EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007515 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 17757 bases
Position: chrQEPC01005573.1:214300-232056
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009723	RRM_1	PF00076.22	1.1e-40	1	3
ENSSPUP00000009723	RRM_1	PF00076.22	1.1e-40	2	3
ENSSPUP00000009723	RRM_1	PF00076.22	1.1e-40	3	3
ENSSPUP00000009720	RRM_1	PF00076.22	1.8e-40	1	3
ENSSPUP00000009720	RRM_1	PF00076.22	1.8e-40	2	3
ENSSPUP00000009720	RRM_1	PF00076.22	1.8e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000010364	RBM47-201	1764	-	ENSSPUP00000009720	587 (aa)	-	-
ENSSPUT00000010367	RBM47-202	1557	-	ENSSPUP00000009723	518 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007515	RBM47	60	71.383	ENSSPUG00000004773	-	65	71.383
ENSSPUG00000007515	RBM47	62	52.632	ENSSPUG00000010725	SYNCRIP	80	44.978
ENSSPUG00000007515	RBM47	60	71.383	ENSSPUG00000012525	-	58	71.154
ENSSPUG00000007515	RBM47	61	54.517	ENSSPUG00000004565	HNRNPR	65	48.403
ENSSPUG00000007515	RBM47	61	69.470	ENSSPUG00000006797	A1CF	71	59.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007515	RBM47	100	91.176	ENSG00000163694	RBM47	100	90.323	Homo_sapiens
ENSSPUG00000007515	RBM47	100	84.392	ENSAPOG00000011062	rbm47	100	83.947	Acanthochromis_polyacanthus
ENSSPUG00000007515	RBM47	100	89.333	ENSAMEG00000009672	RBM47	100	86.500	Ailuropoda_melanoleuca
ENSSPUG00000007515	RBM47	100	84.392	ENSACIG00000011531	rbm47	100	83.947	Amphilophus_citrinellus
ENSSPUG00000007515	RBM47	100	84.392	ENSAOCG00000022245	rbm47	100	83.947	Amphiprion_ocellaris
ENSSPUG00000007515	RBM47	100	84.392	ENSAPEG00000018304	rbm47	100	83.947	Amphiprion_percula
ENSSPUG00000007515	RBM47	100	82.308	ENSATEG00000018400	rbm47	100	82.308	Anabas_testudineus
ENSSPUG00000007515	RBM47	100	93.386	ENSAPLG00000013974	RBM47	100	89.112	Anas_platyrhynchos
ENSSPUG00000007515	RBM47	100	90.451	ENSACAG00000011833	RBM47	100	89.000	Anolis_carolinensis
ENSSPUG00000007515	RBM47	100	91.176	ENSANAG00000029440	RBM47	100	87.940	Aotus_nancymaae
ENSSPUG00000007515	RBM47	100	82.990	ENSACLG00000016902	rbm47	100	82.990	Astatotilapia_calliptera
ENSSPUG00000007515	RBM47	100	81.841	ENSAMXG00000021794	rbm47	100	82.353	Astyanax_mexicanus
ENSSPUG00000007515	RBM47	100	89.096	ENSBTAG00000002356	RBM47	100	88.403	Bos_taurus
ENSSPUG00000007515	RBM47	100	90.909	ENSCJAG00000019385	RBM47	100	87.690	Callithrix_jacchus
ENSSPUG00000007515	RBM47	96	88.952	ENSCAFG00000015898	RBM47	100	85.427	Canis_familiaris
ENSSPUG00000007515	RBM47	82	87.755	ENSCAFG00020010558	RBM47	94	87.003	Canis_lupus_dingo
ENSSPUG00000007515	RBM47	100	89.096	ENSCHIG00000026214	RBM47	100	88.403	Capra_hircus
ENSSPUG00000007515	RBM47	70	90.411	ENSTSYG00000033612	RBM47	93	74.219	Carlito_syrichta
ENSSPUG00000007515	RBM47	100	80.000	ENSCAPG00000008426	RBM47	100	80.336	Cavia_aperea
ENSSPUG00000007515	RBM47	100	89.067	ENSCPOG00000014100	RBM47	100	86.050	Cavia_porcellus
ENSSPUG00000007515	RBM47	99	60.101	ENSCCAG00000024397	-	99	60.774	Cebus_capucinus
ENSSPUG00000007515	RBM47	100	91.444	ENSCCAG00000030129	-	100	88.027	Cebus_capucinus
ENSSPUG00000007515	RBM47	100	91.176	ENSCATG00000042064	RBM47	100	88.494	Cercocebus_atys
ENSSPUG00000007515	RBM47	100	89.333	ENSCLAG00000001684	RBM47	100	86.364	Chinchilla_lanigera
ENSSPUG00000007515	RBM47	100	91.176	ENSCSAG00000017060	RBM47	100	87.772	Chlorocebus_sabaeus
ENSSPUG00000007515	RBM47	89	84.424	ENSCHOG00000011731	RBM47	88	84.424	Choloepus_hoffmanni
ENSSPUG00000007515	RBM47	100	96.277	ENSCPBG00000013831	RBM47	100	94.631	Chrysemys_picta_bellii
ENSSPUG00000007515	RBM47	100	91.176	ENSCANG00000019997	RBM47	100	88.494	Colobus_angolensis_palliatus
ENSSPUG00000007515	RBM47	100	80.114	ENSCGRG00001020102	-	100	79.924	Cricetulus_griseus_chok1gshd
ENSSPUG00000007515	RBM47	100	87.831	ENSCGRG00001000623	-	100	84.333	Cricetulus_griseus_chok1gshd
ENSSPUG00000007515	RBM47	100	87.302	ENSCGRG00000007762	-	100	84.810	Cricetulus_griseus_crigri
ENSSPUG00000007515	RBM47	100	79.924	ENSCGRG00000014760	-	100	79.735	Cricetulus_griseus_crigri
ENSSPUG00000007515	RBM47	100	75.585	ENSCSEG00000004545	rbm47	100	82.461	Cynoglossus_semilaevis
ENSSPUG00000007515	RBM47	100	82.447	ENSCVAG00000020144	rbm47	100	84.474	Cyprinodon_variegatus
ENSSPUG00000007515	RBM47	96	79.965	ENSDARG00000061985	rbm47	100	82.776	Danio_rerio
ENSSPUG00000007515	RBM47	100	89.096	ENSDNOG00000046854	RBM47	100	88.325	Dasypus_novemcinctus
ENSSPUG00000007515	RBM47	100	88.654	ENSDORG00000010144	Rbm47	100	86.522	Dipodomys_ordii
ENSSPUG00000007515	RBM47	100	87.831	ENSETEG00000009194	RBM47	100	87.145	Echinops_telfairi
ENSSPUG00000007515	RBM47	99	71.467	ENSEBUG00000011912	rbm47	99	71.467	Eptatretus_burgeri
ENSSPUG00000007515	RBM47	100	88.830	ENSEASG00005008443	RBM47	100	88.235	Equus_asinus_asinus
ENSSPUG00000007515	RBM47	100	88.830	ENSECAG00000004400	RBM47	100	88.235	Equus_caballus
ENSSPUG00000007515	RBM47	75	88.745	ENSEEUG00000001194	RBM47	75	88.745	Erinaceus_europaeus
ENSSPUG00000007515	RBM47	100	80.506	ENSELUG00000006148	rbm47	100	80.353	Esox_lucius
ENSSPUG00000007515	RBM47	100	89.333	ENSFCAG00000012399	RBM47	100	88.027	Felis_catus
ENSSPUG00000007515	RBM47	100	93.351	ENSFALG00000002861	RBM47	100	91.472	Ficedula_albicollis
ENSSPUG00000007515	RBM47	100	86.933	ENSFDAG00000016326	RBM47	100	85.497	Fukomys_damarensis
ENSSPUG00000007515	RBM47	96	86.479	ENSFHEG00000007938	rbm47	100	77.740	Fundulus_heteroclitus
ENSSPUG00000007515	RBM47	100	79.597	ENSGMOG00000014802	rbm47	100	79.597	Gadus_morhua
ENSSPUG00000007515	RBM47	72	93.351	ENSGALG00000014267	RBM47	99	94.149	Gallus_gallus
ENSSPUG00000007515	RBM47	72	84.309	ENSGAFG00000020571	rbm47	98	84.309	Gambusia_affinis
ENSSPUG00000007515	RBM47	100	78.571	ENSGACG00000016223	rbm47	100	78.974	Gasterosteus_aculeatus
ENSSPUG00000007515	RBM47	100	96.011	ENSGAGG00000020051	RBM47	100	94.631	Gopherus_agassizii
ENSSPUG00000007515	RBM47	100	91.176	ENSGGOG00000001367	RBM47	100	88.494	Gorilla_gorilla
ENSSPUG00000007515	RBM47	100	82.990	ENSHBUG00000003520	rbm47	100	82.990	Haplochromis_burtoni
ENSSPUG00000007515	RBM47	100	66.095	ENSHGLG00000016914	RBM47	100	85.443	Heterocephalus_glaber_female
ENSSPUG00000007515	RBM47	100	83.467	ENSHGLG00100003071	-	100	77.104	Heterocephalus_glaber_male
ENSSPUG00000007515	RBM47	100	87.566	ENSHGLG00100014028	-	100	85.443	Heterocephalus_glaber_male
ENSSPUG00000007515	RBM47	99	77.066	ENSHCOG00000002074	rbm47	99	83.333	Hippocampus_comes
ENSSPUG00000007515	RBM47	100	83.422	ENSIPUG00000004743	rbm47	100	82.979	Ictalurus_punctatus
ENSSPUG00000007515	RBM47	100	88.267	ENSSTOG00000004727	RBM47	100	86.455	Ictidomys_tridecemlineatus
ENSSPUG00000007515	RBM47	100	88.594	ENSJJAG00000013823	Rbm47	100	86.000	Jaculus_jaculus
ENSSPUG00000007515	RBM47	100	84.169	ENSKMAG00000000084	rbm47	100	83.727	Kryptolebias_marmoratus
ENSSPUG00000007515	RBM47	100	82.804	ENSLBEG00000008436	rbm47	100	76.846	Labrus_bergylta
ENSSPUG00000007515	RBM47	100	89.628	ENSLACG00000007196	RBM47	100	85.811	Latimeria_chalumnae
ENSSPUG00000007515	RBM47	100	88.503	ENSLOCG00000012966	rbm47	95	85.399	Lepisosteus_oculatus
ENSSPUG00000007515	RBM47	100	89.600	ENSLAFG00000011998	RBM47	100	87.905	Loxodonta_africana
ENSSPUG00000007515	RBM47	100	91.176	ENSMFAG00000037967	RBM47	100	88.494	Macaca_fascicularis
ENSSPUG00000007515	RBM47	100	91.176	ENSMMUG00000012036	RBM47	100	89.119	Macaca_mulatta
ENSSPUG00000007515	RBM47	100	91.176	ENSMNEG00000040774	RBM47	100	88.494	Macaca_nemestrina
ENSSPUG00000007515	RBM47	100	92.698	ENSMLEG00000041432	RBM47	100	92.698	Mandrillus_leucophaeus
ENSSPUG00000007515	RBM47	100	82.519	ENSMAMG00000019143	rbm47	100	82.519	Mastacembelus_armatus
ENSSPUG00000007515	RBM47	100	82.990	ENSMZEG00005023659	rbm47	100	82.990	Maylandia_zebra
ENSSPUG00000007515	RBM47	100	94.149	ENSMGAG00000012226	RBM47	100	92.475	Meleagris_gallopavo
ENSSPUG00000007515	RBM47	100	87.863	ENSMAUG00000006493	Rbm47	100	85.443	Mesocricetus_auratus
ENSSPUG00000007515	RBM47	100	84.327	ENSMICG00000026417	RBM47	100	85.009	Microcebus_murinus
ENSSPUG00000007515	RBM47	100	87.831	ENSMOCG00000021170	Rbm47	100	85.452	Microtus_ochrogaster
ENSSPUG00000007515	RBM47	100	80.463	ENSMMOG00000007260	rbm47	100	80.463	Mola_mola
ENSSPUG00000007515	RBM47	100	93.867	ENSMODG00000007003	RBM47	100	89.262	Monodelphis_domestica
ENSSPUG00000007515	RBM47	60	82.911	ENSMODG00000015426	-	98	82.911	Monodelphis_domestica
ENSSPUG00000007515	RBM47	100	86.096	ENSMODG00000020561	-	100	80.880	Monodelphis_domestica
ENSSPUG00000007515	RBM47	100	81.746	ENSMALG00000005167	rbm47	100	82.632	Monopterus_albus
ENSSPUG00000007515	RBM47	100	88.095	MGP_CAROLIEiJ_G0027258	Rbm47	100	85.595	Mus_caroli
ENSSPUG00000007515	RBM47	100	88.360	ENSMUSG00000070780	Rbm47	100	85.930	Mus_musculus
ENSSPUG00000007515	RBM47	100	87.831	MGP_PahariEiJ_G0017040	Rbm47	100	85.595	Mus_pahari
ENSSPUG00000007515	RBM47	100	88.360	MGP_SPRETEiJ_G0028253	Rbm47	100	86.364	Mus_spretus
ENSSPUG00000007515	RBM47	100	90.133	ENSMPUG00000006177	RBM47	94	87.270	Mustela_putorius_furo
ENSSPUG00000007515	RBM47	100	88.594	ENSMLUG00000000889	RBM47	100	87.227	Myotis_lucifugus
ENSSPUG00000007515	RBM47	100	88.830	ENSNGAG00000003325	Rbm47	100	86.311	Nannospalax_galili
ENSSPUG00000007515	RBM47	100	83.077	ENSNBRG00000015092	rbm47	100	83.077	Neolamprologus_brichardi
ENSSPUG00000007515	RBM47	100	91.176	ENSNLEG00000017151	RBM47	100	88.156	Nomascus_leucogenys
ENSSPUG00000007515	RBM47	69	95.000	ENSMEUG00000009516	-	100	88.578	Notamacropus_eugenii
ENSSPUG00000007515	RBM47	85	92.500	ENSOPRG00000016507	-	75	92.500	Ochotona_princeps
ENSSPUG00000007515	RBM47	100	89.333	ENSODEG00000004873	RBM47	100	86.700	Octodon_degus
ENSSPUG00000007515	RBM47	100	81.934	ENSONIG00000009061	rbm47	100	81.934	Oreochromis_niloticus
ENSSPUG00000007515	RBM47	100	88.512	ENSOANG00000008978	RBM47	100	87.227	Ornithorhynchus_anatinus
ENSSPUG00000007515	RBM47	100	88.564	ENSOCUG00000012034	RBM47	100	87.563	Oryctolagus_cuniculus
ENSSPUG00000007515	RBM47	100	83.598	ENSORLG00000005847	rbm47	100	83.158	Oryzias_latipes
ENSSPUG00000007515	RBM47	100	83.598	ENSORLG00020005154	rbm47	100	83.158	Oryzias_latipes_hni
ENSSPUG00000007515	RBM47	100	83.333	ENSORLG00015000066	rbm47	100	82.895	Oryzias_latipes_hsok
ENSSPUG00000007515	RBM47	100	83.333	ENSOMEG00000010730	rbm47	100	82.895	Oryzias_melastigma
ENSSPUG00000007515	RBM47	100	89.867	ENSOGAG00000029367	-	100	87.270	Otolemur_garnettii
ENSSPUG00000007515	RBM47	100	83.733	ENSOGAG00000025193	-	100	81.450	Otolemur_garnettii
ENSSPUG00000007515	RBM47	100	78.824	ENSOARG00000012711	RBM47	100	80.168	Ovis_aries
ENSSPUG00000007515	RBM47	100	91.176	ENSPPAG00000029763	RBM47	100	88.325	Pan_paniscus
ENSSPUG00000007515	RBM47	100	83.980	ENSPPRG00000012873	RBM47	99	89.867	Panthera_pardus
ENSSPUG00000007515	RBM47	85	85.571	ENSPTIG00000017046	RBM47	100	86.573	Panthera_tigris_altaica
ENSSPUG00000007515	RBM47	100	91.176	ENSPTRG00000016006	RBM47	100	88.494	Pan_troglodytes
ENSSPUG00000007515	RBM47	100	91.176	ENSPANG00000005980	RBM47	100	88.494	Papio_anubis
ENSSPUG00000007515	RBM47	96	85.552	ENSPKIG00000005037	rbm47	100	80.990	Paramormyrops_kingsleyae
ENSSPUG00000007515	RBM47	99	78.462	ENSPKIG00000013431	RBM47	98	78.545	Paramormyrops_kingsleyae
ENSSPUG00000007515	RBM47	89	93.561	ENSPSIG00000017516	RBM47	97	93.750	Pelodiscus_sinensis
ENSSPUG00000007515	RBM47	100	75.885	ENSPMGG00000018540	rbm47	100	82.804	Periophthalmus_magnuspinnatus
ENSSPUG00000007515	RBM47	100	87.831	ENSPEMG00000011088	Rbm47	100	85.476	Peromyscus_maniculatus_bairdii
ENSSPUG00000007515	RBM47	96	85.754	ENSPFOG00000007997	rbm47	100	80.759	Poecilia_formosa
ENSSPUG00000007515	RBM47	96	85.475	ENSPLAG00000002072	rbm47	100	83.777	Poecilia_latipinna
ENSSPUG00000007515	RBM47	100	84.043	ENSPMEG00000017492	rbm47	100	83.598	Poecilia_mexicana
ENSSPUG00000007515	RBM47	96	86.479	ENSPREG00000008456	rbm47	100	84.043	Poecilia_reticulata
ENSSPUG00000007515	RBM47	98	79.133	ENSPPYG00000014688	RBM47	100	75.717	Pongo_abelii
ENSSPUG00000007515	RBM47	89	89.418	ENSPCAG00000011879	RBM47	81	90.750	Procavia_capensis
ENSSPUG00000007515	RBM47	100	85.600	ENSPCOG00000023451	RBM47	100	84.148	Propithecus_coquereli
ENSSPUG00000007515	RBM47	100	88.329	ENSPVAG00000003812	RBM47	100	87.458	Pteropus_vampyrus
ENSSPUG00000007515	RBM47	100	82.564	ENSPNYG00000022868	rbm47	100	82.564	Pundamilia_nyererei
ENSSPUG00000007515	RBM47	100	81.026	ENSPNAG00000007940	rbm47	100	81.074	Pygocentrus_nattereri
ENSSPUG00000007515	RBM47	100	88.360	ENSRNOG00000002408	Rbm47	100	85.930	Rattus_norvegicus
ENSSPUG00000007515	RBM47	100	91.176	ENSRBIG00000039601	RBM47	100	88.494	Rhinopithecus_bieti
ENSSPUG00000007515	RBM47	100	91.176	ENSRROG00000044696	RBM47	100	88.494	Rhinopithecus_roxellana
ENSSPUG00000007515	RBM47	100	86.371	ENSSBOG00000028475	RBM47	100	90.683	Saimiri_boliviensis_boliviensis
ENSSPUG00000007515	RBM47	100	93.867	ENSSHAG00000017576	RBM47	100	93.369	Sarcophilus_harrisii
ENSSPUG00000007515	RBM47	100	78.877	ENSSFOG00015024101	RBM47	100	78.457	Scleropages_formosus
ENSSPUG00000007515	RBM47	89	85.475	ENSSFOG00015012445	rbm47	100	81.748	Scleropages_formosus
ENSSPUG00000007515	RBM47	100	79.744	ENSSMAG00000009744	rbm47	100	79.744	Scophthalmus_maximus
ENSSPUG00000007515	RBM47	100	83.598	ENSSDUG00000022684	rbm47	100	83.598	Seriola_dumerili
ENSSPUG00000007515	RBM47	100	84.211	ENSSLDG00000003109	rbm47	100	84.211	Seriola_lalandi_dorsalis
ENSSPUG00000007515	RBM47	86	89.509	ENSSARG00000001735	RBM47	75	89.509	Sorex_araneus
ENSSPUG00000007515	RBM47	100	84.474	ENSSPAG00000001257	rbm47	100	84.474	Stegastes_partitus
ENSSPUG00000007515	RBM47	100	88.830	ENSSSCG00000008796	RBM47	100	88.067	Sus_scrofa
ENSSPUG00000007515	RBM47	100	93.617	ENSTGUG00000008705	RBM47	100	91.625	Taeniopygia_guttata
ENSSPUG00000007515	RBM47	100	76.094	ENSTRUG00000014050	rbm47	100	82.620	Takifugu_rubripes
ENSSPUG00000007515	RBM47	100	80.879	ENSTNIG00000006127	rbm47	100	80.463	Tetraodon_nigroviridis
ENSSPUG00000007515	RBM47	88	83.957	ENSTBEG00000001607	RBM47	76	83.957	Tupaia_belangeri
ENSSPUG00000007515	RBM47	100	89.362	ENSTTRG00000002839	RBM47	100	88.702	Tursiops_truncatus
ENSSPUG00000007515	RBM47	100	89.333	ENSUAMG00000021346	RBM47	100	87.102	Ursus_americanus
ENSSPUG00000007515	RBM47	57	85.616	ENSVPAG00000000641	-	57	85.616	Vicugna_pacos
ENSSPUG00000007515	RBM47	96	90.368	ENSVVUG00000014774	RBM47	100	85.738	Vulpes_vulpes
ENSSPUG00000007515	RBM47	100	88.714	ENSXETG00000012802	rbm47	100	85.452	Xenopus_tropicalis
ENSSPUG00000007515	RBM47	100	77.505	ENSXCOG00000000780	rbm47	100	84.043	Xiphophorus_couchianus
ENSSPUG00000007515	RBM47	100	83.598	ENSXMAG00000009874	rbm47	100	83.598	Xiphophorus_maculatus