EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007341 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 73443 bases
Position: chrQEPC01011341.1:6996979-7070421
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009466	Ago_hook	PF10427.9	2.2e-18	1	1
ENSSPUP00000009466	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000010097	TNRC6C-201	4707	-	ENSSPUP00000009466	1568 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007341	TNRC6C	89	45.504	ENSSPUG00000010525	TNRC6A	78	45.224
ENSSPUG00000007341	TNRC6C	89	39.488	ENSSPUG00000010801	TNRC6B	80	39.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007341	TNRC6C	98	86.815	ENSG00000078687	TNRC6C	100	79.487	Homo_sapiens
ENSSPUG00000007341	TNRC6C	93	52.632	ENSAPOG00000019749	tnrc6c1	84	58.571	Acanthochromis_polyacanthus
ENSSPUG00000007341	TNRC6C	91	84.599	ENSAMEG00000013756	TNRC6C	79	84.599	Ailuropoda_melanoleuca
ENSSPUG00000007341	TNRC6C	92	52.223	ENSACIG00000008075	tnrc6c1	82	53.475	Amphilophus_citrinellus
ENSSPUG00000007341	TNRC6C	83	64.804	ENSAOCG00000023968	tnrc6c1	87	48.257	Amphiprion_ocellaris
ENSSPUG00000007341	TNRC6C	88	54.386	ENSAPEG00000009020	tnrc6c1	87	48.197	Amphiprion_percula
ENSSPUG00000007341	TNRC6C	98	92.661	ENSAPLG00000005456	TNRC6C	81	92.661	Anas_platyrhynchos
ENSSPUG00000007341	TNRC6C	98	94.444	ENSACAG00000016198	TNRC6C	79	94.444	Anolis_carolinensis
ENSSPUG00000007341	TNRC6C	99	84.564	ENSANAG00000021554	TNRC6C	82	85.034	Aotus_nancymaae
ENSSPUG00000007341	TNRC6C	99	82.687	ENSBTAG00000018658	TNRC6C	83	83.380	Bos_taurus
ENSSPUG00000007341	TNRC6C	99	84.564	ENSCJAG00000019431	TNRC6C	83	84.698	Callithrix_jacchus
ENSSPUG00000007341	TNRC6C	98	86.310	ENSCAFG00000005224	TNRC6C	80	86.310	Canis_familiaris
ENSSPUG00000007341	TNRC6C	98	86.727	ENSCAFG00020006661	TNRC6C	80	86.727	Canis_lupus_dingo
ENSSPUG00000007341	TNRC6C	99	82.582	ENSCHIG00000026004	TNRC6C	83	80.319	Capra_hircus
ENSSPUG00000007341	TNRC6C	91	87.144	ENSTSYG00000005403	TNRC6C	83	87.561	Carlito_syrichta
ENSSPUG00000007341	TNRC6C	97	79.381	ENSCAPG00000007307	TNRC6C	79	79.381	Cavia_aperea
ENSSPUG00000007341	TNRC6C	97	81.445	ENSCPOG00000000467	TNRC6C	80	82.210	Cavia_porcellus
ENSSPUG00000007341	TNRC6C	99	84.698	ENSCCAG00000030524	TNRC6C	85	84.698	Cebus_capucinus
ENSSPUG00000007341	TNRC6C	98	87.014	ENSCATG00000033135	TNRC6C	83	86.944	Cercocebus_atys
ENSSPUG00000007341	TNRC6C	97	83.252	ENSCLAG00000011139	TNRC6C	79	83.669	Chinchilla_lanigera
ENSSPUG00000007341	TNRC6C	98	86.389	ENSCSAG00000005167	TNRC6C	80	86.875	Chlorocebus_sabaeus
ENSSPUG00000007341	TNRC6C	64	84.234	ENSCHOG00000000088	TNRC6C	58	84.034	Choloepus_hoffmanni
ENSSPUG00000007341	TNRC6C	91	90.453	ENSCPBG00000027960	TNRC6C	82	90.732	Chrysemys_picta_bellii
ENSSPUG00000007341	TNRC6C	98	86.667	ENSCANG00000041771	TNRC6C	83	86.597	Colobus_angolensis_palliatus
ENSSPUG00000007341	TNRC6C	98	81.389	ENSCGRG00001022686	Tnrc6c	82	80.625	Cricetulus_griseus_chok1gshd
ENSSPUG00000007341	TNRC6C	98	81.389	ENSCGRG00000018041	Tnrc6c	82	80.625	Cricetulus_griseus_crigri
ENSSPUG00000007341	TNRC6C	93	67.308	ENSDARG00000076847	tnrc6c1	78	80.556	Danio_rerio
ENSSPUG00000007341	TNRC6C	95	85.843	ENSDNOG00000003247	TNRC6C	79	86.190	Dasypus_novemcinctus
ENSSPUG00000007341	TNRC6C	99	84.615	ENSDORG00000004558	Tnrc6c	82	79.013	Dipodomys_ordii
ENSSPUG00000007341	TNRC6C	80	75.272	ENSETEG00000005527	TNRC6C	70	75.439	Echinops_telfairi
ENSSPUG00000007341	TNRC6C	91	83.727	ENSEASG00005004799	TNRC6C	82	83.727	Equus_asinus_asinus
ENSSPUG00000007341	TNRC6C	99	86.022	ENSECAG00000012486	TNRC6C	81	85.605	Equus_caballus
ENSSPUG00000007341	TNRC6C	87	80.408	ENSEEUG00000010008	TNRC6C	76	80.408	Erinaceus_europaeus
ENSSPUG00000007341	TNRC6C	98	84.941	ENSFCAG00000028358	TNRC6C	82	82.064	Felis_catus
ENSSPUG00000007341	TNRC6C	91	90.742	ENSFALG00000000848	TNRC6C	83	90.606	Ficedula_albicollis
ENSSPUG00000007341	TNRC6C	91	82.835	ENSFDAG00000010368	TNRC6C	80	83.461	Fukomys_damarensis
ENSSPUG00000007341	TNRC6C	90	100.000	ENSFHEG00000002936	tnrc6c1	75	86.486	Fundulus_heteroclitus
ENSSPUG00000007341	TNRC6C	91	92.668	ENSGALG00000001725	TNRC6C	82	90.154	Gallus_gallus
ENSSPUG00000007341	TNRC6C	92	100.000	ENSGAFG00000019019	tnrc6c1	76	86.486	Gambusia_affinis
ENSSPUG00000007341	TNRC6C	88	71.429	ENSGACG00000012320	tnrc6c1	76	72.340	Gasterosteus_aculeatus
ENSSPUG00000007341	TNRC6C	92	91.923	ENSGAGG00000022043	TNRC6C	80	91.992	Gopherus_agassizii
ENSSPUG00000007341	TNRC6C	98	86.329	ENSGGOG00000011304	TNRC6C	83	85.496	Gorilla_gorilla
ENSSPUG00000007341	TNRC6C	95	50.732	ENSHBUG00000010846	tnrc6c1	78	55.714	Haplochromis_burtoni
ENSSPUG00000007341	TNRC6C	98	83.322	ENSHGLG00000004809	TNRC6C	79	83.739	Heterocephalus_glaber_female
ENSSPUG00000007341	TNRC6C	98	83.530	ENSHGLG00100012597	TNRC6C	79	84.434	Heterocephalus_glaber_male
ENSSPUG00000007341	TNRC6C	93	67.347	ENSIPUG00000000818	tnrc6c1	79	68.085	Ictalurus_punctatus
ENSSPUG00000007341	TNRC6C	98	83.484	ENSSTOG00000009101	TNRC6C	80	84.108	Ictidomys_tridecemlineatus
ENSSPUG00000007341	TNRC6C	98	81.597	ENSJJAG00000017055	Tnrc6c	80	81.458	Jaculus_jaculus
ENSSPUG00000007341	TNRC6C	91	73.810	ENSKMAG00000021023	tnrc6c1	78	74.468	Kryptolebias_marmoratus
ENSSPUG00000007341	TNRC6C	85	80.368	ENSLACG00000015283	TNRC6C	75	82.447	Latimeria_chalumnae
ENSSPUG00000007341	TNRC6C	98	60.316	ENSLOCG00000013377	tnrc6c1	82	61.855	Lepisosteus_oculatus
ENSSPUG00000007341	TNRC6C	98	84.100	ENSLAFG00000011122	TNRC6C	80	84.100	Loxodonta_africana
ENSSPUG00000007341	TNRC6C	98	87.014	ENSMFAG00000043943	TNRC6C	83	86.944	Macaca_fascicularis
ENSSPUG00000007341	TNRC6C	98	86.458	ENSMMUG00000011924	TNRC6C	82	84.200	Macaca_mulatta
ENSSPUG00000007341	TNRC6C	98	87.014	ENSMNEG00000030405	TNRC6C	81	87.500	Macaca_nemestrina
ENSSPUG00000007341	TNRC6C	98	87.014	ENSMLEG00000033436	TNRC6C	83	86.944	Mandrillus_leucophaeus
ENSSPUG00000007341	TNRC6C	91	62.069	ENSMAMG00000023613	tnrc6c1	86	55.348	Mastacembelus_armatus
ENSSPUG00000007341	TNRC6C	95	51.862	ENSMZEG00005010920	tnrc6c1	79	55.714	Maylandia_zebra
ENSSPUG00000007341	TNRC6C	98	91.743	ENSMGAG00000003906	TNRC6C	80	91.743	Meleagris_gallopavo
ENSSPUG00000007341	TNRC6C	91	81.181	ENSMAUG00000021618	Tnrc6c	82	81.389	Mesocricetus_auratus
ENSSPUG00000007341	TNRC6C	98	87.283	ENSMICG00000003952	TNRC6C	83	87.213	Microcebus_murinus
ENSSPUG00000007341	TNRC6C	98	82.639	ENSMOCG00000015879	Tnrc6c	80	82.431	Microtus_ochrogaster
ENSSPUG00000007341	TNRC6C	87	54.412	ENSMMOG00000005203	tnrc6c1	84	53.826	Mola_mola
ENSSPUG00000007341	TNRC6C	99	85.081	ENSMODG00000001785	TNRC6C	82	84.610	Monodelphis_domestica
ENSSPUG00000007341	TNRC6C	98	82.639	MGP_CAROLIEiJ_G0017465	Tnrc6c	80	82.431	Mus_caroli
ENSSPUG00000007341	TNRC6C	98	82.292	ENSMUSG00000025571	Tnrc6c	80	82.083	Mus_musculus
ENSSPUG00000007341	TNRC6C	98	82.500	MGP_PahariEiJ_G0018593	Tnrc6c	80	82.292	Mus_pahari
ENSSPUG00000007341	TNRC6C	98	82.292	MGP_SPRETEiJ_G0018309	Tnrc6c	80	82.083	Mus_spretus
ENSSPUG00000007341	TNRC6C	91	84.203	ENSMPUG00000013348	TNRC6C	79	84.203	Mustela_putorius_furo
ENSSPUG00000007341	TNRC6C	98	78.037	ENSMLUG00000014431	TNRC6C	79	77.992	Myotis_lucifugus
ENSSPUG00000007341	TNRC6C	98	82.418	ENSNGAG00000012203	Tnrc6c	79	82.696	Nannospalax_galili
ENSSPUG00000007341	TNRC6C	90	54.346	ENSNBRG00000005344	tnrc6c1	80	51.282	Neolamprologus_brichardi
ENSSPUG00000007341	TNRC6C	98	84.236	ENSNLEG00000000047	TNRC6C	81	84.514	Nomascus_leucogenys
ENSSPUG00000007341	TNRC6C	91	76.865	ENSMEUG00000005104	TNRC6C	82	76.312	Notamacropus_eugenii
ENSSPUG00000007341	TNRC6C	91	83.113	ENSODEG00000012499	TNRC6C	82	83.808	Octodon_degus
ENSSPUG00000007341	TNRC6C	98	51.093	ENSONIG00000002210	tnrc6c1	96	53.284	Oreochromis_niloticus
ENSSPUG00000007341	TNRC6C	98	71.556	ENSOANG00000009758	-	80	71.684	Ornithorhynchus_anatinus
ENSSPUG00000007341	TNRC6C	77	80.612	ENSOCUG00000006122	TNRC6C	72	75.472	Oryctolagus_cuniculus
ENSSPUG00000007341	TNRC6C	88	50.809	ENSORLG00000009837	tnrc6c1	100	70.632	Oryzias_latipes
ENSSPUG00000007341	TNRC6C	88	51.652	ENSORLG00020016510	tnrc6c1	84	49.604	Oryzias_latipes_hni
ENSSPUG00000007341	TNRC6C	65	46.514	ENSORLG00015000171	tnrc6c1	78	43.722	Oryzias_latipes_hsok
ENSSPUG00000007341	TNRC6C	88	52.699	ENSOMEG00000000357	tnrc6c1	79	53.069	Oryzias_melastigma
ENSSPUG00000007341	TNRC6C	91	84.781	ENSOGAG00000007197	TNRC6C	83	85.198	Otolemur_garnettii
ENSSPUG00000007341	TNRC6C	93	79.371	ENSOARG00000006041	TNRC6C	78	79.956	Ovis_aries
ENSSPUG00000007341	TNRC6C	98	86.667	ENSPPAG00000027160	TNRC6C	83	86.597	Pan_paniscus
ENSSPUG00000007341	TNRC6C	98	85.010	ENSPPRG00000018881	TNRC6C	80	85.010	Panthera_pardus
ENSSPUG00000007341	TNRC6C	89	70.588	ENSPTIG00000008791	TNRC6C	74	70.588	Panthera_tigris_altaica
ENSSPUG00000007341	TNRC6C	98	86.667	ENSPTRG00000009699	TNRC6C	83	86.597	Pan_troglodytes
ENSSPUG00000007341	TNRC6C	98	87.014	ENSPANG00000019994	TNRC6C	81	87.500	Papio_anubis
ENSSPUG00000007341	TNRC6C	65	62.852	ENSPKIG00000005428	tnrc6c1	86	55.023	Paramormyrops_kingsleyae
ENSSPUG00000007341	TNRC6C	94	85.685	ENSPSIG00000018069	TNRC6C	82	85.887	Pelodiscus_sinensis
ENSSPUG00000007341	TNRC6C	69	58.140	ENSPMGG00000022911	tnrc6c1	97	65.306	Periophthalmus_magnuspinnatus
ENSSPUG00000007341	TNRC6C	98	82.569	ENSPEMG00000009785	Tnrc6c	82	80.208	Peromyscus_maniculatus_bairdii
ENSSPUG00000007341	TNRC6C	92	100.000	ENSPFOG00000012560	tnrc6c1	75	86.486	Poecilia_formosa
ENSSPUG00000007341	TNRC6C	90	53.982	ENSPLAG00000021055	tnrc6c1	85	54.391	Poecilia_latipinna
ENSSPUG00000007341	TNRC6C	98	86.389	ENSPPYG00000008679	TNRC6C	79	86.875	Pongo_abelii
ENSSPUG00000007341	TNRC6C	80	85.106	ENSPCAG00000012510	TNRC6C	71	85.537	Procavia_capensis
ENSSPUG00000007341	TNRC6C	91	87.153	ENSPCOG00000021451	TNRC6C	83	87.708	Propithecus_coquereli
ENSSPUG00000007341	TNRC6C	86	86.441	ENSPVAG00000002008	TNRC6C	75	86.441	Pteropus_vampyrus
ENSSPUG00000007341	TNRC6C	90	52.449	ENSPNYG00000014477	tnrc6c1	85	51.282	Pundamilia_nyererei
ENSSPUG00000007341	TNRC6C	94	79.946	ENSRNOG00000022395	Tnrc6c	85	80.416	Rattus_norvegicus
ENSSPUG00000007341	TNRC6C	98	87.083	ENSRBIG00000027777	TNRC6C	83	87.014	Rhinopithecus_bieti
ENSSPUG00000007341	TNRC6C	98	87.014	ENSRROG00000042912	TNRC6C	83	86.944	Rhinopithecus_roxellana
ENSSPUG00000007341	TNRC6C	99	84.362	ENSSBOG00000023981	TNRC6C	85	84.295	Saimiri_boliviensis_boliviensis
ENSSPUG00000007341	TNRC6C	59	92.926	ENSSHAG00000018330	-	100	92.176	Sarcophilus_harrisii
ENSSPUG00000007341	TNRC6C	90	61.765	ENSSFOG00015006475	tnrc6c1	80	86.486	Scleropages_formosus
ENSSPUG00000007341	TNRC6C	84	56.887	ENSSFOG00015004735	-	99	60.199	Scleropages_formosus
ENSSPUG00000007341	TNRC6C	91	52.910	ENSSMAG00000012761	tnrc6c1	92	47.855	Scophthalmus_maximus
ENSSPUG00000007341	TNRC6C	88	54.300	ENSSDUG00000002366	tnrc6c1	80	54.448	Seriola_dumerili
ENSSPUG00000007341	TNRC6C	88	52.471	ENSSLDG00000025613	tnrc6c1	85	52.322	Seriola_lalandi_dorsalis
ENSSPUG00000007341	TNRC6C	81	89.916	ENSSARG00000006816	TNRC6C	71	89.916	Sorex_araneus
ENSSPUG00000007341	TNRC6C	91	52.296	ENSSPAG00000014977	tnrc6c1	84	49.787	Stegastes_partitus
ENSSPUG00000007341	TNRC6C	87	86.682	ENSSSCG00000034373	TNRC6C	82	88.130	Sus_scrofa
ENSSPUG00000007341	TNRC6C	91	89.917	ENSTGUG00000007733	TNRC6C	80	90.056	Taeniopygia_guttata
ENSSPUG00000007341	TNRC6C	87	54.767	ENSTRUG00000011685	tnrc6c1	85	53.753	Takifugu_rubripes
ENSSPUG00000007341	TNRC6C	88	52.753	ENSTNIG00000005273	tnrc6c1	100	61.127	Tetraodon_nigroviridis
ENSSPUG00000007341	TNRC6C	71	79.137	ENSTBEG00000005046	TNRC6C	95	79.257	Tupaia_belangeri
ENSSPUG00000007341	TNRC6C	91	83.079	ENSTTRG00000010828	TNRC6C	80	83.010	Tursiops_truncatus
ENSSPUG00000007341	TNRC6C	98	84.594	ENSUMAG00000013614	TNRC6C	80	84.525	Ursus_maritimus
ENSSPUG00000007341	TNRC6C	58	73.348	ENSVPAG00000006765	-	99	73.224	Vicugna_pacos
ENSSPUG00000007341	TNRC6C	91	83.947	ENSVVUG00000015268	TNRC6C	82	83.947	Vulpes_vulpes
ENSSPUG00000007341	TNRC6C	91	73.829	ENSXETG00000019470	tnrc6c	83	73.554	Xenopus_tropicalis
ENSSPUG00000007341	TNRC6C	92	100.000	ENSXMAG00000025971	tnrc6c1	79	86.486	Xiphophorus_maculatus