EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000008707 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 9723 bases
Position: chrQEPC01015106.1:392222-401944
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011372	Gar1	PF04410.14	5.1e-39	1	1
ENSSPUP00000011362	Gar1	PF04410.14	8.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012107	GAR1-201	648	-	ENSSPUP00000011362	215 (aa)	-	-
ENSSPUT00000012117	GAR1-202	679	-	ENSSPUP00000011372	179 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008707	GAR1	59	94.340	ENSAPOG00000019754	gar1	68	80.690	Acanthochromis_polyacanthus
ENSSPUG00000008707	GAR1	61	90.826	ENSAMEG00000004605	GAR1	52	92.453	Ailuropoda_melanoleuca
ENSSPUG00000008707	GAR1	59	94.340	ENSAOCG00000020947	gar1	50	94.340	Amphiprion_ocellaris
ENSSPUG00000008707	GAR1	59	94.340	ENSAPEG00000001676	gar1	50	94.340	Amphiprion_percula
ENSSPUG00000008707	GAR1	59	94.340	ENSATEG00000003733	gar1	50	94.340	Anabas_testudineus
ENSSPUG00000008707	GAR1	60	90.654	ENSAPLG00000010926	GAR1	59	90.654	Anas_platyrhynchos
ENSSPUG00000008707	GAR1	60	94.393	ENSACAG00000010031	GAR1	50	94.393	Anolis_carolinensis
ENSSPUG00000008707	GAR1	61	91.818	ENSACLG00000010029	gar1	54	86.719	Astatotilapia_calliptera
ENSSPUG00000008707	GAR1	61	87.273	ENSAMXG00000015752	gar1	75	79.856	Astyanax_mexicanus
ENSSPUG00000008707	GAR1	61	91.743	ENSBTAG00000000748	GAR1	50	93.396	Bos_taurus
ENSSPUG00000008707	GAR1	55	60.606	WBGene00022046	Y66H1A.4	61	56.250	Caenorhabditis_elegans
ENSSPUG00000008707	GAR1	59	91.509	ENSCAFG00020015566	GAR1	55	93.396	Canis_lupus_dingo
ENSSPUG00000008707	GAR1	61	91.818	ENSCHIG00000016026	-	51	93.396	Capra_hircus
ENSSPUG00000008707	GAR1	55	84.694	ENSCHIG00000011049	-	53	80.189	Capra_hircus
ENSSPUG00000008707	GAR1	61	91.743	ENSTSYG00000013668	-	50	93.396	Carlito_syrichta
ENSSPUG00000008707	GAR1	61	83.486	ENSTSYG00000026632	-	54	84.906	Carlito_syrichta
ENSSPUG00000008707	GAR1	61	91.818	ENSCATG00000021854	GAR1	54	93.396	Cercocebus_atys
ENSSPUG00000008707	GAR1	61	90.909	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSSPUG00000008707	GAR1	60	91.589	ENSCSAG00000003922	GAR1	54	93.396	Chlorocebus_sabaeus
ENSSPUG00000008707	GAR1	58	91.262	ENSCHOG00000012404	-	60	78.676	Choloepus_hoffmanni
ENSSPUG00000008707	GAR1	73	90.840	ENSCPBG00000004310	GAR1	64	90.840	Chrysemys_picta_bellii
ENSSPUG00000008707	GAR1	55	71.429	ENSCING00000005744	-	51	68.932	Ciona_intestinalis
ENSSPUG00000008707	GAR1	54	70.833	ENSCSAVG00000006355	-	50	70.000	Ciona_savignyi
ENSSPUG00000008707	GAR1	51	96.739	ENSCGRG00000010165	-	72	96.739	Cricetulus_griseus_crigri
ENSSPUG00000008707	GAR1	59	93.396	ENSCVAG00000002103	gar1	51	93.396	Cyprinodon_variegatus
ENSSPUG00000008707	GAR1	69	86.992	ENSDARG00000076526	gar1	68	77.922	Danio_rerio
ENSSPUG00000008707	GAR1	61	90.826	ENSDNOG00000037632	GAR1	54	92.453	Dasypus_novemcinctus
ENSSPUG00000008707	GAR1	55	82.828	ENSEBUG00000011178	gar1	70	67.097	Eptatretus_burgeri
ENSSPUG00000008707	GAR1	61	91.818	ENSECAG00000013624	GAR1	54	93.396	Equus_caballus
ENSSPUG00000008707	GAR1	58	92.233	ENSELUG00000021108	gar1	65	76.389	Esox_lucius
ENSSPUG00000008707	GAR1	91	51.799	ENSFCAG00000025841	-	77	54.331	Felis_catus
ENSSPUG00000008707	GAR1	61	91.743	ENSFCAG00000040791	-	51	93.396	Felis_catus
ENSSPUG00000008707	GAR1	62	90.991	ENSFHEG00000008068	gar1	50	92.453	Fundulus_heteroclitus
ENSSPUG00000008707	GAR1	59	89.623	ENSGMOG00000012419	gar1	76	82.540	Gadus_morhua
ENSSPUG00000008707	GAR1	73	87.786	ENSGAGG00000004393	GAR1	65	90.076	Gopherus_agassizii
ENSSPUG00000008707	GAR1	62	72.973	ENSGGOG00000036205	-	53	74.528	Gorilla_gorilla
ENSSPUG00000008707	GAR1	54	96.875	ENSHBUG00000023860	gar1	68	84.211	Haplochromis_burtoni
ENSSPUG00000008707	GAR1	59	94.340	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSSPUG00000008707	GAR1	59	91.509	ENSHCOG00000008656	gar1	69	78.146	Hippocampus_comes
ENSSPUG00000008707	GAR1	61	90.909	ENSIPUG00000003194	gar1	62	84.733	Ictalurus_punctatus
ENSSPUG00000008707	GAR1	61	89.908	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSSPUG00000008707	GAR1	62	89.189	ENSKMAG00000010402	gar1	61	83.721	Kryptolebias_marmoratus
ENSSPUG00000008707	GAR1	59	93.396	ENSLBEG00000015647	gar1	53	79.310	Labrus_bergylta
ENSSPUG00000008707	GAR1	62	90.090	ENSLACG00000003306	GAR1	67	87.500	Latimeria_chalumnae
ENSSPUG00000008707	GAR1	59	94.340	ENSLOCG00000011711	GAR1	76	86.111	Lepisosteus_oculatus
ENSSPUG00000008707	GAR1	69	78.862	ENSMFAG00000003572	-	61	77.236	Macaca_fascicularis
ENSSPUG00000008707	GAR1	61	92.661	ENSMAMG00000017583	gar1	63	80.822	Mastacembelus_armatus
ENSSPUG00000008707	GAR1	59	95.283	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSSPUG00000008707	GAR1	59	94.340	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSSPUG00000008707	GAR1	59	92.453	ENSMMOG00000004156	gar1	52	92.453	Mola_mola
ENSSPUG00000008707	GAR1	59	94.340	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSSPUG00000008707	GAR1	61	91.818	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSSPUG00000008707	GAR1	61	91.818	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSSPUG00000008707	GAR1	61	91.818	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSSPUG00000008707	GAR1	61	91.743	ENSMPUG00000008615	GAR1	51	93.396	Mustela_putorius_furo
ENSSPUG00000008707	GAR1	61	91.818	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSSPUG00000008707	GAR1	59	93.396	ENSNBRG00000014828	gar1	63	82.517	Neolamprologus_brichardi
ENSSPUG00000008707	GAR1	62	76.577	ENSNLEG00000034282	-	54	77.358	Nomascus_leucogenys
ENSSPUG00000008707	GAR1	59	92.453	ENSODEG00000011083	GAR1	62	84.298	Octodon_degus
ENSSPUG00000008707	GAR1	59	94.340	ENSONIG00000001085	gar1	70	79.487	Oreochromis_niloticus
ENSSPUG00000008707	GAR1	61	91.743	ENSOGAG00000004693	GAR1	50	93.396	Otolemur_garnettii
ENSSPUG00000008707	GAR1	61	91.743	ENSOARG00000004910	GAR1	57	85.124	Ovis_aries
ENSSPUG00000008707	GAR1	61	91.743	ENSPPAG00000014081	GAR1	53	93.396	Pan_paniscus
ENSSPUG00000008707	GAR1	61	91.743	ENSPPRG00000023697	GAR1	51	93.396	Panthera_pardus
ENSSPUG00000008707	GAR1	61	91.743	ENSPTIG00000021565	GAR1	51	93.396	Panthera_tigris_altaica
ENSSPUG00000008707	GAR1	61	91.818	ENSPTRG00000016364	GAR1	54	93.396	Pan_troglodytes
ENSSPUG00000008707	GAR1	85	63.399	ENSPTRG00000049340	-	50	76.415	Pan_troglodytes
ENSSPUG00000008707	GAR1	60	79.439	ENSPANG00000033062	-	50	77.236	Papio_anubis
ENSSPUG00000008707	GAR1	59	93.333	ENSPKIG00000018991	gar1	57	85.156	Paramormyrops_kingsleyae
ENSSPUG00000008707	GAR1	57	91.176	ENSPMGG00000022004	gar1	73	78.014	Periophthalmus_magnuspinnatus
ENSSPUG00000008707	GAR1	59	95.283	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSSPUG00000008707	GAR1	68	89.344	ENSPFOG00000024155	gar1	50	92.453	Poecilia_formosa
ENSSPUG00000008707	GAR1	68	89.344	ENSPLAG00000015056	gar1	50	92.453	Poecilia_latipinna
ENSSPUG00000008707	GAR1	68	90.164	ENSPMEG00000009320	gar1	51	93.396	Poecilia_mexicana
ENSSPUG00000008707	GAR1	60	91.589	ENSPCOG00000027049	GAR1	54	93.396	Propithecus_coquereli
ENSSPUG00000008707	GAR1	61	91.743	ENSPVAG00000005992	GAR1	55	78.788	Pteropus_vampyrus
ENSSPUG00000008707	GAR1	61	91.818	ENSPNYG00000020926	gar1	77	82.517	Pundamilia_nyererei
ENSSPUG00000008707	GAR1	61	90.000	ENSPNAG00000019686	gar1	58	75.000	Pygocentrus_nattereri
ENSSPUG00000008707	GAR1	60	95.327	ENSRNOG00000061146	Gar1	62	95.283	Rattus_norvegicus
ENSSPUG00000008707	GAR1	59	93.396	ENSRBIG00000019547	GAR1	54	93.396	Rhinopithecus_bieti
ENSSPUG00000008707	GAR1	63	75.893	ENSRBIG00000042411	-	60	74.797	Rhinopithecus_bieti
ENSSPUG00000008707	GAR1	72	75.000	ENSRROG00000044348	-	59	74.797	Rhinopithecus_roxellana
ENSSPUG00000008707	GAR1	61	91.818	ENSRROG00000028454	GAR1	54	93.396	Rhinopithecus_roxellana
ENSSPUG00000008707	GAR1	70	52.381	YHR089C	-	79	53.571	Saccharomyces_cerevisiae
ENSSPUG00000008707	GAR1	60	89.720	ENSSHAG00000002161	GAR1	58	76.471	Sarcophilus_harrisii
ENSSPUG00000008707	GAR1	59	91.509	ENSSFOG00015013198	gar1	62	82.734	Scleropages_formosus
ENSSPUG00000008707	GAR1	59	93.396	ENSSMAG00000009976	gar1	62	80.147	Scophthalmus_maximus
ENSSPUG00000008707	GAR1	59	93.396	ENSSDUG00000002130	gar1	54	86.047	Seriola_dumerili
ENSSPUG00000008707	GAR1	59	93.396	ENSSLDG00000023264	gar1	50	93.396	Seriola_lalandi_dorsalis
ENSSPUG00000008707	GAR1	59	94.340	ENSSPAG00000005974	gar1	63	81.250	Stegastes_partitus
ENSSPUG00000008707	GAR1	61	91.818	ENSSSCG00000009137	GAR1	52	93.396	Sus_scrofa
ENSSPUG00000008707	GAR1	55	91.919	ENSTGUG00000004185	GAR1	67	91.919	Taeniopygia_guttata
ENSSPUG00000008707	GAR1	59	90.566	ENSTRUG00000020580	gar1	51	90.566	Takifugu_rubripes
ENSSPUG00000008707	GAR1	58	93.204	ENSTNIG00000013023	gar1	60	93.396	Tetraodon_nigroviridis
ENSSPUG00000008707	GAR1	59	91.509	ENSUAMG00000005652	GAR1	55	93.396	Ursus_americanus
ENSSPUG00000008707	GAR1	61	91.743	ENSUMAG00000000776	GAR1	51	93.396	Ursus_maritimus
ENSSPUG00000008707	GAR1	61	91.743	ENSVPAG00000009844	GAR1	65	76.623	Vicugna_pacos
ENSSPUG00000008707	GAR1	61	91.743	ENSVVUG00000017612	GAR1	55	93.396	Vulpes_vulpes
ENSSPUG00000008707	GAR1	66	88.983	ENSXETG00000024114	gar1	59	78.295	Xenopus_tropicalis