EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007555 (Gene tree)
Gene ID: -
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 9513 bases
Position: chrQEPC01011736.1:1928291-1937803
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009794	MMR_HSR1	PF01926.23	4.1e-07	1	1
ENSSPUP00000009787	MMR_HSR1	PF01926.23	4.3e-07	1	1
ENSSPUP00000009773	MMR_HSR1	PF01926.23	4.6e-07	1	1
ENSSPUP00000009766	MMR_HSR1	PF01926.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000010440	ARL5C-204	1497	-	ENSSPUP00000009794	163 (aa)	-	-
ENSSPUT00000010433	ARL5C-203	498	-	ENSSPUP00000009787	165 (aa)	-	-
ENSSPUT00000010418	ARL5C-202	510	-	ENSSPUP00000009773	169 (aa)	-	-
ENSSPUT00000010411	ARL5C-201	516	-	ENSSPUP00000009766	171 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007555	ARL5C	60	30.392	ENSSPUG00000010896	-	51	30.476
ENSSPUG00000007555	ARL5C	93	41.830	ENSSPUG00000002363	-	83	41.401
ENSSPUG00000007555	ARL5C	98	47.170	ENSSPUG00000015988	-	92	45.783
ENSSPUG00000007555	ARL5C	99	38.012	ENSSPUG00000018502	ARFRP1	88	36.932
ENSSPUG00000007555	ARL5C	98	80.000	ENSSPUG00000003682	ARL5A	93	77.108
ENSSPUG00000007555	ARL5C	77	31.496	ENSSPUG00000010247	-	64	31.496
ENSSPUG00000007555	ARL5C	99	45.963	ENSSPUG00000002850	-	89	45.732
ENSSPUG00000007555	ARL5C	99	83.230	ENSSPUG00000014073	ARL5B	94	80.357
ENSSPUG00000007555	ARL5C	98	48.428	ENSSPUG00000000686	ARF1	92	46.988
ENSSPUG00000007555	ARL5C	65	42.991	ENSSPUG00000018364	-	96	42.991
ENSSPUG00000007555	ARL5C	87	30.822	ENSSPUG00000007980	ARL8A	76	30.612
ENSSPUG00000007555	ARL5C	98	37.195	ENSSPUG00000009412	ARL6	90	37.126
ENSSPUG00000007555	ARL5C	95	30.994	ENSSPUG00000006649	ARL13B	69	30.994
ENSSPUG00000007555	ARL5C	92	41.176	ENSSPUG00000006852	ARL11	81	41.176
ENSSPUG00000007555	ARL5C	93	46.203	ENSSPUG00000008413	ARL4A	79	46.203
ENSSPUG00000007555	ARL5C	91	43.919	ENSSPUG00000011154	ARL3	77	43.791
ENSSPUG00000007555	ARL5C	97	47.531	ENSSPUG00000004578	ARL1	93	46.154
ENSSPUG00000007555	ARL5C	77	30.496	ENSSPUG00000003222	RAB12	56	30.282
ENSSPUG00000007555	ARL5C	93	42.857	ENSSPUG00000018772	ARL14	81	42.038
ENSSPUG00000007555	ARL5C	85	47.826	ENSSPUG00000004465	-	81	46.207
ENSSPUG00000007555	ARL5C	98	47.170	ENSSPUG00000010849	-	92	45.783
ENSSPUG00000007555	ARL5C	98	40.252	ENSSPUG00000005249	-	87	40.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007555	ARL5C	100	80.982	ENSAMEG00000004195	ARL5C	95	79.532	Ailuropoda_melanoleuca
ENSSPUG00000007555	ARL5C	99	93.210	ENSACAG00000003879	-	95	89.412	Anolis_carolinensis
ENSSPUG00000007555	ARL5C	100	84.663	ENSCAFG00000016525	ARL5C	96	83.041	Canis_familiaris
ENSSPUG00000007555	ARL5C	100	82.209	ENSCHIG00000008208	ARL5C	96	80.117	Capra_hircus
ENSSPUG00000007555	ARL5C	65	83.962	ENSCHOG00000013232	-	100	83.962	Choloepus_hoffmanni
ENSSPUG00000007555	ARL5C	98	76.101	ENSCGRG00001000695	Arl5c	94	74.251	Cricetulus_griseus_chok1gshd
ENSSPUG00000007555	ARL5C	98	76.730	ENSCGRG00000007376	Arl5c	94	74.850	Cricetulus_griseus_crigri
ENSSPUG00000007555	ARL5C	100	83.436	ENSDNOG00000019741	ARL5C	94	82.249	Dasypus_novemcinctus
ENSSPUG00000007555	ARL5C	99	79.012	ENSDORG00000016304	Arl5c	95	77.647	Dipodomys_ordii
ENSSPUG00000007555	ARL5C	100	84.049	ENSEASG00005001922	ARL5C	78	82.738	Equus_asinus_asinus
ENSSPUG00000007555	ARL5C	100	84.049	ENSECAG00000009024	ARL5C	96	81.871	Equus_caballus
ENSSPUG00000007555	ARL5C	100	84.663	ENSFCAG00000009962	ARL5C	96	82.456	Felis_catus
ENSSPUG00000007555	ARL5C	100	83.436	ENSSTOG00000011104	ARL5C	95	82.353	Ictidomys_tridecemlineatus
ENSSPUG00000007555	ARL5C	100	86.503	ENSLACG00000015332	ARL5C	96	84.211	Latimeria_chalumnae
ENSSPUG00000007555	ARL5C	100	85.890	ENSLAFG00000018248	ARL5C	95	84.211	Loxodonta_africana
ENSSPUG00000007555	ARL5C	96	71.795	ENSMAUG00000012845	Arl5c	81	70.122	Mesocricetus_auratus
ENSSPUG00000007555	ARL5C	100	82.209	ENSMICG00000002661	ARL5C	96	80.702	Microcebus_murinus
ENSSPUG00000007555	ARL5C	100	71.166	ENSMOCG00000000234	Arl5c	95	69.591	Microtus_ochrogaster
ENSSPUG00000007555	ARL5C	100	80.982	MGP_CAROLIEiJ_G0017071	Arl5c	96	78.947	Mus_caroli
ENSSPUG00000007555	ARL5C	100	82.822	ENSMUSG00000038352	Arl5c	96	80.702	Mus_musculus
ENSSPUG00000007555	ARL5C	100	80.982	MGP_PahariEiJ_G0018200	Arl5c	96	78.947	Mus_pahari
ENSSPUG00000007555	ARL5C	100	81.595	MGP_SPRETEiJ_G0017917	Arl5c	96	79.532	Mus_spretus
ENSSPUG00000007555	ARL5C	100	83.436	ENSMLUG00000030149	ARL5C	95	81.287	Myotis_lucifugus
ENSSPUG00000007555	ARL5C	100	84.049	ENSOGAG00000005894	ARL5C	96	82.456	Otolemur_garnettii
ENSSPUG00000007555	ARL5C	100	82.822	ENSOARG00000010377	ARL5C	95	80.702	Ovis_aries
ENSSPUG00000007555	ARL5C	100	85.890	ENSPPRG00000000975	ARL5C	96	83.626	Panthera_pardus
ENSSPUG00000007555	ARL5C	100	86.503	ENSPTIG00000017487	ARL5C	96	84.211	Panthera_tigris_altaica
ENSSPUG00000007555	ARL5C	98	81.875	ENSPEMG00000008932	Arl5c	94	79.762	Peromyscus_maniculatus_bairdii
ENSSPUG00000007555	ARL5C	100	82.822	ENSPCOG00000028489	ARL5C	96	80.702	Propithecus_coquereli
ENSSPUG00000007555	ARL5C	99	82.822	ENSPVAG00000008495	ARL5C	95	82.822	Pteropus_vampyrus
ENSSPUG00000007555	ARL5C	100	78.528	ENSRNOG00000036880	Arl5c	96	76.608	Rattus_norvegicus
ENSSPUG00000007555	ARL5C	99	70.552	ENSSBOG00000021022	ARL5C	93	71.951	Saimiri_boliviensis_boliviensis
ENSSPUG00000007555	ARL5C	100	80.368	ENSTBEG00000007274	ARL5C	96	78.947	Tupaia_belangeri
ENSSPUG00000007555	ARL5C	100	84.663	ENSUAMG00000012299	ARL5C	96	83.041	Ursus_americanus
ENSSPUG00000007555	ARL5C	100	84.663	ENSUMAG00000017197	ARL5C	96	83.041	Ursus_maritimus
ENSSPUG00000007555	ARL5C	100	83.436	ENSXETG00000023713	arl5c	88	81.871	Xenopus_tropicalis