EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000008560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 5504 bases
Position: chrQEPC01008173.1:1121623-1127126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011144	Ribosomal_L7Ae	PF01248.26	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011877	-	807	-	ENSSPUP00000011144	268 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000008560	-	98	90.146	ENSSPUG00000005237	-	96	90.146
ENSSPUG00000008560	-	98	90.146	ENSSPUG00000018363	-	97	90.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008560	-	97	53.986	ENSG00000152464	RPP38	93	61.146	Homo_sapiens
ENSSPUG00000008560	-	90	42.529	ENSAPOG00000001240	rpp38	92	42.857	Acanthochromis_polyacanthus
ENSSPUG00000008560	-	97	55.636	ENSAMEG00000018832	RPP38	96	55.636	Ailuropoda_melanoleuca
ENSSPUG00000008560	-	90	41.065	ENSACIG00000011592	rpp38	93	40.000	Amphilophus_citrinellus
ENSSPUG00000008560	-	90	40.293	ENSAOCG00000017293	rpp38	92	40.647	Amphiprion_ocellaris
ENSSPUG00000008560	-	90	42.636	ENSAPEG00000002315	rpp38	92	42.966	Amphiprion_percula
ENSSPUG00000008560	-	92	40.370	ENSATEG00000000731	rpp38	94	40.370	Anabas_testudineus
ENSSPUG00000008560	-	91	52.918	ENSAPLG00000002054	RPP38	95	53.903	Anas_platyrhynchos
ENSSPUG00000008560	-	66	46.701	ENSACLG00000016958	rpp38	95	41.758	Astatotilapia_calliptera
ENSSPUG00000008560	-	66	46.193	ENSACLG00000016962	rpp38	95	41.392	Astatotilapia_calliptera
ENSSPUG00000008560	-	90	39.286	ENSAMXG00000025023	rpp38	94	40.741	Astyanax_mexicanus
ENSSPUG00000008560	-	97	48.921	ENSBTAG00000007702	RPP38	96	50.000	Bos_taurus
ENSSPUG00000008560	-	97	53.818	ENSCAFG00000024373	RPP38	96	53.818	Canis_familiaris
ENSSPUG00000008560	-	97	53.818	ENSCAFG00020008008	RPP38	96	53.818	Canis_lupus_dingo
ENSSPUG00000008560	-	97	48.561	ENSCHIG00000012484	RPP38	96	49.638	Capra_hircus
ENSSPUG00000008560	-	98	53.214	ENSCPOG00000003981	RPP38	96	53.597	Cavia_porcellus
ENSSPUG00000008560	-	97	53.986	ENSCLAG00000010194	RPP38	96	53.986	Chinchilla_lanigera
ENSSPUG00000008560	-	91	51.751	ENSCSAG00000019055	RPP38	96	53.455	Chlorocebus_sabaeus
ENSSPUG00000008560	-	97	55.435	ENSCHOG00000004335	RPP38	96	56.159	Choloepus_hoffmanni
ENSSPUG00000008560	-	99	49.819	ENSCGRG00001001395	Rpp38	97	51.264	Cricetulus_griseus_chok1gshd
ENSSPUG00000008560	-	99	49.819	ENSCGRG00000017441	Rpp38	97	51.264	Cricetulus_griseus_crigri
ENSSPUG00000008560	-	90	40.856	ENSCSEG00000001721	rpp38	95	41.418	Cynoglossus_semilaevis
ENSSPUG00000008560	-	90	39.394	ENSCVAG00000001676	rpp38	92	39.777	Cyprinodon_variegatus
ENSSPUG00000008560	-	91	41.221	ENSDARG00000040350	rpp38	94	41.516	Danio_rerio
ENSSPUG00000008560	-	97	53.818	ENSDNOG00000040314	RPP38	96	54.182	Dasypus_novemcinctus
ENSSPUG00000008560	-	99	48.736	ENSDORG00000009783	Rpp38	97	48.736	Dipodomys_ordii
ENSSPUG00000008560	-	97	53.480	ENSETEG00000002839	RPP38	96	53.480	Echinops_telfairi
ENSSPUG00000008560	-	96	51.292	ENSEASG00005019783	RPP38	94	51.661	Equus_asinus_asinus
ENSSPUG00000008560	-	97	49.275	ENSEEUG00000014677	RPP38	96	50.000	Erinaceus_europaeus
ENSSPUG00000008560	-	91	38.989	ENSELUG00000010160	rpp38	96	39.721	Esox_lucius
ENSSPUG00000008560	-	98	51.986	ENSFCAG00000022449	RPP38	96	52.364	Felis_catus
ENSSPUG00000008560	-	91	51.575	ENSFALG00000014804	RPP38	92	52.632	Ficedula_albicollis
ENSSPUG00000008560	-	97	55.797	ENSFDAG00000018669	RPP38	96	55.797	Fukomys_damarensis
ENSSPUG00000008560	-	90	43.820	ENSFHEG00000013741	rpp38	92	44.118	Fundulus_heteroclitus
ENSSPUG00000008560	-	92	57.308	ENSGALG00000008794	RPP38	91	57.778	Gallus_gallus
ENSSPUG00000008560	-	55	49.669	ENSGACG00000009258	rpp38	90	49.669	Gasterosteus_aculeatus
ENSSPUG00000008560	-	66	46.193	ENSHBUG00000010937	rpp38	92	41.199	Haplochromis_burtoni
ENSSPUG00000008560	-	97	52.899	ENSHGLG00000012144	RPP38	96	52.899	Heterocephalus_glaber_female
ENSSPUG00000008560	-	90	38.492	ENSIPUG00000022879	rpp38	92	39.695	Ictalurus_punctatus
ENSSPUG00000008560	-	97	51.449	ENSSTOG00000025699	RPP38	94	52.174	Ictidomys_tridecemlineatus
ENSSPUG00000008560	-	99	51.799	ENSJJAG00000007523	Rpp38	97	51.799	Jaculus_jaculus
ENSSPUG00000008560	-	90	40.530	ENSKMAG00000003986	rpp38	91	40.892	Kryptolebias_marmoratus
ENSSPUG00000008560	-	92	38.828	ENSLBEG00000006853	rpp38	93	39.194	Labrus_bergylta
ENSSPUG00000008560	-	93	44.891	ENSLACG00000006502	RPP38	97	45.486	Latimeria_chalumnae
ENSSPUG00000008560	-	93	41.935	ENSLOCG00000018347	rpp38	93	45.091	Lepisosteus_oculatus
ENSSPUG00000008560	-	97	54.909	ENSLAFG00000000509	RPP38	96	54.909	Loxodonta_africana
ENSSPUG00000008560	-	91	51.751	ENSMMUG00000007679	RPP38	96	53.455	Macaca_mulatta
ENSSPUG00000008560	-	92	42.146	ENSMAMG00000012774	rpp38	92	42.146	Mastacembelus_armatus
ENSSPUG00000008560	-	66	46.701	ENSMZEG00005003189	rpp38	92	41.573	Maylandia_zebra
ENSSPUG00000008560	-	66	46.701	ENSMZEG00005003200	rpp38	95	41.758	Maylandia_zebra
ENSSPUG00000008560	-	92	57.308	ENSMGAG00000008217	RPP38	91	57.778	Meleagris_gallopavo
ENSSPUG00000008560	-	99	50.182	ENSMAUG00000003644	Rpp38	97	50.542	Mesocricetus_auratus
ENSSPUG00000008560	-	99	52.158	ENSMOCG00000007020	Rpp38	97	52.158	Microtus_ochrogaster
ENSSPUG00000008560	-	92	36.981	ENSMMOG00000003446	rpp38	92	38.550	Mola_mola
ENSSPUG00000008560	-	93	55.556	ENSMODG00000024091	RPP38	98	55.636	Monodelphis_domestica
ENSSPUG00000008560	-	92	38.686	ENSMALG00000002356	rpp38	93	38.686	Monopterus_albus
ENSSPUG00000008560	-	99	51.087	MGP_CAROLIEiJ_G0023133	Rpp38	97	51.087	Mus_caroli
ENSSPUG00000008560	-	99	51.449	ENSMUSG00000049950	Rpp38	97	51.449	Mus_musculus
ENSSPUG00000008560	-	99	50.725	MGP_PahariEiJ_G0019193	Rpp38	97	50.725	Mus_pahari
ENSSPUG00000008560	-	99	51.087	MGP_SPRETEiJ_G0024051	Rpp38	97	51.087	Mus_spretus
ENSSPUG00000008560	-	96	54.044	ENSMPUG00000018523	RPP38	95	52.941	Mustela_putorius_furo
ENSSPUG00000008560	-	91	50.973	ENSMLUG00000002153	RPP38	96	53.091	Myotis_lucifugus
ENSSPUG00000008560	-	99	50.179	ENSNGAG00000011066	Rpp38	97	50.896	Nannospalax_galili
ENSSPUG00000008560	-	66	43.781	ENSNBRG00000006994	rpp38	93	39.852	Neolamprologus_brichardi
ENSSPUG00000008560	-	90	39.922	ENSONIG00000020467	rpp38	91	41.065	Oreochromis_niloticus
ENSSPUG00000008560	-	91	49.807	ENSOCUG00000022768	-	96	52.000	Oryctolagus_cuniculus
ENSSPUG00000008560	-	91	49.807	ENSOCUG00000024367	-	96	52.000	Oryctolagus_cuniculus
ENSSPUG00000008560	-	92	41.445	ENSORLG00000009219	rpp38	97	41.935	Oryzias_latipes
ENSSPUG00000008560	-	90	39.924	ENSORLG00020011503	rpp38	91	41.455	Oryzias_latipes_hni
ENSSPUG00000008560	-	90	39.768	ENSORLG00015017702	rpp38	91	41.328	Oryzias_latipes_hsok
ENSSPUG00000008560	-	90	40.310	ENSOMEG00000005414	rpp38	95	41.455	Oryzias_melastigma
ENSSPUG00000008560	-	97	52.000	ENSOGAG00000008059	RPP38	96	52.000	Otolemur_garnettii
ENSSPUG00000008560	-	97	48.921	ENSOARG00000004534	RPP38	96	50.362	Ovis_aries
ENSSPUG00000008560	-	97	54.348	ENSPPAG00000041577	RPP38	87	53.986	Pan_paniscus
ENSSPUG00000008560	-	98	52.347	ENSPPRG00000015329	RPP38	97	52.347	Panthera_pardus
ENSSPUG00000008560	-	98	53.069	ENSPTIG00000007188	RPP38	97	53.069	Panthera_tigris_altaica
ENSSPUG00000008560	-	97	54.348	ENSPTRG00000002318	RPP38	87	54.710	Pan_troglodytes
ENSSPUG00000008560	-	93	43.590	ENSPKIG00000025652	rpp38	93	43.682	Paramormyrops_kingsleyae
ENSSPUG00000008560	-	97	65.934	ENSPSIG00000001527	RPP38	97	65.934	Pelodiscus_sinensis
ENSSPUG00000008560	-	99	50.903	ENSPEMG00000008375	Rpp38	97	51.986	Peromyscus_maniculatus_bairdii
ENSSPUG00000008560	-	98	54.182	ENSPCIG00000009096	RPP38	92	54.182	Phascolarctos_cinereus
ENSSPUG00000008560	-	61	44.199	ENSPFOG00000016823	rpp38	82	44.199	Poecilia_formosa
ENSSPUG00000008560	-	92	37.736	ENSPLAG00000007626	rpp38	93	39.630	Poecilia_latipinna
ENSSPUG00000008560	-	90	36.822	ENSPMEG00000020392	rpp38	95	38.686	Poecilia_mexicana
ENSSPUG00000008560	-	91	38.491	ENSPREG00000017744	rpp38	94	40.449	Poecilia_reticulata
ENSSPUG00000008560	-	97	53.623	ENSPPYG00000002113	RPP38	96	53.986	Pongo_abelii
ENSSPUG00000008560	-	91	51.550	ENSPVAG00000007155	RPP38	96	53.623	Pteropus_vampyrus
ENSSPUG00000008560	-	66	46.701	ENSPNYG00000004293	rpp38	92	41.573	Pundamilia_nyererei
ENSSPUG00000008560	-	90	37.891	ENSPNAG00000010633	rpp38	96	39.781	Pygocentrus_nattereri
ENSSPUG00000008560	-	97	52.222	ENSRNOG00000038025	Rpp38	96	52.222	Rattus_norvegicus
ENSSPUG00000008560	-	98	56.364	ENSSHAG00000015529	RPP38	98	56.364	Sarcophilus_harrisii
ENSSPUG00000008560	-	92	41.221	ENSSMAG00000018276	rpp38	92	41.221	Scophthalmus_maximus
ENSSPUG00000008560	-	93	41.199	ENSSDUG00000001651	rpp38	96	41.818	Seriola_dumerili
ENSSPUG00000008560	-	93	41.132	ENSSLDG00000014355	rpp38	96	41.328	Seriola_lalandi_dorsalis
ENSSPUG00000008560	-	98	43.066	ENSSARG00000012099	RPP38	96	43.066	Sorex_araneus
ENSSPUG00000008560	-	90	40.856	ENSSPAG00000020387	rpp38	95	40.741	Stegastes_partitus
ENSSPUG00000008560	-	97	50.896	ENSSSCG00000027110	RPP38	96	50.896	Sus_scrofa
ENSSPUG00000008560	-	91	52.756	ENSTGUG00000001366	RPP38	95	53.759	Taeniopygia_guttata
ENSSPUG00000008560	-	90	42.023	ENSTNIG00000001334	rpp38	91	42.023	Tetraodon_nigroviridis
ENSSPUG00000008560	-	97	52.174	ENSTTRG00000004420	RPP38	96	52.174	Tursiops_truncatus
ENSSPUG00000008560	-	97	54.182	ENSUAMG00000002618	RPP38	96	54.182	Ursus_americanus
ENSSPUG00000008560	-	97	52.482	ENSUMAG00000012382	RPP38	96	54.152	Ursus_maritimus
ENSSPUG00000008560	-	97	53.455	ENSVVUG00000005272	RPP38	96	53.455	Vulpes_vulpes
ENSSPUG00000008560	-	93	45.290	ENSXETG00000003419	rpp38	97	45.965	Xenopus_tropicalis