EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000008244 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 11111 bases
Position: chrQEPC01000146.1:328012-339122
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000010703	RRM_1	PF00076.22	2.1e-64	1	4
ENSSPUP00000010703	RRM_1	PF00076.22	2.1e-64	2	4
ENSSPUP00000010703	RRM_1	PF00076.22	2.1e-64	3	4
ENSSPUP00000010703	RRM_1	PF00076.22	2.1e-64	4	4
ENSSPUP00000010696	RRM_1	PF00076.22	3.1e-64	1	4
ENSSPUP00000010696	RRM_1	PF00076.22	3.1e-64	2	4
ENSSPUP00000010696	RRM_1	PF00076.22	3.1e-64	3	4
ENSSPUP00000010696	RRM_1	PF00076.22	3.1e-64	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011419	-	2355	-	ENSSPUP00000010703	648 (aa)	-	-
ENSSPUT00000011412	-	2493	-	ENSSPUP00000010696	694 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000008244	-	50	30.556	ENSSPUG00000018259	-	69	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008244	-	67	37.333	ENSAPOG00000014534	-	67	38.177	Acanthochromis_polyacanthus
ENSSPUG00000008244	-	60	60.358	ENSAPOG00000023888	ncl	62	57.399	Acanthochromis_polyacanthus
ENSSPUG00000008244	-	60	58.505	ENSACIG00000013234	ncl	62	58.612	Amphilophus_citrinellus
ENSSPUG00000008244	-	75	33.716	ENSAOCG00000014792	-	61	36.725	Amphiprion_ocellaris
ENSSPUG00000008244	-	56	60.459	ENSAOCG00000003133	ncl	60	57.675	Amphiprion_ocellaris
ENSSPUG00000008244	-	56	60.459	ENSAPEG00000002769	ncl	52	60.560	Amphiprion_percula
ENSSPUG00000008244	-	75	33.716	ENSAPEG00000013612	-	61	36.725	Amphiprion_percula
ENSSPUG00000008244	-	60	61.224	ENSATEG00000013343	ncl	53	61.323	Anabas_testudineus
ENSSPUG00000008244	-	68	40.592	ENSATEG00000019862	-	80	41.505	Anabas_testudineus
ENSSPUG00000008244	-	61	72.750	ENSAPLG00000012897	-	75	65.532	Anas_platyrhynchos
ENSSPUG00000008244	-	85	62.704	ENSACAG00000001006	-	74	63.718	Anolis_carolinensis
ENSSPUG00000008244	-	60	60.938	ENSACLG00000026031	ncl	83	61.059	Astatotilapia_calliptera
ENSSPUG00000008244	-	60	57.584	ENSAMXG00000001647	ncl	81	59.561	Astyanax_mexicanus
ENSSPUG00000008244	-	55	46.448	ENSCHIG00000012665	-	54	47.264	Capra_hircus
ENSSPUG00000008244	-	54	52.222	ENSCHIG00000003401	-	50	56.540	Capra_hircus
ENSSPUG00000008244	-	91	68.621	ENSCPBG00000016444	-	90	69.097	Chrysemys_picta_bellii
ENSSPUG00000008244	-	63	56.800	ENSCSEG00000015089	ncl	72	49.444	Cynoglossus_semilaevis
ENSSPUG00000008244	-	60	59.241	ENSCVAG00000012600	ncl	72	51.782	Cyprinodon_variegatus
ENSSPUG00000008244	-	59	61.165	ENSDARG00000002710	ncl	98	61.772	Danio_rerio
ENSSPUG00000008244	-	79	47.389	ENSDNOG00000031611	-	79	48.899	Dasypus_novemcinctus
ENSSPUG00000008244	-	66	48.802	ENSDNOG00000040257	-	65	49.500	Dasypus_novemcinctus
ENSSPUG00000008244	-	67	43.764	ENSELUG00000022826	-	81	46.482	Esox_lucius
ENSSPUG00000008244	-	58	58.594	ENSELUG00000006033	ncl	56	58.718	Esox_lucius
ENSSPUG00000008244	-	57	70.677	ENSFALG00000007592	-	91	62.597	Ficedula_albicollis
ENSSPUG00000008244	-	61	58.458	ENSFHEG00000018000	ncl	85	57.816	Fundulus_heteroclitus
ENSSPUG00000008244	-	62	55.941	ENSGMOG00000001341	ncl	73	50.214	Gadus_morhua
ENSSPUG00000008244	-	59	59.640	ENSGAFG00000015375	ncl	62	54.400	Gambusia_affinis
ENSSPUG00000008244	-	60	59.103	ENSGACG00000008970	ncl	63	57.500	Gasterosteus_aculeatus
ENSSPUG00000008244	-	91	68.038	ENSGAGG00000013330	-	90	68.088	Gopherus_agassizii
ENSSPUG00000008244	-	54	60.733	ENSHBUG00000006869	ncl	53	60.513	Haplochromis_burtoni
ENSSPUG00000008244	-	54	62.730	ENSHCOG00000010234	ncl	72	53.959	Hippocampus_comes
ENSSPUG00000008244	-	58	58.115	ENSKMAG00000008111	ncl	54	58.543	Kryptolebias_marmoratus
ENSSPUG00000008244	-	58	58.747	ENSLBEG00000019073	ncl	55	57.949	Labrus_bergylta
ENSSPUG00000008244	-	63	39.529	ENSLBEG00000014278	-	88	39.416	Labrus_bergylta
ENSSPUG00000008244	-	67	38.987	ENSLBEG00000007915	-	71	38.864	Labrus_bergylta
ENSSPUG00000008244	-	76	50.605	ENSLACG00000022167	-	80	51.134	Latimeria_chalumnae
ENSSPUG00000008244	-	61	61.845	ENSLACG00000009328	ncl	58	60.880	Latimeria_chalumnae
ENSSPUG00000008244	-	57	59.626	ENSLOCG00000004828	ncl	51	58.987	Lepisosteus_oculatus
ENSSPUG00000008244	-	64	35.566	ENSMAMG00000003479	-	68	35.443	Mastacembelus_armatus
ENSSPUG00000008244	-	59	60.513	ENSMAMG00000002086	ncl	56	52.510	Mastacembelus_armatus
ENSSPUG00000008244	-	54	60.471	ENSMZEG00005017438	ncl	53	60.256	Maylandia_zebra
ENSSPUG00000008244	-	58	73.107	ENSMGAG00000008147	-	100	72.667	Meleagris_gallopavo
ENSSPUG00000008244	-	89	55.976	ENSMODG00000002470	-	64	62.208	Monodelphis_domestica
ENSSPUG00000008244	-	63	55.190	ENSMALG00000014827	ncl	55	58.152	Monopterus_albus
ENSSPUG00000008244	-	56	47.826	ENSMPUG00000001663	-	57	47.205	Mustela_putorius_furo
ENSSPUG00000008244	-	90	53.823	ENSMEUG00000012335	-	63	62.939	Notamacropus_eugenii
ENSSPUG00000008244	-	59	35.714	ENSONIG00000010631	-	95	35.825	Oreochromis_niloticus
ENSSPUG00000008244	-	62	59.024	ENSONIG00000012508	ncl	60	57.298	Oreochromis_niloticus
ENSSPUG00000008244	-	84	64.482	ENSOANG00000008732	-	84	63.561	Ornithorhynchus_anatinus
ENSSPUG00000008244	-	55	61.157	ENSORLG00000007055	ncl	51	60.154	Oryzias_latipes
ENSSPUG00000008244	-	61	31.144	ENSORLG00000004645	-	81	32.653	Oryzias_latipes
ENSSPUG00000008244	-	55	60.882	ENSORLG00020017943	ncl	51	59.897	Oryzias_latipes_hni
ENSSPUG00000008244	-	69	30.388	ENSORLG00020003497	-	73	32.908	Oryzias_latipes_hni
ENSSPUG00000008244	-	62	32.850	ENSORLG00015006613	-	76	33.673	Oryzias_latipes_hsok
ENSSPUG00000008244	-	61	58.376	ENSORLG00015013815	ncl	87	61.610	Oryzias_latipes_hsok
ENSSPUG00000008244	-	59	31.671	ENSOMEG00000015864	-	79	32.376	Oryzias_melastigma
ENSSPUG00000008244	-	59	60.309	ENSOMEG00000020786	ncl	50	60.154	Oryzias_melastigma
ENSSPUG00000008244	-	66	70.664	ENSPSIG00000002361	-	75	67.568	Pelodiscus_sinensis
ENSSPUG00000008244	-	57	60.401	ENSPMGG00000004709	ncl	79	62.080	Periophthalmus_magnuspinnatus
ENSSPUG00000008244	-	60	63.861	ENSPCIG00000003293	-	63	61.966	Phascolarctos_cinereus
ENSSPUG00000008244	-	61	57.683	ENSPFOG00000024205	ncl	62	54.800	Poecilia_formosa
ENSSPUG00000008244	-	61	57.683	ENSPLAG00000024026	ncl	51	58.794	Poecilia_latipinna
ENSSPUG00000008244	-	61	57.431	ENSPMEG00000006000	ncl	62	54.200	Poecilia_mexicana
ENSSPUG00000008244	-	54	60.471	ENSPNYG00000020494	ncl	53	60.256	Pundamilia_nyererei
ENSSPUG00000008244	-	60	59.391	ENSPNAG00000006192	ncl	64	53.971	Pygocentrus_nattereri
ENSSPUG00000008244	-	59	63.910	ENSSHAG00000007489	-	77	57.820	Sarcophilus_harrisii
ENSSPUG00000008244	-	60	60.652	ENSSHAG00000002702	-	96	54.186	Sarcophilus_harrisii
ENSSPUG00000008244	-	60	38.292	ENSSFOG00015013153	-	84	39.752	Scleropages_formosus
ENSSPUG00000008244	-	56	64.141	ENSSFOG00015008583	ncl	81	56.944	Scleropages_formosus
ENSSPUG00000008244	-	80	35.103	ENSSMAG00000007582	-	63	39.225	Scophthalmus_maximus
ENSSPUG00000008244	-	60	58.987	ENSSMAG00000021241	ncl	53	58.734	Scophthalmus_maximus
ENSSPUG00000008244	-	60	60.925	ENSSDUG00000006128	ncl	85	60.560	Seriola_dumerili
ENSSPUG00000008244	-	76	36.893	ENSSDUG00000010922	-	73	39.691	Seriola_dumerili
ENSSPUG00000008244	-	60	59.694	ENSSLDG00000002012	ncl	53	59.694	Seriola_lalandi_dorsalis
ENSSPUG00000008244	-	80	39.329	ENSSLDG00000015784	-	89	38.389	Seriola_lalandi_dorsalis
ENSSPUG00000008244	-	64	39.310	ENSSPAG00000001859	-	64	38.443	Stegastes_partitus
ENSSPUG00000008244	-	70	65.584	ENSTGUG00000009782	-	83	64.299	Taeniopygia_guttata
ENSSPUG00000008244	-	54	59.894	ENSTRUG00000008185	ncl	70	54.365	Takifugu_rubripes
ENSSPUG00000008244	-	57	59.151	ENSTNIG00000012186	ncl	78	50.203	Tetraodon_nigroviridis
ENSSPUG00000008244	-	60	62.907	ENSXETG00000009517	ncl	54	64.322	Xenopus_tropicalis
ENSSPUG00000008244	-	61	42.815	ENSXCOG00000003524	ncl	95	48.485	Xiphophorus_couchianus
ENSSPUG00000008244	-	61	33.738	ENSXCOG00000007369	-	90	34.491	Xiphophorus_couchianus
ENSSPUG00000008244	-	61	60.302	ENSXMAG00000005914	ncl	63	55.800	Xiphophorus_maculatus