EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000008389 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 43164 bases
Position: chrQEPC01012154.1:4182415-4225578
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000010984	KH_1	PF00013.29	5.7e-67	1	4
ENSSPUP00000010984	KH_1	PF00013.29	5.7e-67	2	4
ENSSPUP00000010984	KH_1	PF00013.29	5.7e-67	3	4
ENSSPUP00000010984	KH_1	PF00013.29	5.7e-67	4	4
ENSSPUP00000010955	KH_1	PF00013.29	5.8e-67	1	4
ENSSPUP00000010955	KH_1	PF00013.29	5.8e-67	2	4
ENSSPUP00000010955	KH_1	PF00013.29	5.8e-67	3	4
ENSSPUP00000010955	KH_1	PF00013.29	5.8e-67	4	4
ENSSPUP00000010914	KH_1	PF00013.29	5.9e-67	1	4
ENSSPUP00000010914	KH_1	PF00013.29	5.9e-67	2	4
ENSSPUP00000010914	KH_1	PF00013.29	5.9e-67	3	4
ENSSPUP00000010914	KH_1	PF00013.29	5.9e-67	4	4
ENSSPUP00000010900	KH_1	PF00013.29	6.8e-67	1	4
ENSSPUP00000010900	KH_1	PF00013.29	6.8e-67	2	4
ENSSPUP00000010900	KH_1	PF00013.29	6.8e-67	3	4
ENSSPUP00000010900	KH_1	PF00013.29	6.8e-67	4	4
ENSSPUP00000010984	KH_2	PF07650.17	1.1e-19	1	1
ENSSPUP00000010955	KH_2	PF07650.17	1.1e-19	1	1
ENSSPUP00000010914	KH_2	PF07650.17	1.1e-19	1	1
ENSSPUP00000010900	KH_2	PF07650.17	1.3e-19	1	1
ENSSPUP00000010984	DUF1897	PF09005.10	9.1e-15	1	2
ENSSPUP00000010984	DUF1897	PF09005.10	9.1e-15	2	2
ENSSPUP00000010955	DUF1897	PF09005.10	9.2e-15	1	2
ENSSPUP00000010955	DUF1897	PF09005.10	9.2e-15	2	2
ENSSPUP00000010900	DUF1897	PF09005.10	1.1e-14	1	2
ENSSPUP00000010900	DUF1897	PF09005.10	1.1e-14	2	2
ENSSPUP00000010914	DUF1897	PF09005.10	1.8e-12	1	2
ENSSPUP00000010914	DUF1897	PF09005.10	1.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011638	FUBP1-202	2113	-	ENSSPUP00000010914	671 (aa)	-	-
ENSSPUT00000011681	FUBP1-203	2110	-	ENSSPUP00000010955	670 (aa)	-	-
ENSSPUT00000011624	FUBP1-201	2173	-	ENSSPUP00000010900	691 (aa)	-	-
ENSSPUT00000011711	FUBP1-204	2467	-	ENSSPUP00000010984	668 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000008389	FUBP1	93	69.231	ENSSPUG00000013444	FUBP3	85	65.455
ENSSPUG00000008389	FUBP1	97	58.017	ENSSPUG00000016462	KHSRP	93	61.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008389	FUBP1	100	85.839	ENSG00000162613	FUBP1	100	93.534	Homo_sapiens
ENSSPUG00000008389	FUBP1	100	64.006	ENSAPOG00000014845	fubp1	100	64.047	Acanthochromis_polyacanthus
ENSSPUG00000008389	FUBP1	100	88.646	ENSAMEG00000007372	FUBP1	99	91.128	Ailuropoda_melanoleuca
ENSSPUG00000008389	FUBP1	100	63.280	ENSACIG00000020024	fubp1	99	64.574	Amphilophus_citrinellus
ENSSPUG00000008389	FUBP1	95	73.684	ENSAPEG00000012232	fubp1	99	63.839	Amphiprion_percula
ENSSPUG00000008389	FUBP1	100	67.438	ENSATEG00000018619	fubp1	99	68.398	Anabas_testudineus
ENSSPUG00000008389	FUBP1	94	88.491	ENSAPLG00000005965	FUBP1	100	89.228	Anas_platyrhynchos
ENSSPUG00000008389	FUBP1	99	94.684	ENSACAG00000006310	FUBP1	98	94.684	Anolis_carolinensis
ENSSPUG00000008389	FUBP1	99	73.684	ENSACLG00000006708	fubp1	99	69.298	Astatotilapia_calliptera
ENSSPUG00000008389	FUBP1	79	73.371	ENSAMXG00000005525	fubp1	99	72.812	Astyanax_mexicanus
ENSSPUG00000008389	FUBP1	100	86.111	ENSCJAG00000007062	FUBP1	99	88.654	Callithrix_jacchus
ENSSPUG00000008389	FUBP1	100	88.517	ENSCAFG00000020361	FUBP1	99	90.991	Canis_familiaris
ENSSPUG00000008389	FUBP1	94	85.848	ENSTSYG00000000148	FUBP1	99	88.907	Carlito_syrichta
ENSSPUG00000008389	FUBP1	53	97.436	ENSCAPG00000011052	-	67	97.436	Cavia_aperea
ENSSPUG00000008389	FUBP1	99	86.152	ENSCPOG00000002757	FUBP1	98	88.306	Cavia_porcellus
ENSSPUG00000008389	FUBP1	97	81.214	ENSCCAG00000036537	FUBP1	99	81.503	Cebus_capucinus
ENSSPUG00000008389	FUBP1	99	87.262	ENSCATG00000042126	FUBP1	100	89.442	Cercocebus_atys
ENSSPUG00000008389	FUBP1	100	86.131	ENSCLAG00000005621	FUBP1	99	88.671	Chinchilla_lanigera
ENSSPUG00000008389	FUBP1	100	85.839	ENSCSAG00000001402	FUBP1	99	88.369	Chlorocebus_sabaeus
ENSSPUG00000008389	FUBP1	99	86.384	ENSCHOG00000008177	FUBP1	98	88.554	Choloepus_hoffmanni
ENSSPUG00000008389	FUBP1	100	88.663	ENSCGRG00001007103	Fubp1	100	88.792	Cricetulus_griseus_chok1gshd
ENSSPUG00000008389	FUBP1	94	85.604	ENSCGRG00000003372	Fubp1	99	88.640	Cricetulus_griseus_crigri
ENSSPUG00000008389	FUBP1	100	62.678	ENSCSEG00000021412	fubp1	99	65.676	Cynoglossus_semilaevis
ENSSPUG00000008389	FUBP1	100	68.353	ENSCVAG00000014487	fubp1	99	68.444	Cyprinodon_variegatus
ENSSPUG00000008389	FUBP1	100	66.241	ENSDARG00000029248	fubp1	99	68.546	Danio_rerio
ENSSPUG00000008389	FUBP1	81	69.231	ENSDNOG00000034565	-	78	69.620	Dasypus_novemcinctus
ENSSPUG00000008389	FUBP1	99	86.091	ENSDORG00000016534	Fubp1	98	88.253	Dipodomys_ordii
ENSSPUG00000008389	FUBP1	71	96.221	ENSETEG00000000948	-	58	96.221	Echinops_telfairi
ENSSPUG00000008389	FUBP1	96	86.008	ENSEEUG00000001287	FUBP1	89	87.500	Erinaceus_europaeus
ENSSPUG00000008389	FUBP1	100	66.667	ENSELUG00000007990	fubp1	99	67.852	Esox_lucius
ENSSPUG00000008389	FUBP1	99	88.922	ENSFALG00000005768	FUBP1	99	89.185	Ficedula_albicollis
ENSSPUG00000008389	FUBP1	99	86.237	ENSFDAG00000014210	FUBP1	98	88.404	Fukomys_damarensis
ENSSPUG00000008389	FUBP1	100	68.353	ENSFHEG00000005230	fubp1	99	68.249	Fundulus_heteroclitus
ENSSPUG00000008389	FUBP1	100	59.942	ENSGMOG00000003370	fubp1	99	61.136	Gadus_morhua
ENSSPUG00000008389	FUBP1	100	87.135	ENSGALG00000008939	FUBP1	99	95.425	Gallus_gallus
ENSSPUG00000008389	FUBP1	100	68.353	ENSGAFG00000020972	fubp1	100	66.714	Gambusia_affinis
ENSSPUG00000008389	FUBP1	100	64.368	ENSGACG00000016563	fubp1	99	66.122	Gasterosteus_aculeatus
ENSSPUG00000008389	FUBP1	98	70.088	ENSHBUG00000009835	fubp1	97	72.008	Haplochromis_burtoni
ENSSPUG00000008389	FUBP1	100	85.756	ENSHGLG00000008415	-	99	88.271	Heterocephalus_glaber_female
ENSSPUG00000008389	FUBP1	100	76.239	ENSHGLG00000002808	-	99	79.394	Heterocephalus_glaber_female
ENSSPUG00000008389	FUBP1	100	76.676	ENSHGLG00100001414	-	99	79.848	Heterocephalus_glaber_male
ENSSPUG00000008389	FUBP1	100	85.756	ENSHGLG00100003417	-	99	88.271	Heterocephalus_glaber_male
ENSSPUG00000008389	FUBP1	100	66.906	ENSHCOG00000000910	fubp1	100	65.621	Hippocampus_comes
ENSSPUG00000008389	FUBP1	100	69.597	ENSIPUG00000009896	fubp1	97	71.739	Ictalurus_punctatus
ENSSPUG00000008389	FUBP1	100	85.985	ENSSTOG00000014312	FUBP1	100	88.520	Ictidomys_tridecemlineatus
ENSSPUG00000008389	FUBP1	100	85.735	ENSJJAG00000020069	Fubp1	99	88.253	Jaculus_jaculus
ENSSPUG00000008389	FUBP1	100	67.435	ENSKMAG00000018897	fubp1	99	68.390	Kryptolebias_marmoratus
ENSSPUG00000008389	FUBP1	99	66.284	ENSLBEG00000012700	fubp1	97	66.859	Labrus_bergylta
ENSSPUG00000008389	FUBP1	98	73.145	ENSLOCG00000003745	fubp1	99	72.529	Lepisosteus_oculatus
ENSSPUG00000008389	FUBP1	99	89.280	ENSLAFG00000003273	FUBP1	99	92.599	Loxodonta_africana
ENSSPUG00000008389	FUBP1	99	87.262	ENSMFAG00000031825	FUBP1	100	89.442	Macaca_fascicularis
ENSSPUG00000008389	FUBP1	100	89.083	ENSMMUG00000002899	FUBP1	100	91.114	Macaca_mulatta
ENSSPUG00000008389	FUBP1	99	87.262	ENSMNEG00000045212	FUBP1	100	89.442	Macaca_nemestrina
ENSSPUG00000008389	FUBP1	100	68.795	ENSMAMG00000007489	fubp1	99	68.076	Mastacembelus_armatus
ENSSPUG00000008389	FUBP1	100	67.677	ENSMZEG00005024298	fubp1	99	69.048	Maylandia_zebra
ENSSPUG00000008389	FUBP1	91	89.246	ENSMGAG00000009424	FUBP1	99	87.961	Meleagris_gallopavo
ENSSPUG00000008389	FUBP1	99	85.423	ENSMAUG00000016428	Fubp1	98	87.556	Mesocricetus_auratus
ENSSPUG00000008389	FUBP1	99	85.673	ENSMOCG00000014751	Fubp1	98	88.271	Microtus_ochrogaster
ENSSPUG00000008389	FUBP1	82	68.717	ENSMMOG00000019463	fubp1	98	69.550	Mola_mola
ENSSPUG00000008389	FUBP1	96	79.438	ENSMODG00000020804	FUBP1	100	82.137	Monodelphis_domestica
ENSSPUG00000008389	FUBP1	100	66.667	ENSMALG00000015173	fubp1	99	68.053	Monopterus_albus
ENSSPUG00000008389	FUBP1	100	85.401	MGP_CAROLIEiJ_G0025740	Fubp1	100	95.130	Mus_caroli
ENSSPUG00000008389	FUBP1	100	85.109	ENSMUSG00000028034	Fubp1	100	95.130	Mus_musculus
ENSSPUG00000008389	FUBP1	100	85.547	MGP_PahariEiJ_G0027191	Fubp1	100	95.455	Mus_pahari
ENSSPUG00000008389	FUBP1	100	85.255	MGP_SPRETEiJ_G0026693	Fubp1	100	95.130	Mus_spretus
ENSSPUG00000008389	FUBP1	68	93.724	ENSMLUG00000014802	FUBP1	99	89.671	Myotis_lucifugus
ENSSPUG00000008389	FUBP1	100	82.070	ENSNGAG00000014302	Fubp1	99	84.917	Nannospalax_galili
ENSSPUG00000008389	FUBP1	99	73.684	ENSNBRG00000015099	fubp1	99	63.772	Neolamprologus_brichardi
ENSSPUG00000008389	FUBP1	99	85.423	ENSNLEG00000009772	FUBP1	100	87.538	Nomascus_leucogenys
ENSSPUG00000008389	FUBP1	88	93.023	ENSMEUG00000007917	-	77	93.023	Notamacropus_eugenii
ENSSPUG00000008389	FUBP1	85	90.977	ENSOPRG00000001175	FUBP1	91	87.536	Ochotona_princeps
ENSSPUG00000008389	FUBP1	99	86.384	ENSODEG00000002600	-	98	88.554	Octodon_degus
ENSSPUG00000008389	FUBP1	99	58.754	ENSODEG00000003657	-	100	59.877	Octodon_degus
ENSSPUG00000008389	FUBP1	98	70.088	ENSONIG00000018381	fubp1	99	69.298	Oreochromis_niloticus
ENSSPUG00000008389	FUBP1	88	92.007	ENSOANG00000009777	FUBP1	100	92.007	Ornithorhynchus_anatinus
ENSSPUG00000008389	FUBP1	100	63.250	ENSORLG00000003540	fubp1	99	61.314	Oryzias_latipes
ENSSPUG00000008389	FUBP1	100	68.012	ENSORLG00020005908	fubp1	95	67.109	Oryzias_latipes_hni
ENSSPUG00000008389	FUBP1	100	67.914	ENSORLG00015008779	fubp1	99	66.814	Oryzias_latipes_hsok
ENSSPUG00000008389	FUBP1	100	67.821	ENSOMEG00000021943	fubp1	97	66.913	Oryzias_melastigma
ENSSPUG00000008389	FUBP1	100	88.133	ENSOGAG00000014233	FUBP1	99	90.583	Otolemur_garnettii
ENSSPUG00000008389	FUBP1	100	89.035	ENSOARG00000013259	FUBP1	99	91.528	Ovis_aries
ENSSPUG00000008389	FUBP1	100	85.985	ENSPPRG00000000413	FUBP1	99	88.520	Panthera_pardus
ENSSPUG00000008389	FUBP1	100	85.985	ENSPTIG00000019450	FUBP1	99	88.520	Panthera_tigris_altaica
ENSSPUG00000008389	FUBP1	92	90.779	ENSPSIG00000012965	FUBP1	99	87.541	Pelodiscus_sinensis
ENSSPUG00000008389	FUBP1	97	67.511	ENSPMGG00000009060	fubp1	99	65.527	Periophthalmus_magnuspinnatus
ENSSPUG00000008389	FUBP1	99	85.819	ENSPEMG00000021802	Fubp1	98	88.421	Peromyscus_maniculatus_bairdii
ENSSPUG00000008389	FUBP1	53	61.373	ENSPMAG00000001644	-	90	62.613	Petromyzon_marinus
ENSSPUG00000008389	FUBP1	100	68.966	ENSPFOG00000000238	fubp1	99	68.398	Poecilia_formosa
ENSSPUG00000008389	FUBP1	100	63.066	ENSPLAG00000021170	fubp1	99	66.172	Poecilia_latipinna
ENSSPUG00000008389	FUBP1	100	65.547	ENSPMEG00000004747	fubp1	99	69.677	Poecilia_mexicana
ENSSPUG00000008389	FUBP1	100	68.208	ENSPREG00000017911	fubp1	99	68.877	Poecilia_reticulata
ENSSPUG00000008389	FUBP1	66	94.360	ENSPPYG00000001219	-	70	94.360	Pongo_abelii
ENSSPUG00000008389	FUBP1	99	86.217	ENSPCAG00000012617	FUBP1	98	88.537	Procavia_capensis
ENSSPUG00000008389	FUBP1	100	85.985	ENSPCOG00000024974	FUBP1	100	87.688	Propithecus_coquereli
ENSSPUG00000008389	FUBP1	99	81.845	ENSPVAG00000014637	FUBP1	98	83.886	Pteropus_vampyrus
ENSSPUG00000008389	FUBP1	100	67.677	ENSPNYG00000004552	fubp1	99	69.048	Pundamilia_nyererei
ENSSPUG00000008389	FUBP1	100	68.588	ENSPNAG00000016207	fubp1	100	70.162	Pygocentrus_nattereri
ENSSPUG00000008389	FUBP1	100	85.693	ENSRNOG00000043370	Fubp1	99	88.671	Rattus_norvegicus
ENSSPUG00000008389	FUBP1	99	87.318	ENSRBIG00000042950	FUBP1	100	89.489	Rhinopithecus_bieti
ENSSPUG00000008389	FUBP1	99	87.318	ENSRROG00000043534	FUBP1	100	89.489	Rhinopithecus_roxellana
ENSSPUG00000008389	FUBP1	99	87.408	ENSSBOG00000027299	FUBP1	97	93.762	Saimiri_boliviensis_boliviensis
ENSSPUG00000008389	FUBP1	94	85.162	ENSSHAG00000005367	FUBP1	99	93.829	Sarcophilus_harrisii
ENSSPUG00000008389	FUBP1	99	70.839	ENSSFOG00015010213	fubp1	99	71.733	Scleropages_formosus
ENSSPUG00000008389	FUBP1	100	65.156	ENSSMAG00000012029	fubp1	98	66.959	Scophthalmus_maximus
ENSSPUG00000008389	FUBP1	100	68.162	ENSSDUG00000007383	fubp1	98	67.737	Seriola_dumerili
ENSSPUG00000008389	FUBP1	100	68.162	ENSSLDG00000022863	fubp1	98	67.737	Seriola_lalandi_dorsalis
ENSSPUG00000008389	FUBP1	84	94.828	ENSSARG00000011730	FUBP1	85	92.115	Sorex_araneus
ENSSPUG00000008389	FUBP1	100	67.681	ENSSPAG00000010161	fubp1	99	69.094	Stegastes_partitus
ENSSPUG00000008389	FUBP1	94	87.519	ENSTGUG00000006841	FUBP1	100	88.217	Taeniopygia_guttata
ENSSPUG00000008389	FUBP1	97	65.318	ENSTRUG00000004615	fubp1	99	65.805	Takifugu_rubripes
ENSSPUG00000008389	FUBP1	79	95.726	ENSTBEG00000017333	FUBP1	66	95.726	Tupaia_belangeri
ENSSPUG00000008389	FUBP1	99	86.091	ENSTTRG00000000096	FUBP1	98	88.253	Tursiops_truncatus
ENSSPUG00000008389	FUBP1	99	86.091	ENSVPAG00000004709	FUBP1	99	88.253	Vicugna_pacos
ENSSPUG00000008389	FUBP1	100	61.786	ENSXCOG00000019354	fubp1	99	63.158	Xiphophorus_couchianus
ENSSPUG00000008389	FUBP1	93	69.182	ENSXMAG00000007168	fubp1	99	69.516	Xiphophorus_maculatus