EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000007719 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 186525 bases
Position: chrQEPC01007559.1:13855803-14042327
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000009974	R3H	PF01424.22	5.5e-06	1	1
ENSSPUP00000009974	RNA_bind	PF08675.11	1.6e-33	1	1
ENSSPUP00000009974	CAF1	PF04857.20	3.9e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000010629	PARN-201	2829	-	ENSSPUP00000009974	638 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000007719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000007719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000007719	PARN	100	85.133	ENSG00000140694	PARN	100	89.831	Homo_sapiens
ENSSPUG00000007719	PARN	100	83.725	ENSAMEG00000011208	PARN	100	83.725	Ailuropoda_melanoleuca
ENSSPUG00000007719	PARN	87	73.843	ENSACIG00000000619	parn	87	73.843	Amphilophus_citrinellus
ENSSPUG00000007719	PARN	91	72.542	ENSAOCG00000003465	parn	83	72.542	Amphiprion_ocellaris
ENSSPUG00000007719	PARN	74	78.013	ENSAPEG00000010661	parn	91	78.013	Amphiprion_percula
ENSSPUG00000007719	PARN	92	74.411	ENSATEG00000004661	parn	84	74.411	Anabas_testudineus
ENSSPUG00000007719	PARN	99	89.557	ENSAPLG00000013914	PARN	99	89.557	Anas_platyrhynchos
ENSSPUG00000007719	PARN	100	81.106	ENSACAG00000004973	PARN	100	81.040	Anolis_carolinensis
ENSSPUG00000007719	PARN	100	84.351	ENSANAG00000031516	PARN	100	89.831	Aotus_nancymaae
ENSSPUG00000007719	PARN	91	75.000	ENSACLG00000004742	parn	84	75.000	Astatotilapia_calliptera
ENSSPUG00000007719	PARN	91	74.227	ENSAMXG00000012390	parn	94	73.196	Astyanax_mexicanus
ENSSPUG00000007719	PARN	100	81.505	ENSBTAG00000018097	PARN	100	84.055	Bos_taurus
ENSSPUG00000007719	PARN	100	85.133	ENSCJAG00000015866	PARN	100	89.831	Callithrix_jacchus
ENSSPUG00000007719	PARN	100	83.699	ENSCAFG00000018795	PARN	100	83.699	Canis_familiaris
ENSSPUG00000007719	PARN	55	30.252	ENSCAFG00020017742	PNLDC1	64	31.429	Canis_lupus_dingo
ENSSPUG00000007719	PARN	100	83.699	ENSCAFG00020024126	PARN	100	83.699	Canis_lupus_dingo
ENSSPUG00000007719	PARN	100	84.326	ENSCHIG00000018143	PARN	100	84.326	Capra_hircus
ENSSPUG00000007719	PARN	73	59.213	ENSCAPG00000007984	PARN	78	59.213	Cavia_aperea
ENSSPUG00000007719	PARN	100	83.229	ENSCPOG00000002263	PARN	100	83.229	Cavia_porcellus
ENSSPUG00000007719	PARN	100	84.977	ENSCCAG00000030367	PARN	100	89.831	Cebus_capucinus
ENSSPUG00000007719	PARN	90	91.278	ENSCATG00000041368	PARN	100	91.954	Cercocebus_atys
ENSSPUG00000007719	PARN	52	37.931	ENSCATG00000033196	PNLDC1	70	37.931	Cercocebus_atys
ENSSPUG00000007719	PARN	100	83.699	ENSCLAG00000015406	PARN	99	83.699	Chinchilla_lanigera
ENSSPUG00000007719	PARN	100	85.133	ENSCSAG00000008142	PARN	100	85.133	Chlorocebus_sabaeus
ENSSPUG00000007719	PARN	99	68.621	ENSCHOG00000007014	PARN	100	68.621	Choloepus_hoffmanni
ENSSPUG00000007719	PARN	88	91.622	ENSCPBG00000006609	PARN	97	91.636	Chrysemys_picta_bellii
ENSSPUG00000007719	PARN	80	43.233	ENSCING00000010142	-	99	43.233	Ciona_intestinalis
ENSSPUG00000007719	PARN	100	74.462	ENSCANG00000028849	-	100	89.831	Colobus_angolensis_palliatus
ENSSPUG00000007719	PARN	100	79.563	ENSCGRG00001012096	Parn	100	79.563	Cricetulus_griseus_chok1gshd
ENSSPUG00000007719	PARN	100	79.563	ENSCGRG00000004939	Parn	100	79.563	Cricetulus_griseus_crigri
ENSSPUG00000007719	PARN	91	72.337	ENSCSEG00000002064	parn	100	66.063	Cynoglossus_semilaevis
ENSSPUG00000007719	PARN	92	72.101	ENSCVAG00000014848	parn	83	72.101	Cyprinodon_variegatus
ENSSPUG00000007719	PARN	100	63.885	ENSDARG00000102634	parn	100	63.429	Danio_rerio
ENSSPUG00000007719	PARN	100	85.423	ENSDNOG00000000833	PARN	98	89.209	Dasypus_novemcinctus
ENSSPUG00000007719	PARN	74	85.878	ENSETEG00000014828	-	69	85.878	Echinops_telfairi
ENSSPUG00000007719	PARN	55	51.831	ENSEBUG00000007052	PARN	70	71.111	Eptatretus_burgeri
ENSSPUG00000007719	PARN	100	84.013	ENSEASG00005011400	PARN	100	84.013	Equus_asinus_asinus
ENSSPUG00000007719	PARN	100	83.699	ENSECAG00000017792	PARN	100	83.699	Equus_caballus
ENSSPUG00000007719	PARN	86	76.018	ENSEEUG00000010370	PARN	86	76.018	Erinaceus_europaeus
ENSSPUG00000007719	PARN	90	74.093	ENSELUG00000013139	parn	75	74.093	Esox_lucius
ENSSPUG00000007719	PARN	100	84.639	ENSFCAG00000044961	PARN	100	88.136	Felis_catus
ENSSPUG00000007719	PARN	99	89.540	ENSFALG00000003911	PARN	98	89.540	Ficedula_albicollis
ENSSPUG00000007719	PARN	100	82.915	ENSFDAG00000009234	PARN	100	82.915	Fukomys_damarensis
ENSSPUG00000007719	PARN	92	66.779	ENSFHEG00000013738	parn	92	81.356	Fundulus_heteroclitus
ENSSPUG00000007719	PARN	84	76.779	ENSGMOG00000003231	parn	97	76.779	Gadus_morhua
ENSSPUG00000007719	PARN	100	87.461	ENSGALG00000003091	PARN	100	87.461	Gallus_gallus
ENSSPUG00000007719	PARN	90	72.680	ENSGAFG00000011061	parn	84	72.128	Gambusia_affinis
ENSSPUG00000007719	PARN	100	67.852	ENSGACG00000019501	parn	100	67.852	Gasterosteus_aculeatus
ENSSPUG00000007719	PARN	55	83.286	ENSGAGG00000023281	PARN	90	84.419	Gopherus_agassizii
ENSSPUG00000007719	PARN	97	85.968	ENSGGOG00000025224	PARN	99	89.831	Gorilla_gorilla
ENSSPUG00000007719	PARN	91	75.000	ENSHBUG00000017906	parn	94	74.336	Haplochromis_burtoni
ENSSPUG00000007719	PARN	100	82.915	ENSHGLG00000010886	PARN	100	82.915	Heterocephalus_glaber_female
ENSSPUG00000007719	PARN	100	82.915	ENSHGLG00100014659	PARN	100	82.915	Heterocephalus_glaber_male
ENSSPUG00000007719	PARN	87	71.201	ENSHCOG00000008683	parn	97	71.201	Hippocampus_comes
ENSSPUG00000007719	PARN	100	56.185	ENSIPUG00000012401	parn	85	62.264	Ictalurus_punctatus
ENSSPUG00000007719	PARN	100	82.915	ENSSTOG00000007519	PARN	100	82.915	Ictidomys_tridecemlineatus
ENSSPUG00000007719	PARN	100	80.094	ENSJJAG00000023049	Parn	100	80.094	Jaculus_jaculus
ENSSPUG00000007719	PARN	91	73.333	ENSKMAG00000009462	parn	83	73.333	Kryptolebias_marmoratus
ENSSPUG00000007719	PARN	92	72.222	ENSLBEG00000009167	parn	90	72.222	Labrus_bergylta
ENSSPUG00000007719	PARN	79	80.159	ENSLACG00000004207	PARN	100	79.009	Latimeria_chalumnae
ENSSPUG00000007719	PARN	100	78.462	ENSLOCG00000000715	parn	94	78.462	Lepisosteus_oculatus
ENSSPUG00000007719	PARN	100	84.639	ENSLAFG00000015036	PARN	100	84.639	Loxodonta_africana
ENSSPUG00000007719	PARN	53	30.548	ENSLAFG00000030189	PNLDC1	89	31.138	Loxodonta_africana
ENSSPUG00000007719	PARN	100	80.625	ENSMFAG00000044852	PARN	100	89.831	Macaca_fascicularis
ENSSPUG00000007719	PARN	100	85.133	ENSMMUG00000018849	PARN	100	89.831	Macaca_mulatta
ENSSPUG00000007719	PARN	100	85.133	ENSMNEG00000045108	PARN	100	89.831	Macaca_nemestrina
ENSSPUG00000007719	PARN	100	85.290	ENSMLEG00000031743	PARN	100	89.831	Mandrillus_leucophaeus
ENSSPUG00000007719	PARN	91	72.987	ENSMAMG00000006939	parn	84	72.987	Mastacembelus_armatus
ENSSPUG00000007719	PARN	91	75.000	ENSMZEG00005013590	parn	95	73.860	Maylandia_zebra
ENSSPUG00000007719	PARN	96	87.134	ENSMGAG00000001004	PARN	96	87.134	Meleagris_gallopavo
ENSSPUG00000007719	PARN	100	74.268	ENSMAUG00000008025	Parn	100	74.268	Mesocricetus_auratus
ENSSPUG00000007719	PARN	100	85.737	ENSMICG00000016053	PARN	100	88.136	Microcebus_murinus
ENSSPUG00000007719	PARN	77	87.449	ENSMOCG00000022211	Parn	100	87.449	Microtus_ochrogaster
ENSSPUG00000007719	PARN	100	65.888	ENSMMOG00000011333	parn	87	75.514	Mola_mola
ENSSPUG00000007719	PARN	77	92.137	ENSMODG00000004915	PARN	99	92.137	Monodelphis_domestica
ENSSPUG00000007719	PARN	87	75.936	ENSMALG00000019426	parn	95	75.936	Monopterus_albus
ENSSPUG00000007719	PARN	100	79.624	MGP_CAROLIEiJ_G0020466	Parn	100	79.624	Mus_caroli
ENSSPUG00000007719	PARN	51	30.514	ENSMUSG00000073460	Pnldc1	66	37.226	Mus_musculus
ENSSPUG00000007719	PARN	100	79.624	ENSMUSG00000022685	Parn	100	84.146	Mus_musculus
ENSSPUG00000007719	PARN	100	79.310	MGP_PahariEiJ_G0016172	Parn	100	79.310	Mus_pahari
ENSSPUG00000007719	PARN	100	79.624	MGP_SPRETEiJ_G0021361	Parn	100	79.624	Mus_spretus
ENSSPUG00000007719	PARN	100	84.326	ENSMPUG00000014464	PARN	100	84.326	Mustela_putorius_furo
ENSSPUG00000007719	PARN	77	89.271	ENSMLUG00000005414	PARN	100	89.271	Myotis_lucifugus
ENSSPUG00000007719	PARN	83	76.723	ENSNBRG00000006805	parn	90	76.723	Neolamprologus_brichardi
ENSSPUG00000007719	PARN	100	84.820	ENSNLEG00000010241	PARN	100	89.831	Nomascus_leucogenys
ENSSPUG00000007719	PARN	99	61.331	ENSMEUG00000008178	-	100	61.331	Notamacropus_eugenii
ENSSPUG00000007719	PARN	99	78.764	ENSOPRG00000012187	PARN	100	78.764	Ochotona_princeps
ENSSPUG00000007719	PARN	100	76.443	ENSODEG00000001617	PARN	100	76.443	Octodon_degus
ENSSPUG00000007719	PARN	91	75.171	ENSONIG00000000151	parn	83	78.850	Oreochromis_niloticus
ENSSPUG00000007719	PARN	59	83.820	ENSOANG00000020155	-	97	84.127	Ornithorhynchus_anatinus
ENSSPUG00000007719	PARN	99	83.465	ENSOCUG00000000322	PARN	99	83.861	Oryctolagus_cuniculus
ENSSPUG00000007719	PARN	95	70.000	ENSORLG00020010313	parn	87	70.805	Oryzias_latipes_hni
ENSSPUG00000007719	PARN	95	69.672	ENSORLG00015000300	parn	87	70.805	Oryzias_latipes_hsok
ENSSPUG00000007719	PARN	95	69.821	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSSPUG00000007719	PARN	77	88.081	ENSOGAG00000014626	PARN	100	88.081	Otolemur_garnettii
ENSSPUG00000007719	PARN	77	90.688	ENSOARG00000007574	PARN	100	90.688	Ovis_aries
ENSSPUG00000007719	PARN	100	85.133	ENSPPAG00000031438	PARN	100	89.831	Pan_paniscus
ENSSPUG00000007719	PARN	100	84.483	ENSPPRG00000018583	PARN	100	88.136	Panthera_pardus
ENSSPUG00000007719	PARN	100	84.483	ENSPTIG00000012135	PARN	100	88.136	Panthera_tigris_altaica
ENSSPUG00000007719	PARN	100	84.820	ENSPTRG00000007792	PARN	100	89.831	Pan_troglodytes
ENSSPUG00000007719	PARN	100	82.160	ENSPANG00000020099	PARN	100	89.831	Papio_anubis
ENSSPUG00000007719	PARN	91	75.000	ENSPKIG00000022807	parn	91	69.882	Paramormyrops_kingsleyae
ENSSPUG00000007719	PARN	97	89.068	ENSPSIG00000014804	PARN	100	88.562	Pelodiscus_sinensis
ENSSPUG00000007719	PARN	80	76.070	ENSPMGG00000014431	parn	79	71.454	Periophthalmus_magnuspinnatus
ENSSPUG00000007719	PARN	100	77.586	ENSPEMG00000018439	Parn	100	77.586	Peromyscus_maniculatus_bairdii
ENSSPUG00000007719	PARN	81	67.115	ENSPMAG00000003956	parn	99	67.115	Petromyzon_marinus
ENSSPUG00000007719	PARN	66	84.634	ENSPCIG00000001259	PARN	91	86.441	Phascolarctos_cinereus
ENSSPUG00000007719	PARN	90	73.103	ENSPFOG00000012823	parn	84	72.542	Poecilia_formosa
ENSSPUG00000007719	PARN	90	73.276	ENSPLAG00000006395	parn	84	72.712	Poecilia_latipinna
ENSSPUG00000007719	PARN	90	73.276	ENSPMEG00000007711	parn	84	72.758	Poecilia_mexicana
ENSSPUG00000007719	PARN	90	72.931	ENSPREG00000000147	parn	84	72.420	Poecilia_reticulata
ENSSPUG00000007719	PARN	100	84.399	ENSPPYG00000007123	PARN	100	84.399	Pongo_abelii
ENSSPUG00000007719	PARN	95	74.711	ENSPCAG00000001741	PARN	100	74.711	Procavia_capensis
ENSSPUG00000007719	PARN	100	83.699	ENSPCOG00000019292	PARN	100	88.136	Propithecus_coquereli
ENSSPUG00000007719	PARN	99	80.983	ENSPVAG00000002547	PARN	100	80.983	Pteropus_vampyrus
ENSSPUG00000007719	PARN	91	75.000	ENSPNYG00000006835	parn	95	70.928	Pundamilia_nyererei
ENSSPUG00000007719	PARN	84	73.358	ENSPNAG00000018905	parn	85	73.358	Pygocentrus_nattereri
ENSSPUG00000007719	PARN	100	78.049	ENSRNOG00000002912	Parn	98	82.828	Rattus_norvegicus
ENSSPUG00000007719	PARN	52	81.081	ENSRBIG00000018726	PARN	100	81.081	Rhinopithecus_bieti
ENSSPUG00000007719	PARN	52	81.081	ENSRROG00000011162	-	100	81.081	Rhinopithecus_roxellana
ENSSPUG00000007719	PARN	100	83.255	ENSSBOG00000034726	PARN	100	89.831	Saimiri_boliviensis_boliviensis
ENSSPUG00000007719	PARN	65	91.607	ENSSHAG00000008493	PARN	93	91.607	Sarcophilus_harrisii
ENSSPUG00000007719	PARN	62	30.266	ENSSHAG00000015192	PNLDC1	65	30.097	Sarcophilus_harrisii
ENSSPUG00000007719	PARN	90	76.736	ENSSFOG00015014165	parn	92	75.304	Scleropages_formosus
ENSSPUG00000007719	PARN	92	70.707	ENSSMAG00000000685	parn	92	68.706	Scophthalmus_maximus
ENSSPUG00000007719	PARN	92	72.483	ENSSDUG00000014555	parn	84	73.390	Seriola_dumerili
ENSSPUG00000007719	PARN	91	73.402	ENSSARG00000014339	PARN	100	73.402	Sorex_araneus
ENSSPUG00000007719	PARN	100	65.576	ENSSPAG00000007095	parn	90	71.836	Stegastes_partitus
ENSSPUG00000007719	PARN	100	84.013	ENSSSCG00000007878	PARN	89	84.013	Sus_scrofa
ENSSPUG00000007719	PARN	55	30.919	ENSTGUG00000011418	PNLDC1	68	30.084	Taeniopygia_guttata
ENSSPUG00000007719	PARN	99	89.557	ENSTGUG00000004971	PARN	99	89.557	Taeniopygia_guttata
ENSSPUG00000007719	PARN	100	68.731	ENSTNIG00000008252	parn	100	68.885	Tetraodon_nigroviridis
ENSSPUG00000007719	PARN	91	72.021	ENSTBEG00000010407	PARN	100	72.021	Tupaia_belangeri
ENSSPUG00000007719	PARN	99	79.556	ENSTTRG00000002843	PARN	100	79.556	Tursiops_truncatus
ENSSPUG00000007719	PARN	68	78.670	ENSUAMG00000008283	PARN	90	78.670	Ursus_americanus
ENSSPUG00000007719	PARN	100	84.326	ENSUMAG00000004527	PARN	100	84.326	Ursus_maritimus
ENSSPUG00000007719	PARN	94	83.445	ENSVPAG00000008968	PARN	97	83.585	Vicugna_pacos
ENSSPUG00000007719	PARN	100	84.169	ENSVVUG00000019509	PARN	100	84.169	Vulpes_vulpes
ENSSPUG00000007719	PARN	100	77.812	ENSXETG00000010994	parn	99	84.762	Xenopus_tropicalis
ENSSPUG00000007719	PARN	90	68.330	ENSXCOG00000015990	parn	96	68.020	Xiphophorus_couchianus
ENSSPUG00000007719	PARN	92	71.886	ENSXMAG00000014783	parn	84	71.886	Xiphophorus_maculatus