EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000008917 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 266457 bases
Position: chrQEPC01007621.1:554627-821083
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011765	TUDOR	PF00567.24	1e-88	1	5
ENSSPUP00000011765	TUDOR	PF00567.24	1e-88	2	5
ENSSPUP00000011765	TUDOR	PF00567.24	1e-88	3	5
ENSSPUP00000011765	TUDOR	PF00567.24	1e-88	4	5
ENSSPUP00000011765	TUDOR	PF00567.24	1e-88	5	5
ENSSPUP00000011722	TUDOR	PF00567.24	2.2e-87	1	5
ENSSPUP00000011722	TUDOR	PF00567.24	2.2e-87	2	5
ENSSPUP00000011722	TUDOR	PF00567.24	2.2e-87	3	5
ENSSPUP00000011722	TUDOR	PF00567.24	2.2e-87	4	5
ENSSPUP00000011722	TUDOR	PF00567.24	2.2e-87	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012552	RNF17-202	4479	-	ENSSPUP00000011765	1492 (aa)	-	-
ENSSPUT00000012508	RNF17-201	4095	-	ENSSPUP00000011722	1364 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000008917	RNF17	79	32.203	ENSSPUG00000005015	TDRD1	73	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008917	RNF17	94	51.429	ENSG00000132972	RNF17	99	58.304	Homo_sapiens
ENSSPUG00000008917	RNF17	90	32.968	ENSAPOG00000017034	rnf17	92	32.967	Acanthochromis_polyacanthus
ENSSPUG00000008917	RNF17	94	57.056	ENSAMEG00000017340	RNF17	87	57.056	Ailuropoda_melanoleuca
ENSSPUG00000008917	RNF17	82	35.568	ENSAOCG00000018283	rnf17	74	36.766	Amphiprion_ocellaris
ENSSPUG00000008917	RNF17	90	32.851	ENSAPEG00000022338	rnf17	92	32.903	Amphiprion_percula
ENSSPUG00000008917	RNF17	77	37.237	ENSATEG00000002067	rnf17	96	33.719	Anabas_testudineus
ENSSPUG00000008917	RNF17	94	48.061	ENSAPLG00000003969	RNF17	99	48.286	Anas_platyrhynchos
ENSSPUG00000008917	RNF17	94	47.555	ENSACAG00000001418	RNF17	88	47.555	Anolis_carolinensis
ENSSPUG00000008917	RNF17	94	46.567	ENSANAG00000029969	RNF17	97	48.611	Aotus_nancymaae
ENSSPUG00000008917	RNF17	96	31.164	ENSACLG00000018279	rnf17	90	31.096	Astatotilapia_calliptera
ENSSPUG00000008917	RNF17	80	34.140	ENSAMXG00000011002	rnf17	84	35.128	Astyanax_mexicanus
ENSSPUG00000008917	RNF17	62	54.116	ENSBTAG00000000278	RNF17	98	54.116	Bos_taurus
ENSSPUG00000008917	RNF17	87	58.188	ENSCJAG00000018937	RNF17	98	54.294	Callithrix_jacchus
ENSSPUG00000008917	RNF17	93	58.204	ENSCAFG00000007418	RNF17	98	54.398	Canis_familiaris
ENSSPUG00000008917	RNF17	98	53.536	ENSCHIG00000026716	RNF17	99	53.536	Capra_hircus
ENSSPUG00000008917	RNF17	95	51.040	ENSTSYG00000000365	RNF17	98	52.576	Carlito_syrichta
ENSSPUG00000008917	RNF17	81	48.862	ENSCAPG00000012908	RNF17	88	49.369	Cavia_aperea
ENSSPUG00000008917	RNF17	94	51.079	ENSCCAG00000026725	RNF17	98	54.021	Cebus_capucinus
ENSSPUG00000008917	RNF17	98	52.277	ENSCATG00000040352	RNF17	98	55.115	Cercocebus_atys
ENSSPUG00000008917	RNF17	94	56.718	ENSCLAG00000004127	RNF17	87	56.718	Chinchilla_lanigera
ENSSPUG00000008917	RNF17	94	51.009	ENSCSAG00000018019	RNF17	87	51.009	Chlorocebus_sabaeus
ENSSPUG00000008917	RNF17	69	80.000	ENSCHOG00000013310	RNF17	61	80.000	Choloepus_hoffmanni
ENSSPUG00000008917	RNF17	94	58.223	ENSCPBG00000020920	RNF17	92	58.223	Chrysemys_picta_bellii
ENSSPUG00000008917	RNF17	96	56.578	ENSCANG00000032927	RNF17	98	54.962	Colobus_angolensis_palliatus
ENSSPUG00000008917	RNF17	92	56.930	ENSCGRG00001022658	Rnf17	85	56.930	Cricetulus_griseus_chok1gshd
ENSSPUG00000008917	RNF17	92	56.930	ENSCGRG00000009924	Rnf17	85	56.930	Cricetulus_griseus_crigri
ENSSPUG00000008917	RNF17	70	36.831	ENSCSEG00000008626	rnf17	76	36.831	Cynoglossus_semilaevis
ENSSPUG00000008917	RNF17	86	31.417	ENSCVAG00000017008	rnf17	93	31.417	Cyprinodon_variegatus
ENSSPUG00000008917	RNF17	94	31.541	ENSDARG00000056387	rnf17	88	31.541	Danio_rerio
ENSSPUG00000008917	RNF17	93	57.613	ENSDNOG00000006115	RNF17	87	57.613	Dasypus_novemcinctus
ENSSPUG00000008917	RNF17	56	52.736	ENSEASG00005001421	-	98	52.736	Equus_asinus_asinus
ENSSPUG00000008917	RNF17	95	52.672	ENSECAG00000017152	RNF17	86	58.193	Equus_caballus
ENSSPUG00000008917	RNF17	73	54.870	ENSEEUG00000000332	RNF17	69	54.870	Erinaceus_europaeus
ENSSPUG00000008917	RNF17	80	36.653	ENSELUG00000005626	rnf17	73	37.101	Esox_lucius
ENSSPUG00000008917	RNF17	92	58.846	ENSFCAG00000004914	RNF17	98	55.167	Felis_catus
ENSSPUG00000008917	RNF17	93	48.815	ENSFALG00000008766	RNF17	86	48.815	Ficedula_albicollis
ENSSPUG00000008917	RNF17	95	50.625	ENSFDAG00000017857	RNF17	87	50.625	Fukomys_damarensis
ENSSPUG00000008917	RNF17	81	36.182	ENSFHEG00000014822	rnf17	78	34.797	Fundulus_heteroclitus
ENSSPUG00000008917	RNF17	66	35.010	ENSGMOG00000015560	-	100	35.010	Gadus_morhua
ENSSPUG00000008917	RNF17	79	35.404	ENSGAFG00000004463	rnf17	88	35.330	Gambusia_affinis
ENSSPUG00000008917	RNF17	70	38.550	ENSGACG00000001340	-	100	38.550	Gasterosteus_aculeatus
ENSSPUG00000008917	RNF17	82	65.261	ENSGAGG00000016999	RNF17	78	65.261	Gopherus_agassizii
ENSSPUG00000008917	RNF17	96	53.248	ENSGGOG00000014491	RNF17	98	55.115	Gorilla_gorilla
ENSSPUG00000008917	RNF17	82	33.997	ENSHBUG00000003554	rnf17	76	33.633	Haplochromis_burtoni
ENSSPUG00000008917	RNF17	96	50.831	ENSHGLG00000007270	RNF17	87	50.831	Heterocephalus_glaber_female
ENSSPUG00000008917	RNF17	96	51.549	ENSHGLG00100017393	RNF17	86	52.624	Heterocephalus_glaber_male
ENSSPUG00000008917	RNF17	78	45.455	ENSHCOG00000017676	rnf17	90	45.455	Hippocampus_comes
ENSSPUG00000008917	RNF17	80	35.727	ENSIPUG00000001087	rnf17	78	35.727	Ictalurus_punctatus
ENSSPUG00000008917	RNF17	64	50.306	ENSSTOG00000011255	-	98	50.306	Ictidomys_tridecemlineatus
ENSSPUG00000008917	RNF17	93	56.475	ENSJJAG00000016584	Rnf17	86	56.475	Jaculus_jaculus
ENSSPUG00000008917	RNF17	80	34.370	ENSKMAG00000013403	rnf17	89	32.205	Kryptolebias_marmoratus
ENSSPUG00000008917	RNF17	87	33.333	ENSLBEG00000014910	rnf17	88	33.488	Labrus_bergylta
ENSSPUG00000008917	RNF17	68	52.959	ENSLACG00000000323	RNF17	83	53.293	Latimeria_chalumnae
ENSSPUG00000008917	RNF17	80	35.257	ENSLOCG00000010768	rnf17	73	35.257	Lepisosteus_oculatus
ENSSPUG00000008917	RNF17	98	52.469	ENSMFAG00000032388	RNF17	98	55.267	Macaca_fascicularis
ENSSPUG00000008917	RNF17	98	53.198	ENSMMUG00000014610	RNF17	98	55.420	Macaca_mulatta
ENSSPUG00000008917	RNF17	98	53.198	ENSMNEG00000011234	RNF17	98	55.420	Macaca_nemestrina
ENSSPUG00000008917	RNF17	98	52.205	ENSMLEG00000030227	RNF17	99	52.205	Mandrillus_leucophaeus
ENSSPUG00000008917	RNF17	80	35.379	ENSMAMG00000020403	rnf17	84	35.379	Mastacembelus_armatus
ENSSPUG00000008917	RNF17	96	31.301	ENSMZEG00005019166	rnf17	90	31.233	Maylandia_zebra
ENSSPUG00000008917	RNF17	82	50.558	ENSMGAG00000015138	RNF17	99	50.558	Meleagris_gallopavo
ENSSPUG00000008917	RNF17	95	55.080	ENSMAUG00000004788	Rnf17	88	55.080	Mesocricetus_auratus
ENSSPUG00000008917	RNF17	95	52.089	ENSMICG00000010364	RNF17	98	54.559	Microcebus_murinus
ENSSPUG00000008917	RNF17	69	53.676	ENSMOCG00000011818	-	98	55.838	Microtus_ochrogaster
ENSSPUG00000008917	RNF17	77	41.837	ENSMMOG00000019514	rnf17	78	41.837	Mola_mola
ENSSPUG00000008917	RNF17	95	61.257	ENSMODG00000007827	RNF17	89	61.257	Monodelphis_domestica
ENSSPUG00000008917	RNF17	74	36.067	ENSMALG00000016943	rnf17	90	32.980	Monopterus_albus
ENSSPUG00000008917	RNF17	93	55.743	MGP_CAROLIEiJ_G0019337	Rnf17	86	55.743	Mus_caroli
ENSSPUG00000008917	RNF17	95	51.389	ENSMUSG00000000365	Rnf17	87	51.389	Mus_musculus
ENSSPUG00000008917	RNF17	95	50.937	MGP_PahariEiJ_G0030355	Rnf17	87	50.937	Mus_pahari
ENSSPUG00000008917	RNF17	95	51.318	MGP_SPRETEiJ_G0020228	Rnf17	87	51.318	Mus_spretus
ENSSPUG00000008917	RNF17	94	57.686	ENSMPUG00000013305	RNF17	87	57.686	Mustela_putorius_furo
ENSSPUG00000008917	RNF17	97	51.701	ENSMLUG00000003903	RNF17	89	51.701	Myotis_lucifugus
ENSSPUG00000008917	RNF17	93	56.782	ENSNGAG00000013553	Rnf17	87	56.782	Nannospalax_galili
ENSSPUG00000008917	RNF17	79	35.493	ENSNBRG00000012006	rnf17	85	35.734	Neolamprologus_brichardi
ENSSPUG00000008917	RNF17	96	53.200	ENSNLEG00000013780	RNF17	98	54.908	Nomascus_leucogenys
ENSSPUG00000008917	RNF17	64	70.270	ENSMEUG00000003276	-	52	70.270	Notamacropus_eugenii
ENSSPUG00000008917	RNF17	71	58.621	ENSOPRG00000016743	-	62	58.621	Ochotona_princeps
ENSSPUG00000008917	RNF17	56	48.018	ENSODEG00000005443	-	98	48.018	Octodon_degus
ENSSPUG00000008917	RNF17	82	33.862	ENSONIG00000015746	rnf17	99	33.645	Oreochromis_niloticus
ENSSPUG00000008917	RNF17	95	52.544	ENSOCUG00000007384	RNF17	87	52.716	Oryctolagus_cuniculus
ENSSPUG00000008917	RNF17	92	32.411	ENSORLG00000012818	rnf17	99	32.798	Oryzias_latipes
ENSSPUG00000008917	RNF17	92	32.653	ENSORLG00020009879	-	88	33.041	Oryzias_latipes_hni
ENSSPUG00000008917	RNF17	90	32.444	ENSORLG00015013027	-	87	32.937	Oryzias_latipes_hsok
ENSSPUG00000008917	RNF17	75	34.311	ENSOMEG00000009891	rnf17	87	34.489	Oryzias_melastigma
ENSSPUG00000008917	RNF17	94	56.740	ENSOGAG00000014803	RNF17	87	56.816	Otolemur_garnettii
ENSSPUG00000008917	RNF17	96	56.181	ENSOARG00000014641	RNF17	92	56.181	Ovis_aries
ENSSPUG00000008917	RNF17	96	53.588	ENSPPAG00000028779	RNF17	98	55.675	Pan_paniscus
ENSSPUG00000008917	RNF17	92	58.846	ENSPPRG00000009230	RNF17	98	55.167	Panthera_pardus
ENSSPUG00000008917	RNF17	92	58.846	ENSPTIG00000001738	RNF17	98	55.015	Panthera_tigris_altaica
ENSSPUG00000008917	RNF17	96	53.655	ENSPTRG00000005713	RNF17	98	55.828	Pan_troglodytes
ENSSPUG00000008917	RNF17	98	52.937	ENSPANG00000007640	RNF17	98	54.962	Papio_anubis
ENSSPUG00000008917	RNF17	81	37.145	ENSPKIG00000001648	rnf17	91	37.145	Paramormyrops_kingsleyae
ENSSPUG00000008917	RNF17	79	66.052	ENSPSIG00000011245	RNF17	98	66.165	Pelodiscus_sinensis
ENSSPUG00000008917	RNF17	94	56.432	ENSPEMG00000008693	Rnf17	88	56.432	Peromyscus_maniculatus_bairdii
ENSSPUG00000008917	RNF17	66	63.003	ENSPCIG00000009190	-	94	63.003	Phascolarctos_cinereus
ENSSPUG00000008917	RNF17	90	37.913	ENSPFOG00000007124	rnf17	85	32.946	Poecilia_formosa
ENSSPUG00000008917	RNF17	90	33.162	ENSPLAG00000006198	rnf17	85	33.382	Poecilia_latipinna
ENSSPUG00000008917	RNF17	90	32.769	ENSPMEG00000022432	rnf17	93	32.523	Poecilia_mexicana
ENSSPUG00000008917	RNF17	79	36.364	ENSPREG00000001414	rnf17	80	36.511	Poecilia_reticulata
ENSSPUG00000008917	RNF17	94	56.849	ENSPPYG00000005215	RNF17	87	56.849	Pongo_abelii
ENSSPUG00000008917	RNF17	59	61.111	ENSPCAG00000002665	RNF17	58	58.046	Procavia_capensis
ENSSPUG00000008917	RNF17	84	39.058	ENSPCOG00000020211	RNF17	97	35.294	Propithecus_coquereli
ENSSPUG00000008917	RNF17	91	66.142	ENSPVAG00000013021	RNF17	79	66.142	Pteropus_vampyrus
ENSSPUG00000008917	RNF17	81	36.137	ENSPNAG00000027505	rnf17	84	36.066	Pygocentrus_nattereri
ENSSPUG00000008917	RNF17	95	51.597	ENSRNOG00000008059	Rnf17	87	51.597	Rattus_norvegicus
ENSSPUG00000008917	RNF17	98	51.643	ENSRBIG00000027010	RNF17	99	51.774	Rhinopithecus_bieti
ENSSPUG00000008917	RNF17	98	52.443	ENSRROG00000022801	RNF17	98	55.115	Rhinopithecus_roxellana
ENSSPUG00000008917	RNF17	94	55.817	ENSSBOG00000021661	RNF17	98	54.711	Saimiri_boliviensis_boliviensis
ENSSPUG00000008917	RNF17	97	60.489	ENSSHAG00000005609	RNF17	90	60.489	Sarcophilus_harrisii
ENSSPUG00000008917	RNF17	79	37.171	ENSSFOG00015023037	rnf17	89	35.726	Scleropages_formosus
ENSSPUG00000008917	RNF17	86	31.140	ENSSMAG00000007429	rnf17	87	31.140	Scophthalmus_maximus
ENSSPUG00000008917	RNF17	91	32.197	ENSSDUG00000013530	rnf17	96	32.393	Seriola_dumerili
ENSSPUG00000008917	RNF17	91	32.349	ENSSLDG00000019577	rnf17	94	32.662	Seriola_lalandi_dorsalis
ENSSPUG00000008917	RNF17	86	61.783	ENSSARG00000003016	RNF17	72	61.783	Sorex_araneus
ENSSPUG00000008917	RNF17	75	35.788	ENSSPAG00000001925	rnf17	90	32.629	Stegastes_partitus
ENSSPUG00000008917	RNF17	95	55.141	ENSSSCG00000009572	RNF17	98	51.417	Sus_scrofa
ENSSPUG00000008917	RNF17	66	55.942	ENSTGUG00000011267	-	100	56.232	Taeniopygia_guttata
ENSSPUG00000008917	RNF17	90	31.157	ENSTRUG00000015498	rnf17	85	31.157	Takifugu_rubripes
ENSSPUG00000008917	RNF17	78	32.838	ENSTNIG00000015681	rnf17	99	32.838	Tetraodon_nigroviridis
ENSSPUG00000008917	RNF17	87	79.032	ENSTBEG00000000282	RNF17	77	79.032	Tupaia_belangeri
ENSSPUG00000008917	RNF17	95	51.974	ENSTTRG00000012698	RNF17	81	56.869	Tursiops_truncatus
ENSSPUG00000008917	RNF17	78	64.789	ENSVPAG00000011388	RNF17	73	64.789	Vicugna_pacos
ENSSPUG00000008917	RNF17	94	57.763	ENSVVUG00000006226	RNF17	87	59.304	Vulpes_vulpes
ENSSPUG00000008917	RNF17	77	40.313	ENSXETG00000034020	RNF17	99	43.564	Xenopus_tropicalis
ENSSPUG00000008917	RNF17	91	33.065	ENSXCOG00000018295	rnf17	96	32.991	Xiphophorus_couchianus
ENSSPUG00000008917	RNF17	89	33.308	ENSXMAG00000014747	rnf17	93	33.308	Xiphophorus_maculatus