EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000007467 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Plus strand
Length
18355 bases
Position
chrQEPC01010552.1:3355860-3374214
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000009780GTP_EFTUPF00009.271.3e-4711
ENSSPUP00000009788GTP_EFTUPF00009.271.3e-4711
ENSSPUP00000009768GTP_EFTUPF00009.271.4e-4711
ENSSPUP00000009738GTP_EFTUPF00009.271.4e-4711
ENSSPUP00000009760GTP_EFTUPF00009.271.5e-4711
ENSSPUP00000009780GTP_EFTU_D2PF03144.252.9e-1111
ENSSPUP00000009738GTP_EFTU_D2PF03144.252.9e-1111
ENSSPUP00000009760GTP_EFTU_D2PF03144.252.9e-1111
ENSSPUP00000009788GTP_EFTU_D2PF03144.253e-1111
ENSSPUP00000009768GTP_EFTU_D2PF03144.253e-1111
ENSSPUP00000009738GTP_EFTU_D3PF03143.173.2e-3811
ENSSPUP00000009780GTP_EFTU_D3PF03143.173.2e-3811
ENSSPUP00000009760GTP_EFTU_D3PF03143.173.3e-3811
ENSSPUP00000009788GTP_EFTU_D3PF03143.173.3e-3811
ENSSPUP00000009768GTP_EFTU_D3PF03143.173.3e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000010382-1380-ENSSPUP00000009738459 (aa)--
ENSSPUT00000010404-1392-ENSSPUP00000009760463 (aa)--
ENSSPUT00000010425-1380-ENSSPUP00000009780459 (aa)--
ENSSPUT00000010434-1398-ENSSPUP00000009788465 (aa)--
ENSSPUT00000010413-1401-ENSSPUP00000009768466 (aa)--
Gene Model
Click here to download ENSSPUG00000007467's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007467's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000007467-8532.911ENSSPUG00000007536GSPT16332.911
ENSSPUG00000007467-5363.306ENSSPUG00000003644-9863.306
ENSSPUG00000007467-9537.415ENSSPUG00000012389HBS1L6336.913
ENSSPUG00000007467-9869.027ENSSPUG00000018156-9769.507
ENSSPUG00000007467-9867.920ENSSPUG00000000783EEF1A29768.233
ENSSPUG00000007467-9867.699ENSSPUG00000003655-9768.161
ENSSPUG00000007467-9867.035ENSSPUG00000003622-9867.035
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000007467-9971.116ENSAPOG00000016459si:dkey-37o8.19971.840Acanthochromis_polyacanthus
ENSSPUG00000007467-9669.476ENSACIG00000020985si:dkey-37o8.18169.977Amphilophus_citrinellus
ENSSPUG00000007467-9772.809ENSAOCG00000002663si:dkey-37o8.19772.809Amphiprion_ocellaris
ENSSPUG00000007467-9772.809ENSAPEG00000012670si:dkey-37o8.19772.809Amphiprion_percula
ENSSPUG00000007467-9172.249ENSATEG00000002217si:dkey-37o8.19971.971Anabas_testudineus
ENSSPUG00000007467-9971.179ENSACLG00000003519si:dkey-37o8.19971.179Astatotilapia_calliptera
ENSSPUG00000007467-9972.210ENSAMXG00000002728si:dkey-37o8.19972.210Astyanax_mexicanus
ENSSPUG00000007467-9985.307ENSCPBG00000020570-9284.188Chrysemys_picta_bellii
ENSSPUG00000007467-9967.826ENSCSEG00000019807si:dkey-37o8.19967.974Cynoglossus_semilaevis
ENSSPUG00000007467-9871.556ENSCVAG00000009828si:dkey-37o8.19971.556Cyprinodon_variegatus
ENSSPUG00000007467-9671.526ENSDARG00000071727si:dkey-37o8.19271.267Danio_rerio
ENSSPUG00000007467-9971.116ENSELUG00000007495si:dkey-37o8.19971.116Esox_lucius
ENSSPUG00000007467-9970.199ENSFHEG00000017452si:dkey-37o8.19970.199Fundulus_heteroclitus
ENSSPUG00000007467-9868.000ENSGMOG00000006122si:dkey-37o8.19968.000Gadus_morhua
ENSSPUG00000007467-9866.964ENSGAFG00000000367si:dkey-37o8.19967.191Gambusia_affinis
ENSSPUG00000007467-10067.974ENSGACG00000004505si:dkey-37o8.19968.874Gasterosteus_aculeatus
ENSSPUG00000007467-10085.408ENSGAGG00000007724-10085.408Gopherus_agassizii
ENSSPUG00000007467-9971.397ENSHBUG00000015515si:dkey-37o8.19971.397Haplochromis_burtoni
ENSSPUG00000007467-9568.192ENSHCOG00000001215si:dkey-37o8.19867.720Hippocampus_comes
ENSSPUG00000007467-9872.727ENSIPUG00000004067si:dkey-37o8.19872.727Ictalurus_punctatus
ENSSPUG00000007467-9871.333ENSKMAG00000015910si:dkey-37o8.19971.082Kryptolebias_marmoratus
ENSSPUG00000007467-9871.619ENSLBEG00000021334si:dkey-37o8.19071.366Labrus_bergylta
ENSSPUG00000007467-9975.276ENSLACG00000003948si:dkey-37o8.19974.620Latimeria_chalumnae
ENSSPUG00000007467-9873.009ENSLOCG00000011245si:dkey-37o8.19873.497Lepisosteus_oculatus
ENSSPUG00000007467-9666.893ENSMAMG00000009907si:dkey-37o8.19266.893Mastacembelus_armatus
ENSSPUG00000007467-9971.179ENSMZEG00005018358si:dkey-37o8.19971.179Maylandia_zebra
ENSSPUG00000007467-9870.796ENSMMOG00000004111si:dkey-37o8.19870.796Mola_mola
ENSSPUG00000007467-9570.345ENSMALG00000017152si:dkey-37o8.110069.932Monopterus_albus
ENSSPUG00000007467-9971.179ENSNBRG00000013552si:dkey-37o8.19971.179Neolamprologus_brichardi
ENSSPUG00000007467-9970.524ENSONIG00000006165si:dkey-37o8.19970.524Oreochromis_niloticus
ENSSPUG00000007467-9871.681ENSORLG00000019066si:dkey-37o8.19971.681Oryzias_latipes
ENSSPUG00000007467-9871.681ENSORLG00020008094si:dkey-37o8.19971.681Oryzias_latipes_hni
ENSSPUG00000007467-9871.903ENSORLG00015008410si:dkey-37o8.19971.903Oryzias_latipes_hsok
ENSSPUG00000007467-9971.302ENSOMEG00000001868si:dkey-37o8.19972.000Oryzias_melastigma
ENSSPUG00000007467-9673.804ENSPKIG00000017246si:dkey-37o8.19673.804Paramormyrops_kingsleyae
ENSSPUG00000007467-6080.212ENSPSIG00000008080-9980.212Pelodiscus_sinensis
ENSSPUG00000007467-9870.889ENSPFOG00000013173si:dkey-37o8.19970.640Poecilia_formosa
ENSSPUG00000007467-9570.091ENSPLAG00000010405si:dkey-37o8.19870.246Poecilia_latipinna
ENSSPUG00000007467-9870.667ENSPMEG00000015233si:dkey-37o8.19970.419Poecilia_mexicana
ENSSPUG00000007467-9870.444ENSPREG00000006280si:dkey-37o8.19970.444Poecilia_reticulata
ENSSPUG00000007467-9970.524ENSPNYG00000002059si:dkey-37o8.19970.524Pundamilia_nyererei
ENSSPUG00000007467-9673.804ENSPNAG00000009990si:dkey-37o8.19773.529Pygocentrus_nattereri
ENSSPUG00000007467-9774.718ENSSFOG00015019070si:dkey-37o8.19874.550Scleropages_formosus
ENSSPUG00000007467-9970.742ENSSMAG00000016143si:dkey-37o8.19971.239Scophthalmus_maximus
ENSSPUG00000007467-9970.640ENSSDUG00000009163si:dkey-37o8.19970.640Seriola_dumerili
ENSSPUG00000007467-9970.861ENSSLDG00000023761si:dkey-37o8.19970.861Seriola_lalandi_dorsalis
ENSSPUG00000007467-9772.584ENSSPAG00000013856si:dkey-37o8.19772.584Stegastes_partitus
ENSSPUG00000007467-9872.383ENSTRUG00000009006si:dkey-37o8.19972.646Takifugu_rubripes
ENSSPUG00000007467-9970.460ENSTNIG00000017138si:dkey-37o8.19870.460Tetraodon_nigroviridis
ENSSPUG00000007467-10075.699ENSXETG0000001774442Sp5010075.699Xenopus_tropicalis
ENSSPUG00000007467-9870.667ENSXCOG00000012296si:dkey-37o8.19970.667Xiphophorus_couchianus
ENSSPUG00000007467-9970.861ENSXMAG00000001998si:dkey-37o8.19970.861Xiphophorus_maculatus

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