EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000008232 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 76871 bases
Position: chrQEPC01015075.1:1111762-1188632
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000010685	FDF	PF09532.10	6.4e-17	1	1
ENSSPUP00000010685	LSM14	PF12701.7	7.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011401	EDC3-201	2527	-	ENSSPUP00000010685	508 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008232	EDC3	100	88.386	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSSPUG00000008232	EDC3	100	69.155	ENSAPOG00000010791	edc3	100	69.155	Acanthochromis_polyacanthus
ENSSPUG00000008232	EDC3	99	55.361	ENSAPOG00000008655	EDC3	99	55.361	Acanthochromis_polyacanthus
ENSSPUG00000008232	EDC3	100	87.795	ENSAMEG00000008963	EDC3	100	87.795	Ailuropoda_melanoleuca
ENSSPUG00000008232	EDC3	99	58.869	ENSACIG00000005330	EDC3	99	58.869	Amphilophus_citrinellus
ENSSPUG00000008232	EDC3	100	67.976	ENSACIG00000017751	edc3	100	67.976	Amphilophus_citrinellus
ENSSPUG00000008232	EDC3	99	58.480	ENSAOCG00000009103	-	99	58.480	Amphiprion_ocellaris
ENSSPUG00000008232	EDC3	100	69.155	ENSAOCG00000005431	edc3	100	69.155	Amphiprion_ocellaris
ENSSPUG00000008232	EDC3	99	57.505	ENSAPEG00000007841	EDC3	99	58.285	Amphiprion_percula
ENSSPUG00000008232	EDC3	100	69.155	ENSAPEG00000000968	edc3	100	69.155	Amphiprion_percula
ENSSPUG00000008232	EDC3	100	68.566	ENSATEG00000015505	edc3	100	68.566	Anabas_testudineus
ENSSPUG00000008232	EDC3	100	58.269	ENSATEG00000004205	-	100	58.269	Anabas_testudineus
ENSSPUG00000008232	EDC3	90	91.429	ENSAPLG00000008957	EDC3	100	91.429	Anas_platyrhynchos
ENSSPUG00000008232	EDC3	78	88.665	ENSACAG00000000460	-	100	88.665	Anolis_carolinensis
ENSSPUG00000008232	EDC3	100	88.583	ENSANAG00000024078	EDC3	100	88.583	Aotus_nancymaae
ENSSPUG00000008232	EDC3	99	58.789	ENSACLG00000018776	-	99	58.789	Astatotilapia_calliptera
ENSSPUG00000008232	EDC3	100	67.191	ENSACLG00000007232	edc3	100	67.191	Astatotilapia_calliptera
ENSSPUG00000008232	EDC3	100	69.455	ENSAMXG00000001589	edc3	100	69.455	Astyanax_mexicanus
ENSSPUG00000008232	EDC3	100	88.189	ENSBTAG00000007308	EDC3	100	88.189	Bos_taurus
ENSSPUG00000008232	EDC3	100	88.583	ENSCJAG00000017681	EDC3	100	88.583	Callithrix_jacchus
ENSSPUG00000008232	EDC3	100	87.992	ENSCAFG00000017935	EDC3	100	87.992	Canis_familiaris
ENSSPUG00000008232	EDC3	100	87.992	ENSCAFG00020003909	EDC3	100	87.992	Canis_lupus_dingo
ENSSPUG00000008232	EDC3	100	88.583	ENSCHIG00000023658	EDC3	100	88.583	Capra_hircus
ENSSPUG00000008232	EDC3	100	87.992	ENSTSYG00000004822	EDC3	100	87.992	Carlito_syrichta
ENSSPUG00000008232	EDC3	100	87.205	ENSCPOG00000015595	EDC3	100	87.205	Cavia_porcellus
ENSSPUG00000008232	EDC3	100	88.780	ENSCCAG00000021663	EDC3	100	88.780	Cebus_capucinus
ENSSPUG00000008232	EDC3	100	88.976	ENSCATG00000037511	EDC3	100	88.976	Cercocebus_atys
ENSSPUG00000008232	EDC3	100	86.811	ENSCLAG00000005700	EDC3	100	86.811	Chinchilla_lanigera
ENSSPUG00000008232	EDC3	100	88.976	ENSCSAG00000014239	EDC3	100	88.976	Chlorocebus_sabaeus
ENSSPUG00000008232	EDC3	100	93.504	ENSCPBG00000024239	EDC3	100	93.504	Chrysemys_picta_bellii
ENSSPUG00000008232	EDC3	100	37.958	ENSCING00000022142	-	99	37.958	Ciona_intestinalis
ENSSPUG00000008232	EDC3	100	88.976	ENSCANG00000028699	EDC3	100	88.976	Colobus_angolensis_palliatus
ENSSPUG00000008232	EDC3	100	89.370	ENSCGRG00001013874	Edc3	100	89.370	Cricetulus_griseus_chok1gshd
ENSSPUG00000008232	EDC3	100	89.370	ENSCGRG00000011885	Edc3	100	89.370	Cricetulus_griseus_crigri
ENSSPUG00000008232	EDC3	99	69.882	ENSCSEG00000012996	edc3	99	69.882	Cynoglossus_semilaevis
ENSSPUG00000008232	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSSPUG00000008232	EDC3	99	68.359	ENSDARG00000051931	edc3	99	68.359	Danio_rerio
ENSSPUG00000008232	EDC3	100	77.713	ENSDNOG00000030661	EDC3	100	77.713	Dasypus_novemcinctus
ENSSPUG00000008232	EDC3	64	96.296	ENSETEG00000002398	-	64	96.296	Echinops_telfairi
ENSSPUG00000008232	EDC3	100	88.583	ENSEASG00005005071	EDC3	100	88.583	Equus_asinus_asinus
ENSSPUG00000008232	EDC3	100	88.583	ENSECAG00000017994	EDC3	100	88.583	Equus_caballus
ENSSPUG00000008232	EDC3	100	64.912	ENSELUG00000005794	edc3	100	64.912	Esox_lucius
ENSSPUG00000008232	EDC3	100	62.035	ENSELUG00000007607	EDC3	100	62.035	Esox_lucius
ENSSPUG00000008232	EDC3	100	87.205	ENSFCAG00000002014	EDC3	100	87.205	Felis_catus
ENSSPUG00000008232	EDC3	98	88.577	ENSFALG00000004543	EDC3	96	88.577	Ficedula_albicollis
ENSSPUG00000008232	EDC3	100	87.598	ENSFDAG00000012582	EDC3	100	87.598	Fukomys_damarensis
ENSSPUG00000008232	EDC3	100	68.173	ENSFHEG00000009375	edc3	100	68.173	Fundulus_heteroclitus
ENSSPUG00000008232	EDC3	100	67.383	ENSGMOG00000002715	edc3	100	67.383	Gadus_morhua
ENSSPUG00000008232	EDC3	100	93.110	ENSGALG00000040181	EDC3	100	93.110	Gallus_gallus
ENSSPUG00000008232	EDC3	100	66.994	ENSGAFG00000014433	edc3	100	66.994	Gambusia_affinis
ENSSPUG00000008232	EDC3	100	67.387	ENSGACG00000009783	edc3	100	67.387	Gasterosteus_aculeatus
ENSSPUG00000008232	EDC3	99	55.556	ENSGACG00000014671	EDC3	99	55.945	Gasterosteus_aculeatus
ENSSPUG00000008232	EDC3	100	93.307	ENSGAGG00000023477	EDC3	100	93.307	Gopherus_agassizii
ENSSPUG00000008232	EDC3	100	88.583	ENSGGOG00000003552	EDC3	100	88.583	Gorilla_gorilla
ENSSPUG00000008232	EDC3	100	67.191	ENSHBUG00000003635	edc3	100	67.191	Haplochromis_burtoni
ENSSPUG00000008232	EDC3	99	58.789	ENSHBUG00000020817	EDC3	99	58.789	Haplochromis_burtoni
ENSSPUG00000008232	EDC3	100	66.536	ENSHCOG00000016834	edc3	100	66.536	Hippocampus_comes
ENSSPUG00000008232	EDC3	99	68.616	ENSIPUG00000005695	edc3	100	68.616	Ictalurus_punctatus
ENSSPUG00000008232	EDC3	100	88.780	ENSSTOG00000013936	EDC3	100	88.780	Ictidomys_tridecemlineatus
ENSSPUG00000008232	EDC3	100	87.992	ENSJJAG00000008074	Edc3	100	87.992	Jaculus_jaculus
ENSSPUG00000008232	EDC3	99	55.731	ENSKMAG00000001987	EDC3	99	55.731	Kryptolebias_marmoratus
ENSSPUG00000008232	EDC3	100	67.976	ENSKMAG00000001243	edc3	100	68.102	Kryptolebias_marmoratus
ENSSPUG00000008232	EDC3	100	68.039	ENSLBEG00000013435	edc3	99	68.431	Labrus_bergylta
ENSSPUG00000008232	EDC3	100	57.864	ENSLBEG00000017984	EDC3	100	57.471	Labrus_bergylta
ENSSPUG00000008232	EDC3	100	78.058	ENSLACG00000014149	EDC3	100	78.058	Latimeria_chalumnae
ENSSPUG00000008232	EDC3	100	67.057	ENSLOCG00000014625	edc3	100	67.315	Lepisosteus_oculatus
ENSSPUG00000008232	EDC3	100	87.992	ENSLAFG00000002992	EDC3	100	87.992	Loxodonta_africana
ENSSPUG00000008232	EDC3	100	88.780	ENSMFAG00000043074	EDC3	100	88.780	Macaca_fascicularis
ENSSPUG00000008232	EDC3	100	88.780	ENSMMUG00000011071	EDC3	100	88.780	Macaca_mulatta
ENSSPUG00000008232	EDC3	100	88.780	ENSMNEG00000035316	EDC3	100	88.780	Macaca_nemestrina
ENSSPUG00000008232	EDC3	100	88.976	ENSMLEG00000030372	EDC3	100	88.976	Mandrillus_leucophaeus
ENSSPUG00000008232	EDC3	100	56.809	ENSMAMG00000005423	-	100	56.809	Mastacembelus_armatus
ENSSPUG00000008232	EDC3	100	68.369	ENSMAMG00000000505	edc3	100	68.369	Mastacembelus_armatus
ENSSPUG00000008232	EDC3	100	67.191	ENSMZEG00005004892	edc3	100	67.191	Maylandia_zebra
ENSSPUG00000008232	EDC3	99	58.984	ENSMZEG00005005654	EDC3	99	58.984	Maylandia_zebra
ENSSPUG00000008232	EDC3	100	92.323	ENSMGAG00000002617	EDC3	100	92.323	Meleagris_gallopavo
ENSSPUG00000008232	EDC3	100	88.583	ENSMICG00000043190	EDC3	100	88.583	Microcebus_murinus
ENSSPUG00000008232	EDC3	100	88.976	ENSMOCG00000016205	Edc3	100	88.976	Microtus_ochrogaster
ENSSPUG00000008232	EDC3	99	68.504	ENSMMOG00000012278	edc3	99	68.701	Mola_mola
ENSSPUG00000008232	EDC3	100	90.551	ENSMODG00000009442	EDC3	100	90.551	Monodelphis_domestica
ENSSPUG00000008232	EDC3	100	69.155	ENSMALG00000008658	edc3	100	69.155	Monopterus_albus
ENSSPUG00000008232	EDC3	100	88.583	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSSPUG00000008232	EDC3	100	88.583	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSSPUG00000008232	EDC3	100	88.780	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSSPUG00000008232	EDC3	100	88.780	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSSPUG00000008232	EDC3	100	88.189	ENSMPUG00000017293	EDC3	100	88.189	Mustela_putorius_furo
ENSSPUG00000008232	EDC3	100	87.255	ENSMLUG00000016382	EDC3	100	87.255	Myotis_lucifugus
ENSSPUG00000008232	EDC3	100	88.189	ENSNGAG00000010923	Edc3	100	88.189	Nannospalax_galili
ENSSPUG00000008232	EDC3	99	59.144	ENSNBRG00000007881	EDC3	99	59.144	Neolamprologus_brichardi
ENSSPUG00000008232	EDC3	100	67.191	ENSNBRG00000002434	edc3	100	67.191	Neolamprologus_brichardi
ENSSPUG00000008232	EDC3	100	79.134	ENSNLEG00000014577	EDC3	100	79.134	Nomascus_leucogenys
ENSSPUG00000008232	EDC3	100	89.961	ENSMEUG00000009077	EDC3	100	89.961	Notamacropus_eugenii
ENSSPUG00000008232	EDC3	79	94.444	ENSOPRG00000009540	-	79	94.444	Ochotona_princeps
ENSSPUG00000008232	EDC3	100	67.387	ENSONIG00000008434	edc3	100	67.387	Oreochromis_niloticus
ENSSPUG00000008232	EDC3	99	59.454	ENSONIG00000002932	-	99	59.454	Oreochromis_niloticus
ENSSPUG00000008232	EDC3	78	85.642	ENSOCUG00000017740	EDC3	86	85.642	Oryctolagus_cuniculus
ENSSPUG00000008232	EDC3	99	56.471	ENSORLG00000014399	-	98	56.471	Oryzias_latipes
ENSSPUG00000008232	EDC3	100	66.994	ENSORLG00000004883	edc3	100	66.994	Oryzias_latipes
ENSSPUG00000008232	EDC3	99	56.471	ENSORLG00020019446	-	99	56.471	Oryzias_latipes_hni
ENSSPUG00000008232	EDC3	100	66.798	ENSORLG00020012262	edc3	100	66.798	Oryzias_latipes_hni
ENSSPUG00000008232	EDC3	100	66.994	ENSORLG00015005634	edc3	100	66.798	Oryzias_latipes_hsok
ENSSPUG00000008232	EDC3	99	56.275	ENSORLG00015017635	-	95	56.275	Oryzias_latipes_hsok
ENSSPUG00000008232	EDC3	99	56.863	ENSOMEG00000017354	EDC3	99	56.863	Oryzias_melastigma
ENSSPUG00000008232	EDC3	100	68.369	ENSOMEG00000014026	edc3	100	68.369	Oryzias_melastigma
ENSSPUG00000008232	EDC3	100	88.583	ENSOGAG00000014441	EDC3	100	88.583	Otolemur_garnettii
ENSSPUG00000008232	EDC3	100	87.819	ENSOARG00000003476	EDC3	100	88.212	Ovis_aries
ENSSPUG00000008232	EDC3	100	88.583	ENSPPAG00000040143	EDC3	100	88.583	Pan_paniscus
ENSSPUG00000008232	EDC3	100	87.598	ENSPPRG00000006257	EDC3	100	87.598	Panthera_pardus
ENSSPUG00000008232	EDC3	100	87.598	ENSPTIG00000017424	EDC3	100	87.598	Panthera_tigris_altaica
ENSSPUG00000008232	EDC3	100	88.583	ENSPTRG00000007279	EDC3	100	88.583	Pan_troglodytes
ENSSPUG00000008232	EDC3	100	88.976	ENSPANG00000015997	EDC3	100	88.976	Papio_anubis
ENSSPUG00000008232	EDC3	99	66.275	ENSPKIG00000019810	EDC3	99	66.275	Paramormyrops_kingsleyae
ENSSPUG00000008232	EDC3	100	67.383	ENSPKIG00000004416	edc3	100	68.359	Paramormyrops_kingsleyae
ENSSPUG00000008232	EDC3	100	86.417	ENSPSIG00000008474	EDC3	100	86.417	Pelodiscus_sinensis
ENSSPUG00000008232	EDC3	100	66.732	ENSPMGG00000007223	edc3	100	66.732	Periophthalmus_magnuspinnatus
ENSSPUG00000008232	EDC3	100	88.189	ENSPEMG00000015260	Edc3	100	88.189	Peromyscus_maniculatus_bairdii
ENSSPUG00000008232	EDC3	100	89.173	ENSPCIG00000006276	EDC3	70	89.173	Phascolarctos_cinereus
ENSSPUG00000008232	EDC3	100	68.173	ENSPFOG00000012204	edc3	100	68.173	Poecilia_formosa
ENSSPUG00000008232	EDC3	100	68.173	ENSPLAG00000014420	edc3	100	68.173	Poecilia_latipinna
ENSSPUG00000008232	EDC3	100	68.173	ENSPMEG00000023289	edc3	100	68.173	Poecilia_mexicana
ENSSPUG00000008232	EDC3	100	67.780	ENSPREG00000016022	edc3	100	67.780	Poecilia_reticulata
ENSSPUG00000008232	EDC3	100	87.598	ENSPPYG00000006642	EDC3	100	87.598	Pongo_abelii
ENSSPUG00000008232	EDC3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSSPUG00000008232	EDC3	100	88.583	ENSPCOG00000013364	EDC3	100	88.583	Propithecus_coquereli
ENSSPUG00000008232	EDC3	100	87.795	ENSPVAG00000014733	EDC3	100	87.795	Pteropus_vampyrus
ENSSPUG00000008232	EDC3	99	58.789	ENSPNYG00000009669	EDC3	99	58.789	Pundamilia_nyererei
ENSSPUG00000008232	EDC3	100	67.191	ENSPNYG00000021797	edc3	100	67.191	Pundamilia_nyererei
ENSSPUG00000008232	EDC3	100	68.593	ENSPNAG00000019657	edc3	100	68.593	Pygocentrus_nattereri
ENSSPUG00000008232	EDC3	99	88.713	ENSRNOG00000019579	Edc3	99	88.713	Rattus_norvegicus
ENSSPUG00000008232	EDC3	100	88.780	ENSRBIG00000019488	EDC3	100	88.780	Rhinopithecus_bieti
ENSSPUG00000008232	EDC3	100	88.780	ENSRROG00000034959	EDC3	100	88.780	Rhinopithecus_roxellana
ENSSPUG00000008232	EDC3	100	88.583	ENSSBOG00000004896	EDC3	100	88.583	Saimiri_boliviensis_boliviensis
ENSSPUG00000008232	EDC3	96	90.184	ENSSHAG00000015075	EDC3	95	90.184	Sarcophilus_harrisii
ENSSPUG00000008232	EDC3	99	70.117	ENSSFOG00015016939	edc3	99	70.703	Scleropages_formosus
ENSSPUG00000008232	EDC3	81	80.597	ENSSFOG00015002439	edc3	100	64.008	Scleropages_formosus
ENSSPUG00000008232	EDC3	100	68.762	ENSSMAG00000010695	edc3	100	69.155	Scophthalmus_maximus
ENSSPUG00000008232	EDC3	99	57.115	ENSSMAG00000010176	-	99	57.115	Scophthalmus_maximus
ENSSPUG00000008232	EDC3	100	68.762	ENSSDUG00000021844	edc3	100	69.155	Seriola_dumerili
ENSSPUG00000008232	EDC3	99	59.574	ENSSDUG00000007671	EDC3	99	59.574	Seriola_dumerili
ENSSPUG00000008232	EDC3	100	68.762	ENSSLDG00000022046	edc3	100	69.155	Seriola_lalandi_dorsalis
ENSSPUG00000008232	EDC3	81	88.306	ENSSARG00000003907	EDC3	80	88.306	Sorex_araneus
ENSSPUG00000008232	EDC3	99	57.617	ENSSPAG00000020327	EDC3	99	58.398	Stegastes_partitus
ENSSPUG00000008232	EDC3	100	68.959	ENSSPAG00000010009	edc3	100	68.959	Stegastes_partitus
ENSSPUG00000008232	EDC3	100	88.189	ENSSSCG00000001903	EDC3	100	88.189	Sus_scrofa
ENSSPUG00000008232	EDC3	100	92.126	ENSTGUG00000004007	EDC3	100	92.126	Taeniopygia_guttata
ENSSPUG00000008232	EDC3	100	69.548	ENSTRUG00000017078	edc3	100	69.548	Takifugu_rubripes
ENSSPUG00000008232	EDC3	100	68.493	ENSTNIG00000016047	edc3	100	68.493	Tetraodon_nigroviridis
ENSSPUG00000008232	EDC3	100	88.189	ENSTTRG00000007990	EDC3	100	88.189	Tursiops_truncatus
ENSSPUG00000008232	EDC3	100	87.795	ENSUAMG00000026710	-	100	87.795	Ursus_americanus
ENSSPUG00000008232	EDC3	100	87.795	ENSUMAG00000005006	EDC3	96	87.795	Ursus_maritimus
ENSSPUG00000008232	EDC3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSSPUG00000008232	EDC3	100	87.992	ENSVVUG00000018601	EDC3	100	87.992	Vulpes_vulpes
ENSSPUG00000008232	EDC3	68	81.609	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSSPUG00000008232	EDC3	100	68.173	ENSXMAG00000007377	edc3	100	68.173	Xiphophorus_maculatus