EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000008539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 34560 bases
Position: chrQEPC01010085.1:353135-387694
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011130	RRM_1	PF00076.22	1.8e-16	1	2
ENSSPUP00000011130	RRM_1	PF00076.22	1.8e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011863	-	1563	-	ENSSPUP00000011130	520 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000008539	-	93	90.515	ENSSPUG00000003872	-	93	88.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008539	-	92	72.107	ENSG00000185946	RNPC3	96	70.370	Homo_sapiens
ENSSPUG00000008539	-	97	70.428	ENSAMEG00000001694	RNPC3	93	72.840	Ailuropoda_melanoleuca
ENSSPUG00000008539	-	95	54.241	ENSACIG00000021043	rnpc3	97	54.241	Amphilophus_citrinellus
ENSSPUG00000008539	-	95	54.883	ENSATEG00000021263	rnpc3	97	55.078	Anabas_testudineus
ENSSPUG00000008539	-	85	81.591	ENSAPLG00000015605	RNPC3	98	81.591	Anas_platyrhynchos
ENSSPUG00000008539	-	93	78.512	ENSACAG00000002029	RNPC3	94	74.636	Anolis_carolinensis
ENSSPUG00000008539	-	92	71.281	ENSANAG00000019950	RNPC3	93	70.928	Aotus_nancymaae
ENSSPUG00000008539	-	92	56.549	ENSACLG00000014702	rnpc3	95	56.549	Astatotilapia_calliptera
ENSSPUG00000008539	-	92	54.694	ENSAMXG00000033372	rnpc3	95	56.122	Astyanax_mexicanus
ENSSPUG00000008539	-	94	70.968	ENSBTAG00000019091	RNPC3	95	70.624	Bos_taurus
ENSSPUG00000008539	-	92	71.074	ENSCJAG00000035686	RNPC3	93	70.928	Callithrix_jacchus
ENSSPUG00000008539	-	94	71.602	ENSCAFG00000019972	RNPC3	95	71.255	Canis_familiaris
ENSSPUG00000008539	-	94	71.805	ENSCAFG00020011300	RNPC3	95	71.457	Canis_lupus_dingo
ENSSPUG00000008539	-	94	70.766	ENSCHIG00000020361	RNPC3	95	70.423	Capra_hircus
ENSSPUG00000008539	-	97	68.885	ENSTSYG00000030256	RNPC3	95	70.040	Carlito_syrichta
ENSSPUG00000008539	-	83	63.158	ENSCAPG00000013600	RNPC3	97	62.645	Cavia_aperea
ENSSPUG00000008539	-	94	70.385	ENSCPOG00000031638	RNPC3	95	70.183	Cavia_porcellus
ENSSPUG00000008539	-	92	71.488	ENSCCAG00000024301	RNPC3	93	71.134	Cebus_capucinus
ENSSPUG00000008539	-	93	55.350	ENSCATG00000035930	-	51	66.814	Cercocebus_atys
ENSSPUG00000008539	-	92	72.107	ENSCATG00000002086	RNPC3	93	71.546	Cercocebus_atys
ENSSPUG00000008539	-	94	69.777	ENSCLAG00000005169	RNPC3	95	69.636	Chinchilla_lanigera
ENSSPUG00000008539	-	92	72.107	ENSCSAG00000001519	RNPC3	93	71.546	Chlorocebus_sabaeus
ENSSPUG00000008539	-	97	80.868	ENSCPBG00000028311	RNPC3	98	81.262	Chrysemys_picta_bellii
ENSSPUG00000008539	-	92	71.694	ENSCANG00000031444	RNPC3	93	71.134	Colobus_angolensis_palliatus
ENSSPUG00000008539	-	96	68.836	ENSCGRG00001019276	Rnpc3	95	69.636	Cricetulus_griseus_chok1gshd
ENSSPUG00000008539	-	86	69.011	ENSCGRG00000000053	Rnpc3	99	69.095	Cricetulus_griseus_crigri
ENSSPUG00000008539	-	96	53.479	ENSCSEG00000013475	rnpc3	96	53.320	Cynoglossus_semilaevis
ENSSPUG00000008539	-	92	56.795	ENSCVAG00000002645	rnpc3	95	56.795	Cyprinodon_variegatus
ENSSPUG00000008539	-	93	56.795	ENSDARG00000011247	rnpc3	88	66.667	Danio_rerio
ENSSPUG00000008539	-	98	69.942	ENSDNOG00000044555	-	95	71.862	Dasypus_novemcinctus
ENSSPUG00000008539	-	98	69.750	ENSDNOG00000047498	-	95	71.660	Dasypus_novemcinctus
ENSSPUG00000008539	-	95	70.080	ENSDORG00000027343	Rnpc3	95	69.919	Dipodomys_ordii
ENSSPUG00000008539	-	94	46.654	ENSEBUG00000002068	rnpc3	97	46.654	Eptatretus_burgeri
ENSSPUG00000008539	-	94	71.748	ENSEASG00005015957	RNPC3	95	71.400	Equus_asinus_asinus
ENSSPUG00000008539	-	94	71.748	ENSECAG00000021148	RNPC3	95	71.400	Equus_caballus
ENSSPUG00000008539	-	94	54.776	ENSELUG00000002264	rnpc3	95	55.888	Esox_lucius
ENSSPUG00000008539	-	95	71.400	ENSFCAG00000024312	RNPC3	95	71.862	Felis_catus
ENSSPUG00000008539	-	85	80.000	ENSFALG00000002580	RNPC3	98	80.000	Ficedula_albicollis
ENSSPUG00000008539	-	98	69.171	ENSFDAG00000019948	RNPC3	95	71.053	Fukomys_damarensis
ENSSPUG00000008539	-	92	51.738	ENSFHEG00000020647	rnpc3	97	46.667	Fundulus_heteroclitus
ENSSPUG00000008539	-	93	55.804	ENSGMOG00000019213	rnpc3	95	55.876	Gadus_morhua
ENSSPUG00000008539	-	95	79.234	ENSGALG00000005162	RNPC3	92	78.543	Gallus_gallus
ENSSPUG00000008539	-	92	56.998	ENSGAFG00000017236	rnpc3	95	56.389	Gambusia_affinis
ENSSPUG00000008539	-	93	55.691	ENSGACG00000002048	rnpc3	95	55.556	Gasterosteus_aculeatus
ENSSPUG00000008539	-	97	80.784	ENSGAGG00000008438	RNPC3	98	80.392	Gopherus_agassizii
ENSSPUG00000008539	-	92	61.635	ENSGGOG00000026201	-	92	61.378	Gorilla_gorilla
ENSSPUG00000008539	-	76	71.795	ENSHBUG00000015966	rnpc3	81	71.795	Haplochromis_burtoni
ENSSPUG00000008539	-	94	70.994	ENSHGLG00000001708	RNPC3	95	70.791	Heterocephalus_glaber_female
ENSSPUG00000008539	-	94	70.994	ENSHGLG00100003005	RNPC3	95	70.791	Heterocephalus_glaber_male
ENSSPUG00000008539	-	92	56.879	ENSHCOG00000017135	rnpc3	95	56.701	Hippocampus_comes
ENSSPUG00000008539	-	92	71.694	ENSSTOG00000025020	RNPC3	93	71.488	Ictidomys_tridecemlineatus
ENSSPUG00000008539	-	94	69.636	ENSJJAG00000010203	Rnpc3	96	69.293	Jaculus_jaculus
ENSSPUG00000008539	-	92	55.624	ENSKMAG00000017358	rnpc3	96	50.598	Kryptolebias_marmoratus
ENSSPUG00000008539	-	95	66.068	ENSLACG00000005720	RNPC3	91	63.968	Latimeria_chalumnae
ENSSPUG00000008539	-	92	62.140	ENSLOCG00000007986	rnpc3	95	59.671	Lepisosteus_oculatus
ENSSPUG00000008539	-	94	69.416	ENSLAFG00000032342	RNPC3	95	69.231	Loxodonta_africana
ENSSPUG00000008539	-	93	54.433	ENSMFAG00000002917	-	85	60.880	Macaca_fascicularis
ENSSPUG00000008539	-	92	71.901	ENSMFAG00000002004	RNPC3	93	71.340	Macaca_fascicularis
ENSSPUG00000008539	-	76	69.652	ENSMMUG00000002098	-	84	69.652	Macaca_mulatta
ENSSPUG00000008539	-	92	71.694	ENSMMUG00000018039	RNPC3	93	71.134	Macaca_mulatta
ENSSPUG00000008539	-	74	59.126	ENSMNEG00000029209	-	53	63.223	Macaca_nemestrina
ENSSPUG00000008539	-	92	67.769	ENSMNEG00000033950	RNPC3	93	67.629	Macaca_nemestrina
ENSSPUG00000008539	-	95	54.309	ENSMLEG00000034644	-	93	55.761	Mandrillus_leucophaeus
ENSSPUG00000008539	-	92	72.107	ENSMLEG00000033628	RNPC3	93	71.546	Mandrillus_leucophaeus
ENSSPUG00000008539	-	94	53.094	ENSMAMG00000007496	rnpc3	97	53.082	Mastacembelus_armatus
ENSSPUG00000008539	-	94	54.038	ENSMZEG00005020233	rnpc3	96	55.444	Maylandia_zebra
ENSSPUG00000008539	-	85	80.942	ENSMGAG00000006381	RNPC3	98	80.942	Meleagris_gallopavo
ENSSPUG00000008539	-	92	71.014	ENSMAUG00000001358	Rnpc3	95	70.325	Mesocricetus_auratus
ENSSPUG00000008539	-	94	71.573	ENSMICG00000029591	RNPC3	95	71.227	Microcebus_murinus
ENSSPUG00000008539	-	92	71.074	ENSMOCG00000013423	Rnpc3	93	70.722	Microtus_ochrogaster
ENSSPUG00000008539	-	92	76.458	ENSMODG00000002946	RNPC3	94	75.000	Monodelphis_domestica
ENSSPUG00000008539	-	98	67.568	MGP_CAROLIEiJ_G0025555	Rnpc3	96	69.168	Mus_caroli
ENSSPUG00000008539	-	98	67.761	ENSMUSG00000027981	Rnpc3	99	69.330	Mus_musculus
ENSSPUG00000008539	-	96	68.056	MGP_PahariEiJ_G0027001	Rnpc3	96	68.763	Mus_pahari
ENSSPUG00000008539	-	98	67.761	MGP_SPRETEiJ_G0026505	Rnpc3	96	69.168	Mus_spretus
ENSSPUG00000008539	-	94	72.414	ENSMPUG00000007349	RNPC3	95	72.065	Mustela_putorius_furo
ENSSPUG00000008539	-	98	69.364	ENSMLUG00000028743	RNPC3	95	71.053	Myotis_lucifugus
ENSSPUG00000008539	-	94	70.183	ENSNGAG00000010939	Rnpc3	95	69.980	Nannospalax_galili
ENSSPUG00000008539	-	95	55.758	ENSNBRG00000012196	rnpc3	94	55.758	Neolamprologus_brichardi
ENSSPUG00000008539	-	92	71.901	ENSNLEG00000012013	RNPC3	93	71.340	Nomascus_leucogenys
ENSSPUG00000008539	-	94	70.385	ENSODEG00000007612	RNPC3	95	69.980	Octodon_degus
ENSSPUG00000008539	-	95	55.865	ENSONIG00000004770	rnpc3	100	56.452	Oreochromis_niloticus
ENSSPUG00000008539	-	89	73.077	ENSOANG00000008220	RNPC3	99	73.504	Ornithorhynchus_anatinus
ENSSPUG00000008539	-	94	69.618	ENSOCUG00000004016	RNPC3	95	69.636	Oryctolagus_cuniculus
ENSSPUG00000008539	-	95	56.275	ENSORLG00000005694	rnpc3	97	56.275	Oryzias_latipes
ENSSPUG00000008539	-	95	56.275	ENSORLG00020005513	rnpc3	97	56.275	Oryzias_latipes_hni
ENSSPUG00000008539	-	95	56.073	ENSORLG00015002179	rnpc3	97	56.073	Oryzias_latipes_hsok
ENSSPUG00000008539	-	94	71.313	ENSOGAG00000026182	RNPC3	95	70.968	Otolemur_garnettii
ENSSPUG00000008539	-	94	70.766	ENSOARG00000018719	RNPC3	95	70.423	Ovis_aries
ENSSPUG00000008539	-	92	71.959	ENSPPAG00000037459	RNPC3	93	71.399	Pan_paniscus
ENSSPUG00000008539	-	92	61.216	ENSPPAG00000030278	-	93	61.715	Pan_paniscus
ENSSPUG00000008539	-	95	71.400	ENSPPRG00000020246	RNPC3	95	71.862	Panthera_pardus
ENSSPUG00000008539	-	95	71.400	ENSPTIG00000009887	RNPC3	97	71.862	Panthera_tigris_altaica
ENSSPUG00000008539	-	93	59.426	ENSPTRG00000044227	-	93	60.632	Pan_troglodytes
ENSSPUG00000008539	-	92	71.901	ENSPTRG00000033902	RNPC3	93	71.340	Pan_troglodytes
ENSSPUG00000008539	-	95	57.980	ENSPANG00000029957	-	50	65.401	Papio_anubis
ENSSPUG00000008539	-	92	72.107	ENSPANG00000012137	RNPC3	93	71.546	Papio_anubis
ENSSPUG00000008539	-	95	55.888	ENSPKIG00000008828	rnpc3	96	54.819	Paramormyrops_kingsleyae
ENSSPUG00000008539	-	61	81.191	ENSPSIG00000007396	RNPC3	97	82.445	Pelodiscus_sinensis
ENSSPUG00000008539	-	92	51.619	ENSPMGG00000011742	rnpc3	95	51.822	Periophthalmus_magnuspinnatus
ENSSPUG00000008539	-	87	68.559	ENSPEMG00000020112	Rnpc3	99	68.874	Peromyscus_maniculatus_bairdii
ENSSPUG00000008539	-	95	41.101	ENSPMAG00000003778	rnpc3	50	48.507	Petromyzon_marinus
ENSSPUG00000008539	-	92	76.458	ENSPCIG00000004415	-	94	75.000	Phascolarctos_cinereus
ENSSPUG00000008539	-	92	55.936	ENSPFOG00000009895	rnpc3	95	56.619	Poecilia_formosa
ENSSPUG00000008539	-	92	56.823	ENSPLAG00000012023	rnpc3	95	57.230	Poecilia_latipinna
ENSSPUG00000008539	-	92	56.137	ENSPMEG00000003663	rnpc3	95	56.823	Poecilia_mexicana
ENSSPUG00000008539	-	92	55.936	ENSPREG00000010206	rnpc3	95	56.823	Poecilia_reticulata
ENSSPUG00000008539	-	78	65.942	ENSPPYG00000001102	RNPC3	93	65.937	Pongo_abelii
ENSSPUG00000008539	-	92	56.341	ENSPNYG00000020603	rnpc3	95	56.341	Pundamilia_nyererei
ENSSPUG00000008539	-	96	69.565	ENSRNOG00000017310	Rnpc3	95	70.101	Rattus_norvegicus
ENSSPUG00000008539	-	92	67.010	ENSRBIG00000043897	RNPC3	93	66.872	Rhinopithecus_bieti
ENSSPUG00000008539	-	92	72.107	ENSRROG00000032334	RNPC3	93	71.546	Rhinopithecus_roxellana
ENSSPUG00000008539	-	96	69.094	ENSSBOG00000024473	RNPC3	94	70.928	Saimiri_boliviensis_boliviensis
ENSSPUG00000008539	-	92	75.464	ENSSHAG00000011859	RNPC3	94	74.227	Sarcophilus_harrisii
ENSSPUG00000008539	-	94	59.959	ENSSFOG00015013055	rnpc3	99	60.446	Scleropages_formosus
ENSSPUG00000008539	-	93	55.070	ENSSMAG00000020346	rnpc3	95	54.930	Scophthalmus_maximus
ENSSPUG00000008539	-	92	56.795	ENSSDUG00000006600	rnpc3	95	56.795	Seriola_dumerili
ENSSPUG00000008539	-	92	56.795	ENSSLDG00000007979	rnpc3	95	56.998	Seriola_lalandi_dorsalis
ENSSPUG00000008539	-	94	70.588	ENSSSCG00000037254	RNPC3	95	70.994	Sus_scrofa
ENSSPUG00000008539	-	85	79.545	ENSTGUG00000004795	-	98	77.727	Taeniopygia_guttata
ENSSPUG00000008539	-	92	56.405	ENSTNIG00000018963	rnpc3	95	56.405	Tetraodon_nigroviridis
ENSSPUG00000008539	-	94	72.819	ENSUMAG00000007775	RNPC3	97	72.470	Ursus_maritimus
ENSSPUG00000008539	-	94	71.805	ENSVVUG00000000331	RNPC3	95	71.457	Vulpes_vulpes
ENSSPUG00000008539	-	96	51.538	ENSXETG00000025027	rnpc3	97	50.290	Xenopus_tropicalis
ENSSPUG00000008539	-	92	54.509	ENSXMAG00000006495	rnpc3	95	55.912	Xiphophorus_maculatus