus
ENSSPUG00000007223RPA19973.277ENSUMAG00000009328RPA19773.277Ursus_maritimus
ENSSPUG00000007223RPA19971.285ENSVPAG00000009443RPA19871.285Vicugna_pacos
ENSSPUG00000007223RPA19973.782ENSVVUG00000021715RPA19773.782Vulpes_vulpes
ENSSPUG00000007223RPA19970.678ENSXETG00000013538rpa19671.235Xenopus_tropicalis
ENSSPUG00000007223RPA19261.273ENSXCOG00000010068rpa19461.273Xiphophorus_couchianus
ENSSPUG00000007223RPA19753.701ENSXCOG00000009899-9953.701Xiphophorus_couchianus
ENSSPUG00000007223RPA19860.781ENSXMAG00000004102rpa110060.915Xiphophorus_maculatus
ENSSPUG00000007223RPA18962.156ENSXMAG00000010333RPA18162.156Xiphophorus_maculatus

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