EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000008609 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 100123 bases
Position: chrQEPC01006122.1:1228738-1328860
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011233	MIF4G_like	PF09088.11	7e-37	1	1
ENSSPUP00000011233	MIF4G_like_2	PF09090.11	1.6e-86	1	1
ENSSPUP00000011233	MIF4G	PF02854.19	4.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000011970	NCBP1-201	2295	-	ENSSPUP00000011233	764 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008609	NCBP1	100	82.152	ENSG00000136937	NCBP1	100	82.152	Homo_sapiens
ENSSPUG00000008609	NCBP1	99	78.463	ENSAPOG00000008002	NCBP1	99	78.338	Acanthochromis_polyacanthus
ENSSPUG00000008609	NCBP1	100	81.944	ENSAMEG00000004763	NCBP1	100	81.944	Ailuropoda_melanoleuca
ENSSPUG00000008609	NCBP1	99	78.058	ENSACIG00000000274	NCBP1	99	78.184	Amphilophus_citrinellus
ENSSPUG00000008609	NCBP1	99	78.338	ENSAOCG00000021148	NCBP1	99	78.212	Amphiprion_ocellaris
ENSSPUG00000008609	NCBP1	99	78.338	ENSAPEG00000001701	NCBP1	99	78.212	Amphiprion_percula
ENSSPUG00000008609	NCBP1	99	78.086	ENSATEG00000006929	NCBP1	99	78.086	Anabas_testudineus
ENSSPUG00000008609	NCBP1	95	85.337	ENSAPLG00000016318	NCBP1	100	85.469	Anas_platyrhynchos
ENSSPUG00000008609	NCBP1	100	83.416	ENSACAG00000004409	NCBP1	87	83.396	Anolis_carolinensis
ENSSPUG00000008609	NCBP1	100	80.278	ENSANAG00000025744	NCBP1	99	81.415	Aotus_nancymaae
ENSSPUG00000008609	NCBP1	99	77.960	ENSACLG00000014812	NCBP1	99	77.960	Astatotilapia_calliptera
ENSSPUG00000008609	NCBP1	99	76.884	ENSAMXG00000016364	NCBP1	99	76.759	Astyanax_mexicanus
ENSSPUG00000008609	NCBP1	100	81.899	ENSBTAG00000009732	NCBP1	100	81.899	Bos_taurus
ENSSPUG00000008609	NCBP1	99	31.196	WBGene00018156	ncbp-1	99	30.826	Caenorhabditis_elegans
ENSSPUG00000008609	NCBP1	100	83.529	ENSCJAG00000010840	NCBP1	100	83.529	Callithrix_jacchus
ENSSPUG00000008609	NCBP1	100	82.152	ENSCAFG00000002445	NCBP1	100	82.152	Canis_familiaris
ENSSPUG00000008609	NCBP1	99	82.005	ENSCAFG00020017997	NCBP1	100	81.259	Canis_lupus_dingo
ENSSPUG00000008609	NCBP1	100	81.646	ENSCHIG00000020139	NCBP1	100	81.646	Capra_hircus
ENSSPUG00000008609	NCBP1	51	74.696	ENSTSYG00000011914	NCBP1	97	74.696	Carlito_syrichta
ENSSPUG00000008609	NCBP1	80	70.625	ENSCAPG00000014252	NCBP1	90	70.625	Cavia_aperea
ENSSPUG00000008609	NCBP1	95	81.673	ENSCPOG00000012573	NCBP1	99	81.673	Cavia_porcellus
ENSSPUG00000008609	NCBP1	100	82.152	ENSCCAG00000032297	NCBP1	100	82.152	Cebus_capucinus
ENSSPUG00000008609	NCBP1	100	82.152	ENSCATG00000010052	NCBP1	100	82.152	Cercocebus_atys
ENSSPUG00000008609	NCBP1	100	82.278	ENSCLAG00000014339	NCBP1	100	82.278	Chinchilla_lanigera
ENSSPUG00000008609	NCBP1	100	82.152	ENSCSAG00000010929	NCBP1	100	82.152	Chlorocebus_sabaeus
ENSSPUG00000008609	NCBP1	90	91.589	ENSCHOG00000010332	NCBP1	90	91.589	Choloepus_hoffmanni
ENSSPUG00000008609	NCBP1	100	81.761	ENSCPBG00000024344	NCBP1	99	84.986	Chrysemys_picta_bellii
ENSSPUG00000008609	NCBP1	99	49.619	ENSCING00000008990	-	99	49.619	Ciona_intestinalis
ENSSPUG00000008609	NCBP1	99	48.741	ENSCSAVG00000005300	-	99	54.974	Ciona_savignyi
ENSSPUG00000008609	NCBP1	100	82.152	ENSCANG00000036913	NCBP1	100	82.152	Colobus_angolensis_palliatus
ENSSPUG00000008609	NCBP1	100	81.519	ENSCGRG00001015771	Ncbp1	100	81.519	Cricetulus_griseus_chok1gshd
ENSSPUG00000008609	NCBP1	99	81.491	ENSCGRG00000010311	Ncbp1	100	81.282	Cricetulus_griseus_crigri
ENSSPUG00000008609	NCBP1	99	78.212	ENSCSEG00000012377	NCBP1	99	77.834	Cynoglossus_semilaevis
ENSSPUG00000008609	NCBP1	99	76.101	ENSCVAG00000008795	NCBP1	99	76.478	Cyprinodon_variegatus
ENSSPUG00000008609	NCBP1	100	81.772	ENSDNOG00000006885	NCBP1	100	81.772	Dasypus_novemcinctus
ENSSPUG00000008609	NCBP1	100	77.960	ENSDORG00000013652	Ncbp1	100	77.960	Dipodomys_ordii
ENSSPUG00000008609	NCBP1	83	30.690	FBgn0038887	CG7907	87	30.588	Drosophila_melanogaster
ENSSPUG00000008609	NCBP1	100	51.429	FBgn0022942	Cbp80	100	51.875	Drosophila_melanogaster
ENSSPUG00000008609	NCBP1	91	85.808	ENSETEG00000009705	NCBP1	88	85.808	Echinops_telfairi
ENSSPUG00000008609	NCBP1	100	68.467	ENSEBUG00000008386	NCBP1	100	68.090	Eptatretus_burgeri
ENSSPUG00000008609	NCBP1	100	81.646	ENSEASG00005022795	NCBP1	100	81.646	Equus_asinus_asinus
ENSSPUG00000008609	NCBP1	100	81.772	ENSECAG00000013847	NCBP1	100	81.772	Equus_caballus
ENSSPUG00000008609	NCBP1	95	77.200	ENSEEUG00000015973	NCBP1	99	77.067	Erinaceus_europaeus
ENSSPUG00000008609	NCBP1	99	75.975	ENSELUG00000022519	NCBP1	99	76.478	Esox_lucius
ENSSPUG00000008609	NCBP1	100	82.256	ENSFCAG00000001206	NCBP1	100	82.256	Felis_catus
ENSSPUG00000008609	NCBP1	99	85.751	ENSFALG00000001193	NCBP1	100	85.878	Ficedula_albicollis
ENSSPUG00000008609	NCBP1	100	82.152	ENSFDAG00000010864	NCBP1	100	82.152	Fukomys_damarensis
ENSSPUG00000008609	NCBP1	99	77.107	ENSFHEG00000000655	NCBP1	99	76.855	Fundulus_heteroclitus
ENSSPUG00000008609	NCBP1	99	75.094	ENSGMOG00000008653	NCBP1	99	74.717	Gadus_morhua
ENSSPUG00000008609	NCBP1	99	86.778	ENSGALG00000002087	NCBP1	100	86.507	Gallus_gallus
ENSSPUG00000008609	NCBP1	99	77.186	ENSGAFG00000017787	NCBP1	99	77.107	Gambusia_affinis
ENSSPUG00000008609	NCBP1	99	76.035	ENSGACG00000016772	NCBP1	98	75.910	Gasterosteus_aculeatus
ENSSPUG00000008609	NCBP1	100	85.409	ENSGAGG00000019483	NCBP1	98	86.462	Gopherus_agassizii
ENSSPUG00000008609	NCBP1	100	82.152	ENSGGOG00000001376	NCBP1	100	82.152	Gorilla_gorilla
ENSSPUG00000008609	NCBP1	99	77.960	ENSHBUG00000020843	NCBP1	99	77.960	Haplochromis_burtoni
ENSSPUG00000008609	NCBP1	100	82.152	ENSHGLG00000001882	NCBP1	100	82.152	Heterocephalus_glaber_female
ENSSPUG00000008609	NCBP1	100	70.996	ENSHGLG00000018112	-	100	70.996	Heterocephalus_glaber_female
ENSSPUG00000008609	NCBP1	100	82.152	ENSHGLG00100013014	NCBP1	100	82.152	Heterocephalus_glaber_male
ENSSPUG00000008609	NCBP1	100	70.744	ENSHGLG00100017373	-	100	70.744	Heterocephalus_glaber_male
ENSSPUG00000008609	NCBP1	76	68.272	ENSHCOG00000000204	NCBP1	91	68.272	Hippocampus_comes
ENSSPUG00000008609	NCBP1	99	77.387	ENSIPUG00000007275	ncbp1	99	77.261	Ictalurus_punctatus
ENSSPUG00000008609	NCBP1	100	82.152	ENSSTOG00000002695	NCBP1	100	82.152	Ictidomys_tridecemlineatus
ENSSPUG00000008609	NCBP1	99	77.204	ENSKMAG00000003594	NCBP1	99	77.347	Kryptolebias_marmoratus
ENSSPUG00000008609	NCBP1	99	76.273	ENSLBEG00000011661	NCBP1	99	76.149	Labrus_bergylta
ENSSPUG00000008609	NCBP1	100	73.267	ENSLACG00000013955	NCBP1	100	73.639	Latimeria_chalumnae
ENSSPUG00000008609	NCBP1	99	71.820	ENSLOCG00000009579	NCBP1	99	71.820	Lepisosteus_oculatus
ENSSPUG00000008609	NCBP1	100	82.152	ENSLAFG00000005999	NCBP1	100	82.152	Loxodonta_africana
ENSSPUG00000008609	NCBP1	100	82.152	ENSMFAG00000030994	NCBP1	100	82.152	Macaca_fascicularis
ENSSPUG00000008609	NCBP1	99	81.818	ENSMMUG00000012281	NCBP1	99	81.818	Macaca_mulatta
ENSSPUG00000008609	NCBP1	100	82.152	ENSMNEG00000042790	NCBP1	100	82.152	Macaca_nemestrina
ENSSPUG00000008609	NCBP1	100	82.152	ENSMLEG00000030374	NCBP1	100	82.152	Mandrillus_leucophaeus
ENSSPUG00000008609	NCBP1	99	78.086	ENSMAMG00000014806	NCBP1	99	77.834	Mastacembelus_armatus
ENSSPUG00000008609	NCBP1	97	77.214	ENSMZEG00005009290	-	99	77.243	Maylandia_zebra
ENSSPUG00000008609	NCBP1	99	77.960	ENSMZEG00005003469	NCBP1	99	77.960	Maylandia_zebra
ENSSPUG00000008609	NCBP1	99	81.146	ENSMAUG00000020583	Ncbp1	99	81.146	Mesocricetus_auratus
ENSSPUG00000008609	NCBP1	100	82.025	ENSMICG00000012682	NCBP1	100	82.025	Microcebus_murinus
ENSSPUG00000008609	NCBP1	100	81.163	ENSMOCG00000015818	Ncbp1	100	81.266	Microtus_ochrogaster
ENSSPUG00000008609	NCBP1	90	75.524	ENSMMOG00000002610	NCBP1	99	75.559	Mola_mola
ENSSPUG00000008609	NCBP1	100	81.876	ENSMODG00000003202	NCBP1	99	81.622	Monodelphis_domestica
ENSSPUG00000008609	NCBP1	99	77.834	ENSMALG00000003547	NCBP1	99	77.708	Monopterus_albus
ENSSPUG00000008609	NCBP1	100	81.392	MGP_CAROLIEiJ_G0025982	Ncbp1	100	81.392	Mus_caroli
ENSSPUG00000008609	NCBP1	100	81.392	ENSMUSG00000028330	Ncbp1	100	81.392	Mus_musculus
ENSSPUG00000008609	NCBP1	100	81.646	MGP_PahariEiJ_G0028318	Ncbp1	100	81.646	Mus_pahari
ENSSPUG00000008609	NCBP1	100	81.392	MGP_SPRETEiJ_G0026945	Ncbp1	100	81.392	Mus_spretus
ENSSPUG00000008609	NCBP1	100	82.025	ENSMPUG00000006399	NCBP1	100	82.025	Mustela_putorius_furo
ENSSPUG00000008609	NCBP1	99	80.848	ENSMLUG00000015201	NCBP1	99	80.848	Myotis_lucifugus
ENSSPUG00000008609	NCBP1	100	81.392	ENSNGAG00000014101	Ncbp1	100	81.392	Nannospalax_galili
ENSSPUG00000008609	NCBP1	80	89.474	ENSNBRG00000014674	NCBP1	98	89.474	Neolamprologus_brichardi
ENSSPUG00000008609	NCBP1	100	82.152	ENSNLEG00000016909	NCBP1	100	82.152	Nomascus_leucogenys
ENSSPUG00000008609	NCBP1	88	89.640	ENSMEUG00000010672	NCBP1	90	87.387	Notamacropus_eugenii
ENSSPUG00000008609	NCBP1	84	73.390	ENSOPRG00000002144	-	88	73.390	Ochotona_princeps
ENSSPUG00000008609	NCBP1	100	82.152	ENSODEG00000003232	NCBP1	100	82.152	Octodon_degus
ENSSPUG00000008609	NCBP1	99	77.834	ENSONIG00000001502	NCBP1	99	77.834	Oreochromis_niloticus
ENSSPUG00000008609	NCBP1	78	82.154	ENSOANG00000001918	NCBP1	99	82.154	Ornithorhynchus_anatinus
ENSSPUG00000008609	NCBP1	98	81.677	ENSOCUG00000013853	NCBP1	97	81.677	Oryctolagus_cuniculus
ENSSPUG00000008609	NCBP1	99	75.564	ENSORLG00000011008	NCBP1	99	75.564	Oryzias_latipes
ENSSPUG00000008609	NCBP1	99	75.689	ENSORLG00020017455	NCBP1	99	75.689	Oryzias_latipes_hni
ENSSPUG00000008609	NCBP1	99	75.689	ENSORLG00015012127	NCBP1	99	75.689	Oryzias_latipes_hsok
ENSSPUG00000008609	NCBP1	99	76.817	ENSOMEG00000020698	NCBP1	99	76.692	Oryzias_melastigma
ENSSPUG00000008609	NCBP1	100	82.071	ENSOGAG00000013888	NCBP1	100	82.071	Otolemur_garnettii
ENSSPUG00000008609	NCBP1	100	81.646	ENSOARG00000011233	NCBP1	100	81.646	Ovis_aries
ENSSPUG00000008609	NCBP1	100	82.152	ENSPPAG00000026462	NCBP1	100	82.152	Pan_paniscus
ENSSPUG00000008609	NCBP1	100	82.152	ENSPPRG00000022574	NCBP1	100	82.152	Panthera_pardus
ENSSPUG00000008609	NCBP1	100	82.152	ENSPTIG00000018507	NCBP1	100	82.152	Panthera_tigris_altaica
ENSSPUG00000008609	NCBP1	100	82.152	ENSPTRG00000021167	NCBP1	100	82.152	Pan_troglodytes
ENSSPUG00000008609	NCBP1	100	82.152	ENSPANG00000025591	NCBP1	100	82.152	Papio_anubis
ENSSPUG00000008609	NCBP1	100	74.843	ENSPKIG00000015861	NCBP1	100	74.591	Paramormyrops_kingsleyae
ENSSPUG00000008609	NCBP1	64	92.958	ENSPSIG00000009558	NCBP1	97	93.159	Pelodiscus_sinensis
ENSSPUG00000008609	NCBP1	99	73.552	ENSPMGG00000020476	NCBP1	99	73.174	Periophthalmus_magnuspinnatus
ENSSPUG00000008609	NCBP1	100	81.013	ENSPEMG00000020105	Ncbp1	100	81.013	Peromyscus_maniculatus_bairdii
ENSSPUG00000008609	NCBP1	100	60.000	ENSPMAG00000005533	NCBP1	100	61.076	Petromyzon_marinus
ENSSPUG00000008609	NCBP1	100	82.853	ENSPCIG00000015800	NCBP1	99	82.592	Phascolarctos_cinereus
ENSSPUG00000008609	NCBP1	99	77.068	ENSPFOG00000004158	NCBP1	99	76.942	Poecilia_formosa
ENSSPUG00000008609	NCBP1	99	77.358	ENSPLAG00000020002	NCBP1	99	77.358	Poecilia_latipinna
ENSSPUG00000008609	NCBP1	99	77.358	ENSPMEG00000019821	NCBP1	99	77.358	Poecilia_mexicana
ENSSPUG00000008609	NCBP1	99	77.387	ENSPREG00000006035	NCBP1	99	77.261	Poecilia_reticulata
ENSSPUG00000008609	NCBP1	100	82.152	ENSPPYG00000019426	NCBP1	100	82.152	Pongo_abelii
ENSSPUG00000008609	NCBP1	89	80.688	ENSPCAG00000009943	NCBP1	90	80.688	Procavia_capensis
ENSSPUG00000008609	NCBP1	90	83.188	ENSPCOG00000020024	NCBP1	98	83.188	Propithecus_coquereli
ENSSPUG00000008609	NCBP1	100	81.772	ENSPVAG00000005924	NCBP1	100	81.772	Pteropus_vampyrus
ENSSPUG00000008609	NCBP1	90	76.257	ENSPNYG00000002140	NCBP1	99	76.290	Pundamilia_nyererei
ENSSPUG00000008609	NCBP1	99	77.541	ENSPNAG00000027753	NCBP1	99	77.415	Pygocentrus_nattereri
ENSSPUG00000008609	NCBP1	100	81.519	ENSRNOG00000023605	Ncbp1	100	81.519	Rattus_norvegicus
ENSSPUG00000008609	NCBP1	100	82.152	ENSRBIG00000043175	NCBP1	100	82.152	Rhinopithecus_bieti
ENSSPUG00000008609	NCBP1	100	82.152	ENSRROG00000029767	NCBP1	100	82.152	Rhinopithecus_roxellana
ENSSPUG00000008609	NCBP1	100	82.152	ENSSBOG00000019378	NCBP1	100	82.152	Saimiri_boliviensis_boliviensis
ENSSPUG00000008609	NCBP1	64	89.535	ENSSHAG00000015882	NCBP1	66	89.062	Sarcophilus_harrisii
ENSSPUG00000008609	NCBP1	99	76.508	ENSSFOG00015001872	NCBP1	100	76.076	Scleropages_formosus
ENSSPUG00000008609	NCBP1	99	76.700	ENSSMAG00000007463	NCBP1	99	76.574	Scophthalmus_maximus
ENSSPUG00000008609	NCBP1	99	78.074	ENSSDUG00000007019	NCBP1	100	77.366	Seriola_dumerili
ENSSPUG00000008609	NCBP1	99	77.834	ENSSLDG00000021924	NCBP1	99	77.834	Seriola_lalandi_dorsalis
ENSSPUG00000008609	NCBP1	88	81.004	ENSSARG00000007274	NCBP1	87	81.004	Sorex_araneus
ENSSPUG00000008609	NCBP1	99	78.212	ENSSPAG00000012550	NCBP1	99	78.212	Stegastes_partitus
ENSSPUG00000008609	NCBP1	100	82.152	ENSSSCG00000005366	NCBP1	100	82.152	Sus_scrofa
ENSSPUG00000008609	NCBP1	100	84.720	ENSTGUG00000001472	NCBP1	100	84.969	Taeniopygia_guttata
ENSSPUG00000008609	NCBP1	99	76.826	ENSTRUG00000005287	NCBP1	99	76.826	Takifugu_rubripes
ENSSPUG00000008609	NCBP1	100	78.861	ENSTBEG00000004035	NCBP1	100	78.861	Tupaia_belangeri
ENSSPUG00000008609	NCBP1	91	89.206	ENSTTRG00000000507	NCBP1	88	89.206	Tursiops_truncatus
ENSSPUG00000008609	NCBP1	100	82.025	ENSUAMG00000005471	NCBP1	100	82.025	Ursus_americanus
ENSSPUG00000008609	NCBP1	97	79.714	ENSUMAG00000011865	NCBP1	100	81.259	Ursus_maritimus
ENSSPUG00000008609	NCBP1	100	78.228	ENSVPAG00000010537	NCBP1	100	78.228	Vicugna_pacos
ENSSPUG00000008609	NCBP1	100	82.152	ENSVVUG00000019725	NCBP1	100	82.152	Vulpes_vulpes
ENSSPUG00000008609	NCBP1	100	77.370	ENSXETG00000010179	ncbp1	100	77.244	Xenopus_tropicalis
ENSSPUG00000008609	NCBP1	99	77.107	ENSXMAG00000018253	NCBP1	99	77.107	Xiphophorus_maculatus