EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000007604 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 85964 bases
Position: chrQEPC01000136.1:735659-821622
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009973	ResIII	PF04851.15	1.6e-11	1	1
ENSSPUP00000009951	ResIII	PF04851.15	2.7e-11	1	1
ENSSPUP00000009925	ResIII	PF04851.15	2.9e-11	1	1
ENSSPUP00000009940	ResIII	PF04851.15	3e-11	1	1
ENSSPUP00000009973	DEAD	PF00270.29	7.4e-07	1	1
ENSSPUP00000009951	DEAD	PF00270.29	1.3e-06	1	1
ENSSPUP00000009925	DEAD	PF00270.29	1.4e-06	1	1
ENSSPUP00000009940	DEAD	PF00270.29	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000010575	SMARCA5-201	3042	-	ENSSPUP00000009925	1013 (aa)	-	-
ENSSPUT00000010592	SMARCA5-202	3060	-	ENSSPUP00000009940	1019 (aa)	-	-
ENSSPUT00000010627	SMARCA5-204	1218	-	ENSSPUP00000009973	405 (aa)	-	-
ENSSPUT00000010603	SMARCA5-203	2958	-	ENSSPUP00000009951	985 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000007604	SMARCA5	97	91.071	ENSSPUG00000000590	SMARCA1	94	86.763
ENSSPUG00000007604	SMARCA5	70	39.322	ENSSPUG00000004633	SMARCAD1	84	38.067
ENSSPUG00000007604	SMARCA5	64	45.455	ENSSPUG00000017425	HELLS	69	48.193
ENSSPUG00000007604	SMARCA5	72	45.000	ENSSPUG00000016865	CHD1L	61	43.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007604	SMARCA5	99	96.181	ENSG00000153147	SMARCA5	98	93.501	Homo_sapiens
ENSSPUG00000007604	SMARCA5	99	96.583	ENSAMEG00000009585	SMARCA5	97	95.088	Ailuropoda_melanoleuca
ENSSPUG00000007604	SMARCA5	97	97.959	ENSAPLG00000009206	SMARCA5	100	95.893	Anas_platyrhynchos
ENSSPUG00000007604	SMARCA5	99	95.775	ENSACAG00000003038	SMARCA5	99	93.301	Anolis_carolinensis
ENSSPUG00000007604	SMARCA5	99	96.364	ENSANAG00000019345	SMARCA5	99	96.364	Aotus_nancymaae
ENSSPUG00000007604	SMARCA5	99	96.583	ENSBTAG00000003399	SMARCA5	98	94.066	Bos_taurus
ENSSPUG00000007604	SMARCA5	99	96.281	ENSCJAG00000002735	SMARCA5	98	94.169	Callithrix_jacchus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSCAFG00000007525	SMARCA5	97	94.892	Canis_familiaris
ENSSPUG00000007604	SMARCA5	97	97.704	ENSCAFG00020025641	SMARCA5	99	92.405	Canis_lupus_dingo
ENSSPUG00000007604	SMARCA5	97	97.449	ENSCHIG00000016375	-	97	93.948	Capra_hircus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSCHIG00000013730	-	99	93.167	Capra_hircus
ENSSPUG00000007604	SMARCA5	99	96.667	ENSTSYG00000009954	SMARCA5	99	96.667	Carlito_syrichta
ENSSPUG00000007604	SMARCA5	97	95.975	ENSCAPG00000013747	SMARCA5	99	92.458	Cavia_aperea
ENSSPUG00000007604	SMARCA5	99	96.181	ENSCPOG00000002259	SMARCA5	98	93.333	Cavia_porcellus
ENSSPUG00000007604	SMARCA5	99	96.465	ENSCCAG00000027215	SMARCA5	99	96.465	Cebus_capucinus
ENSSPUG00000007604	SMARCA5	99	96.281	ENSCATG00000044917	SMARCA5	98	93.501	Cercocebus_atys
ENSSPUG00000007604	SMARCA5	100	95.984	ENSCLAG00000006153	SMARCA5	99	96.364	Chinchilla_lanigera
ENSSPUG00000007604	SMARCA5	97	96.392	ENSCSAG00000003448	SMARCA5	100	96.392	Chlorocebus_sabaeus
ENSSPUG00000007604	SMARCA5	91	95.108	ENSCHOG00000011724	SMARCA5	83	95.108	Choloepus_hoffmanni
ENSSPUG00000007604	SMARCA5	99	97.085	ENSCPBG00000027535	SMARCA5	96	97.085	Chrysemys_picta_bellii
ENSSPUG00000007604	SMARCA5	99	96.281	ENSCANG00000041629	SMARCA5	98	93.975	Colobus_angolensis_palliatus
ENSSPUG00000007604	SMARCA5	99	96.382	ENSCGRG00001012719	Smarca5	96	94.892	Cricetulus_griseus_chok1gshd
ENSSPUG00000007604	SMARCA5	99	96.566	ENSCGRG00000001417	Smarca5	99	95.992	Cricetulus_griseus_crigri
ENSSPUG00000007604	SMARCA5	99	93.869	ENSDNOG00000009158	SMARCA5	98	91.748	Dasypus_novemcinctus
ENSSPUG00000007604	SMARCA5	97	97.704	ENSDORG00000003466	Smarca5	97	87.987	Dipodomys_ordii
ENSSPUG00000007604	SMARCA5	95	89.062	ENSEBUG00000014773	SMARCA5	96	84.211	Eptatretus_burgeri
ENSSPUG00000007604	SMARCA5	99	96.583	ENSEASG00005001866	SMARCA5	98	96.247	Equus_asinus_asinus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSECAG00000002676	SMARCA5	98	93.792	Equus_caballus
ENSSPUG00000007604	SMARCA5	97	97.704	ENSEEUG00000013176	SMARCA5	99	92.222	Erinaceus_europaeus
ENSSPUG00000007604	SMARCA5	97	88.351	ENSELUG00000014653	SMARCA5	99	88.351	Esox_lucius
ENSSPUG00000007604	SMARCA5	99	96.583	ENSFCAG00000004544	SMARCA5	99	93.359	Felis_catus
ENSSPUG00000007604	SMARCA5	97	96.598	ENSFALG00000004987	SMARCA5	100	96.598	Ficedula_albicollis
ENSSPUG00000007604	SMARCA5	99	96.566	ENSFDAG00000021016	SMARCA5	99	96.566	Fukomys_damarensis
ENSSPUG00000007604	SMARCA5	97	90.537	ENSGMOG00000007519	SMARCA5	94	88.741	Gadus_morhua
ENSSPUG00000007604	SMARCA5	100	96.586	ENSGALG00000009913	SMARCA5	98	95.005	Gallus_gallus
ENSSPUG00000007604	SMARCA5	97	90.281	ENSGACG00000017238	SMARCA5	95	89.150	Gasterosteus_aculeatus
ENSSPUG00000007604	SMARCA5	99	97.186	ENSGAGG00000019882	SMARCA5	100	93.558	Gopherus_agassizii
ENSSPUG00000007604	SMARCA5	99	96.465	ENSGGOG00000012595	SMARCA5	99	96.465	Gorilla_gorilla
ENSSPUG00000007604	SMARCA5	99	96.281	ENSHGLG00000000816	-	98	93.975	Heterocephalus_glaber_female
ENSSPUG00000007604	SMARCA5	97	91.837	ENSHGLG00000000317	-	95	86.734	Heterocephalus_glaber_female
ENSSPUG00000007604	SMARCA5	99	96.465	ENSHGLG00100018421	-	99	96.465	Heterocephalus_glaber_male
ENSSPUG00000007604	SMARCA5	99	96.583	ENSSTOG00000010683	SMARCA5	96	95.285	Ictidomys_tridecemlineatus
ENSSPUG00000007604	SMARCA5	99	96.080	ENSJJAG00000014965	Smarca5	99	92.426	Jaculus_jaculus
ENSSPUG00000007604	SMARCA5	99	93.939	ENSLACG00000007091	SMARCA5	97	93.939	Latimeria_chalumnae
ENSSPUG00000007604	SMARCA5	99	91.066	ENSLOCG00000008966	SMARCA5	99	89.229	Lepisosteus_oculatus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSLAFG00000007795	SMARCA5	97	94.624	Loxodonta_africana
ENSSPUG00000007604	SMARCA5	99	96.281	ENSMFAG00000043649	SMARCA5	98	93.501	Macaca_fascicularis
ENSSPUG00000007604	SMARCA5	99	96.281	ENSMMUG00000000829	SMARCA5	97	96.312	Macaca_mulatta
ENSSPUG00000007604	SMARCA5	99	96.281	ENSMNEG00000031916	SMARCA5	98	93.501	Macaca_nemestrina
ENSSPUG00000007604	SMARCA5	99	96.281	ENSMLEG00000042393	SMARCA5	98	93.501	Mandrillus_leucophaeus
ENSSPUG00000007604	SMARCA5	99	96.683	ENSMGAG00000003517	SMARCA5	99	96.683	Meleagris_gallopavo
ENSSPUG00000007604	SMARCA5	99	96.566	ENSMAUG00000015902	Smarca5	99	94.857	Mesocricetus_auratus
ENSSPUG00000007604	SMARCA5	99	96.382	ENSMICG00000003971	SMARCA5	99	94.980	Microcebus_murinus
ENSSPUG00000007604	SMARCA5	99	95.980	ENSMOCG00000016986	-	97	94.494	Microtus_ochrogaster
ENSSPUG00000007604	SMARCA5	99	96.970	ENSMODG00000000391	SMARCA5	98	94.175	Monodelphis_domestica
ENSSPUG00000007604	SMARCA5	99	96.181	ENSMUSG00000031715	Smarca5	98	93.598	Mus_musculus
ENSSPUG00000007604	SMARCA5	99	96.281	MGP_PahariEiJ_G0022862	Smarca5	98	93.598	Mus_pahari
ENSSPUG00000007604	SMARCA5	99	96.583	ENSMLUG00000000468	SMARCA5	97	95.088	Myotis_lucifugus
ENSSPUG00000007604	SMARCA5	99	96.281	ENSNGAG00000000441	Smarca5	98	93.605	Nannospalax_galili
ENSSPUG00000007604	SMARCA5	99	96.281	ENSNLEG00000005383	SMARCA5	98	93.501	Nomascus_leucogenys
ENSSPUG00000007604	SMARCA5	95	97.656	ENSMEUG00000001267	SMARCA5	100	88.958	Notamacropus_eugenii
ENSSPUG00000007604	SMARCA5	97	90.051	ENSOPRG00000014427	SMARCA5	86	92.683	Ochotona_princeps
ENSSPUG00000007604	SMARCA5	97	96.804	ENSOANG00000013921	SMARCA5	100	96.804	Ornithorhynchus_anatinus
ENSSPUG00000007604	SMARCA5	97	96.598	ENSOCUG00000013042	SMARCA5	100	96.598	Oryctolagus_cuniculus
ENSSPUG00000007604	SMARCA5	99	96.382	ENSOGAG00000009702	SMARCA5	97	95.088	Otolemur_garnettii
ENSSPUG00000007604	SMARCA5	99	96.378	ENSOARG00000010589	SMARCA5	94	96.378	Ovis_aries
ENSSPUG00000007604	SMARCA5	99	96.364	ENSPPAG00000028523	SMARCA5	99	96.364	Pan_paniscus
ENSSPUG00000007604	SMARCA5	97	97.704	ENSPPRG00000004925	SMARCA5	96	90.873	Panthera_pardus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSPTIG00000020959	SMARCA5	97	95.635	Panthera_tigris_altaica
ENSSPUG00000007604	SMARCA5	99	96.465	ENSPTRG00000016472	SMARCA5	99	96.465	Pan_troglodytes
ENSSPUG00000007604	SMARCA5	99	96.281	ENSPANG00000001175	SMARCA5	98	93.501	Papio_anubis
ENSSPUG00000007604	SMARCA5	97	91.560	ENSPKIG00000015885	SMARCA5	100	90.000	Paramormyrops_kingsleyae
ENSSPUG00000007604	SMARCA5	97	91.049	ENSPKIG00000015699	SMARCA5	98	88.416	Paramormyrops_kingsleyae
ENSSPUG00000007604	SMARCA5	97	97.959	ENSPSIG00000004177	SMARCA5	99	95.253	Pelodiscus_sinensis
ENSSPUG00000007604	SMARCA5	97	88.980	ENSPMGG00000012316	SMARCA5	100	88.980	Periophthalmus_magnuspinnatus
ENSSPUG00000007604	SMARCA5	99	96.566	ENSPEMG00000008060	Smarca5	99	94.887	Peromyscus_maniculatus_bairdii
ENSSPUG00000007604	SMARCA5	97	87.500	ENSPMAG00000008026	SMARCA5	99	86.115	Petromyzon_marinus
ENSSPUG00000007604	SMARCA5	97	86.735	ENSPMAG00000006011	SMARCA5	80	84.640	Petromyzon_marinus
ENSSPUG00000007604	SMARCA5	99	96.970	ENSPCIG00000003926	SMARCA5	98	94.363	Phascolarctos_cinereus
ENSSPUG00000007604	SMARCA5	99	96.281	ENSPPYG00000015091	SMARCA5	98	93.501	Pongo_abelii
ENSSPUG00000007604	SMARCA5	95	91.146	ENSPCAG00000014230	SMARCA5	83	93.167	Procavia_capensis
ENSSPUG00000007604	SMARCA5	97	97.704	ENSPCOG00000026744	SMARCA5	99	93.145	Propithecus_coquereli
ENSSPUG00000007604	SMARCA5	99	96.482	ENSPVAG00000006482	SMARCA5	99	92.639	Pteropus_vampyrus
ENSSPUG00000007604	SMARCA5	99	89.282	ENSPNAG00000027824	SMARCA5	97	89.119	Pygocentrus_nattereri
ENSSPUG00000007604	SMARCA5	99	96.181	ENSRNOG00000018149	Smarca5	99	96.364	Rattus_norvegicus
ENSSPUG00000007604	SMARCA5	100	95.988	ENSRBIG00000044644	SMARCA5	98	93.786	Rhinopithecus_bieti
ENSSPUG00000007604	SMARCA5	100	95.988	ENSRROG00000029591	SMARCA5	100	95.988	Rhinopithecus_roxellana
ENSSPUG00000007604	SMARCA5	99	96.281	ENSSBOG00000036257	SMARCA5	97	94.526	Saimiri_boliviensis_boliviensis
ENSSPUG00000007604	SMARCA5	99	96.970	ENSSHAG00000008464	SMARCA5	99	96.970	Sarcophilus_harrisii
ENSSPUG00000007604	SMARCA5	99	89.362	ENSSFOG00015013252	SMARCA5	96	89.362	Scleropages_formosus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSSSCG00000009047	SMARCA5	97	95.088	Sus_scrofa
ENSSPUG00000007604	SMARCA5	100	95.683	ENSTGUG00000002408	SMARCA5	100	94.841	Taeniopygia_guttata
ENSSPUG00000007604	SMARCA5	97	97.704	ENSUAMG00000023495	SMARCA5	95	94.990	Ursus_americanus
ENSSPUG00000007604	SMARCA5	99	96.583	ENSUMAG00000015324	SMARCA5	96	96.768	Ursus_maritimus
ENSSPUG00000007604	SMARCA5	99	96.482	ENSVPAG00000008982	SMARCA5	99	92.550	Vicugna_pacos
ENSSPUG00000007604	SMARCA5	99	96.583	ENSVVUG00000017473	SMARCA5	97	94.990	Vulpes_vulpes
ENSSPUG00000007604	SMARCA5	97	93.401	ENSXETG00000017566	smarca5	95	92.585	Xenopus_tropicalis