EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000008988 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 12274 bases
Position: chrQEPC01011341.1:10142694-10154967
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011711	tRNA_int_end_N2	PF12928.7	8.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012496	TSEN54-201	1351	-	ENSSPUP00000011711	431 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000008988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000008988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000008988	TSEN54	100	50.000	ENSG00000182173	TSEN54	96	70.073	Homo_sapiens
ENSSPUG00000008988	TSEN54	96	42.431	ENSAPOG00000009659	tsen54	78	42.890	Acanthochromis_polyacanthus
ENSSPUG00000008988	TSEN54	99	51.481	ENSAMEG00000009414	TSEN54	79	52.830	Ailuropoda_melanoleuca
ENSSPUG00000008988	TSEN54	96	43.925	ENSAOCG00000000152	tsen54	78	43.925	Amphiprion_ocellaris
ENSSPUG00000008988	TSEN54	96	43.224	ENSAPEG00000018931	tsen54	77	43.692	Amphiprion_percula
ENSSPUG00000008988	TSEN54	96	40.766	ENSATEG00000019860	tsen54	80	40.950	Anabas_testudineus
ENSSPUG00000008988	TSEN54	83	56.640	ENSAPLG00000009419	TSEN54	80	56.640	Anas_platyrhynchos
ENSSPUG00000008988	TSEN54	99	57.631	ENSACAG00000006714	TSEN54	80	58.451	Anolis_carolinensis
ENSSPUG00000008988	TSEN54	97	49.885	ENSANAG00000024061	TSEN54	78	52.246	Aotus_nancymaae
ENSSPUG00000008988	TSEN54	98	42.597	ENSACLG00000019800	tsen54	79	43.155	Astatotilapia_calliptera
ENSSPUG00000008988	TSEN54	96	42.991	ENSAMXG00000006546	tsen54	79	43.852	Astyanax_mexicanus
ENSSPUG00000008988	TSEN54	97	53.704	ENSBTAG00000000824	TSEN54	80	53.721	Bos_taurus
ENSSPUG00000008988	TSEN54	97	50.350	ENSCJAG00000014278	TSEN54	78	52.482	Callithrix_jacchus
ENSSPUG00000008988	TSEN54	97	51.936	ENSCAFG00000004798	TSEN54	79	52.887	Canis_familiaris
ENSSPUG00000008988	TSEN54	97	51.936	ENSCAFG00020000312	TSEN54	79	52.887	Canis_lupus_dingo
ENSSPUG00000008988	TSEN54	97	52.900	ENSCHIG00000019908	TSEN54	79	52.914	Capra_hircus
ENSSPUG00000008988	TSEN54	83	47.453	ENSTSYG00000037439	TSEN54	80	48.257	Carlito_syrichta
ENSSPUG00000008988	TSEN54	97	50.346	ENSCCAG00000036624	TSEN54	78	52.246	Cebus_capucinus
ENSSPUG00000008988	TSEN54	97	51.282	ENSCATG00000042877	TSEN54	78	52.482	Cercocebus_atys
ENSSPUG00000008988	TSEN54	97	52.103	ENSCLAG00000002924	TSEN54	86	52.113	Chinchilla_lanigera
ENSSPUG00000008988	TSEN54	100	50.000	ENSCSAG00000004809	TSEN54	83	51.351	Chlorocebus_sabaeus
ENSSPUG00000008988	TSEN54	97	65.977	ENSCPBG00000028071	TSEN54	81	66.279	Chrysemys_picta_bellii
ENSSPUG00000008988	TSEN54	100	50.225	ENSCANG00000028053	TSEN54	73	63.235	Colobus_angolensis_palliatus
ENSSPUG00000008988	TSEN54	100	50.676	ENSCGRG00001020029	Tsen54	89	50.676	Cricetulus_griseus_chok1gshd
ENSSPUG00000008988	TSEN54	81	47.778	ENSCGRG00000016289	Tsen54	87	47.778	Cricetulus_griseus_crigri
ENSSPUG00000008988	TSEN54	77	34.694	ENSCSEG00000020586	tsen54	79	34.694	Cynoglossus_semilaevis
ENSSPUG00000008988	TSEN54	76	40.176	ENSDARG00000036844	tsen54	78	42.105	Danio_rerio
ENSSPUG00000008988	TSEN54	100	49.889	ENSDNOG00000018452	TSEN54	83	50.552	Dasypus_novemcinctus
ENSSPUG00000008988	TSEN54	100	49.661	ENSDORG00000004073	Tsen54	86	50.234	Dipodomys_ordii
ENSSPUG00000008988	TSEN54	93	35.116	ENSEBUG00000005203	TSEN54	77	35.116	Eptatretus_burgeri
ENSSPUG00000008988	TSEN54	97	52.914	ENSEASG00005000579	TSEN54	79	53.191	Equus_asinus_asinus
ENSSPUG00000008988	TSEN54	97	53.147	ENSECAG00000004924	TSEN54	79	53.428	Equus_caballus
ENSSPUG00000008988	TSEN54	83	47.200	ENSEEUG00000008467	TSEN54	80	47.200	Erinaceus_europaeus
ENSSPUG00000008988	TSEN54	96	42.727	ENSELUG00000017703	tsen54	75	42.955	Esox_lucius
ENSSPUG00000008988	TSEN54	99	52.018	ENSFCAG00000023712	TSEN54	79	53.396	Felis_catus
ENSSPUG00000008988	TSEN54	97	56.075	ENSFALG00000001119	TSEN54	77	56.901	Ficedula_albicollis
ENSSPUG00000008988	TSEN54	83	48.238	ENSFDAG00000019090	TSEN54	79	48.509	Fukomys_damarensis
ENSSPUG00000008988	TSEN54	96	42.991	ENSFHEG00000005470	tsen54	79	43.897	Fundulus_heteroclitus
ENSSPUG00000008988	TSEN54	71	46.857	ENSGMOG00000013146	tsen54	73	46.857	Gadus_morhua
ENSSPUG00000008988	TSEN54	92	54.458	ENSGALG00000047163	TSEN54	79	54.458	Gallus_gallus
ENSSPUG00000008988	TSEN54	96	42.623	ENSGAFG00000005111	tsen54	79	43.224	Gambusia_affinis
ENSSPUG00000008988	TSEN54	96	42.824	ENSGACG00000014987	tsen54	81	43.294	Gasterosteus_aculeatus
ENSSPUG00000008988	TSEN54	97	65.068	ENSGAGG00000006825	TSEN54	79	65.741	Gopherus_agassizii
ENSSPUG00000008988	TSEN54	95	51.064	ENSGGOG00000009417	TSEN54	82	52.482	Gorilla_gorilla
ENSSPUG00000008988	TSEN54	98	43.151	ENSHBUG00000018296	tsen54	81	43.721	Haplochromis_burtoni
ENSSPUG00000008988	TSEN54	100	52.596	ENSHGLG00000007979	TSEN54	86	53.286	Heterocephalus_glaber_female
ENSSPUG00000008988	TSEN54	100	51.467	ENSHGLG00100005497	TSEN54	86	52.113	Heterocephalus_glaber_male
ENSSPUG00000008988	TSEN54	77	39.316	ENSHCOG00000007481	tsen54	78	39.601	Hippocampus_comes
ENSSPUG00000008988	TSEN54	99	37.671	ENSIPUG00000000590	tsen54	79	39.437	Ictalurus_punctatus
ENSSPUG00000008988	TSEN54	97	50.469	ENSSTOG00000012883	TSEN54	80	50.472	Ictidomys_tridecemlineatus
ENSSPUG00000008988	TSEN54	100	52.125	ENSJJAG00000007365	Tsen54	90	52.125	Jaculus_jaculus
ENSSPUG00000008988	TSEN54	96	42.956	ENSKMAG00000006944	tsen54	80	42.956	Kryptolebias_marmoratus
ENSSPUG00000008988	TSEN54	96	41.259	ENSLBEG00000004199	tsen54	79	41.492	Labrus_bergylta
ENSSPUG00000008988	TSEN54	96	44.573	ENSLACG00000009497	TSEN54	82	44.573	Latimeria_chalumnae
ENSSPUG00000008988	TSEN54	96	45.370	ENSLOCG00000011191	tsen54	80	45.370	Lepisosteus_oculatus
ENSSPUG00000008988	TSEN54	91	50.856	ENSLAFG00000011655	TSEN54	75	50.856	Loxodonta_africana
ENSSPUG00000008988	TSEN54	100	50.450	ENSMFAG00000000712	TSEN54	87	58.710	Macaca_fascicularis
ENSSPUG00000008988	TSEN54	100	50.225	ENSMNEG00000029199	TSEN54	87	58.710	Macaca_nemestrina
ENSSPUG00000008988	TSEN54	83	47.568	ENSMLEG00000044168	TSEN54	70	49.189	Mandrillus_leucophaeus
ENSSPUG00000008988	TSEN54	96	45.070	ENSMAMG00000019773	tsen54	79	45.070	Mastacembelus_armatus
ENSSPUG00000008988	TSEN54	98	42.369	ENSMZEG00005000884	tsen54	79	42.923	Maylandia_zebra
ENSSPUG00000008988	TSEN54	94	54.460	ENSMGAG00000009556	TSEN54	78	54.028	Meleagris_gallopavo
ENSSPUG00000008988	TSEN54	97	52.681	ENSMAUG00000016838	Tsen54	86	52.693	Mesocricetus_auratus
ENSSPUG00000008988	TSEN54	100	51.577	ENSMICG00000044012	TSEN54	78	52.955	Microcebus_murinus
ENSSPUG00000008988	TSEN54	97	52.103	ENSMOCG00000021585	Tsen54	80	52.347	Microtus_ochrogaster
ENSSPUG00000008988	TSEN54	66	62.581	ENSMMOG00000020189	tsen54	80	39.858	Mola_mola
ENSSPUG00000008988	TSEN54	96	53.089	ENSMODG00000007438	TSEN54	78	53.103	Monodelphis_domestica
ENSSPUG00000008988	TSEN54	96	43.115	ENSMALG00000020573	tsen54	80	44.731	Monopterus_albus
ENSSPUG00000008988	TSEN54	100	49.776	MGP_CAROLIEiJ_G0017417	Tsen54	86	50.350	Mus_caroli
ENSSPUG00000008988	TSEN54	100	50.564	ENSMUSG00000020781	Tsen54	86	51.174	Mus_musculus
ENSSPUG00000008988	TSEN54	100	50.790	MGP_PahariEiJ_G0018547	Tsen54	86	51.408	Mus_pahari
ENSSPUG00000008988	TSEN54	100	50.339	MGP_SPRETEiJ_G0018262	Tsen54	86	50.939	Mus_spretus
ENSSPUG00000008988	TSEN54	100	51.910	ENSMPUG00000013870	TSEN54	83	52.584	Mustela_putorius_furo
ENSSPUG00000008988	TSEN54	100	51.236	ENSMLUG00000015298	TSEN54	78	52.830	Myotis_lucifugus
ENSSPUG00000008988	TSEN54	100	51.693	ENSNGAG00000015673	Tsen54	86	52.347	Nannospalax_galili
ENSSPUG00000008988	TSEN54	86	45.524	ENSMEUG00000011908	TSEN54	81	45.524	Notamacropus_eugenii
ENSSPUG00000008988	TSEN54	97	47.552	ENSOPRG00000012513	TSEN54	79	47.541	Ochotona_princeps
ENSSPUG00000008988	TSEN54	98	42.438	ENSONIG00000009543	tsen54	79	42.989	Oreochromis_niloticus
ENSSPUG00000008988	TSEN54	99	48.764	ENSOCUG00000009875	TSEN54	78	50.469	Oryctolagus_cuniculus
ENSSPUG00000008988	TSEN54	96	41.822	ENSORLG00000000852	tsen54	79	41.822	Oryzias_latipes
ENSSPUG00000008988	TSEN54	96	42.623	ENSORLG00020018221	tsen54	79	43.124	Oryzias_latipes_hni
ENSSPUG00000008988	TSEN54	96	42.155	ENSORLG00015009413	tsen54	86	50.746	Oryzias_latipes_hsok
ENSSPUG00000008988	TSEN54	96	43.160	ENSOMEG00000014402	tsen54	76	43.160	Oryzias_melastigma
ENSSPUG00000008988	TSEN54	100	49.441	ENSOGAG00000001442	TSEN54	79	50.000	Otolemur_garnettii
ENSSPUG00000008988	TSEN54	83	49.465	ENSOARG00000010361	TSEN54	80	49.465	Ovis_aries
ENSSPUG00000008988	TSEN54	93	50.605	ENSPPAG00000043519	TSEN54	82	51.574	Pan_paniscus
ENSSPUG00000008988	TSEN54	99	52.466	ENSPPRG00000009162	TSEN54	79	53.864	Panthera_pardus
ENSSPUG00000008988	TSEN54	83	49.189	ENSPTIG00000019312	TSEN54	77	48.919	Panthera_tigris_altaica
ENSSPUG00000008988	TSEN54	100	50.225	ENSPTRG00000009646	TSEN54	84	58.667	Pan_troglodytes
ENSSPUG00000008988	TSEN54	99	50.339	ENSPANG00000020133	TSEN54	86	58.710	Papio_anubis
ENSSPUG00000008988	TSEN54	96	39.520	ENSPKIG00000023018	tsen54	80	40.611	Paramormyrops_kingsleyae
ENSSPUG00000008988	TSEN54	77	60.694	ENSPSIG00000012807	TSEN54	79	60.694	Pelodiscus_sinensis
ENSSPUG00000008988	TSEN54	80	37.222	ENSPMGG00000019578	tsen54	55	58.594	Periophthalmus_magnuspinnatus
ENSSPUG00000008988	TSEN54	100	50.564	ENSPEMG00000014857	Tsen54	89	50.790	Peromyscus_maniculatus_bairdii
ENSSPUG00000008988	TSEN54	96	42.453	ENSPFOG00000022740	tsen54	78	43.059	Poecilia_formosa
ENSSPUG00000008988	TSEN54	96	43.160	ENSPLAG00000014847	tsen54	79	43.294	Poecilia_latipinna
ENSSPUG00000008988	TSEN54	96	42.689	ENSPMEG00000022876	tsen54	79	43.294	Poecilia_mexicana
ENSSPUG00000008988	TSEN54	96	42.588	ENSPREG00000013090	tsen54	79	43.192	Poecilia_reticulata
ENSSPUG00000008988	TSEN54	68	63.743	ENSPPYG00000008629	TSEN54	80	49.747	Pongo_abelii
ENSSPUG00000008988	TSEN54	68	70.701	ENSPCAG00000002093	TSEN54	60	70.968	Procavia_capensis
ENSSPUG00000008988	TSEN54	99	50.452	ENSPCOG00000027880	TSEN54	79	52.009	Propithecus_coquereli
ENSSPUG00000008988	TSEN54	97	50.805	ENSPVAG00000008446	TSEN54	79	51.049	Pteropus_vampyrus
ENSSPUG00000008988	TSEN54	91	42.651	ENSPNYG00000010217	tsen54	81	42.651	Pundamilia_nyererei
ENSSPUG00000008988	TSEN54	96	42.227	ENSPNAG00000003770	tsen54	80	42.361	Pygocentrus_nattereri
ENSSPUG00000008988	TSEN54	100	51.802	ENSRNOG00000004598	Tsen54	83	51.802	Rattus_norvegicus
ENSSPUG00000008988	TSEN54	100	50.450	ENSRBIG00000043040	TSEN54	73	63.971	Rhinopithecus_bieti
ENSSPUG00000008988	TSEN54	100	50.450	ENSRROG00000030797	TSEN54	83	51.351	Rhinopithecus_roxellana
ENSSPUG00000008988	TSEN54	99	47.706	ENSSBOG00000013543	TSEN54	78	50.721	Saimiri_boliviensis_boliviensis
ENSSPUG00000008988	TSEN54	96	51.126	ENSSHAG00000018127	TSEN54	79	51.131	Sarcophilus_harrisii
ENSSPUG00000008988	TSEN54	77	42.566	ENSSFOG00015004093	tsen54	79	42.566	Scleropages_formosus
ENSSPUG00000008988	TSEN54	96	42.553	ENSSMAG00000012449	tsen54	80	43.488	Scophthalmus_maximus
ENSSPUG00000008988	TSEN54	96	43.091	ENSSDUG00000021506	tsen54	80	43.560	Seriola_dumerili
ENSSPUG00000008988	TSEN54	96	43.091	ENSSLDG00000016303	tsen54	80	43.560	Seriola_lalandi_dorsalis
ENSSPUG00000008988	TSEN54	77	37.283	ENSSPAG00000008047	tsen54	77	37.283	Stegastes_partitus
ENSSPUG00000008988	TSEN54	91	43.032	ENSSPAG00000008098	-	81	43.032	Stegastes_partitus
ENSSPUG00000008988	TSEN54	100	52.360	ENSSSCG00000036852	TSEN54	79	53.774	Sus_scrofa
ENSSPUG00000008988	TSEN54	83	56.640	ENSTGUG00000008548	TSEN54	80	56.640	Taeniopygia_guttata
ENSSPUG00000008988	TSEN54	96	42.623	ENSTRUG00000004230	tsen54	78	43.091	Takifugu_rubripes
ENSSPUG00000008988	TSEN54	96	43.218	ENSTNIG00000011281	tsen54	80	44.084	Tetraodon_nigroviridis
ENSSPUG00000008988	TSEN54	83	48.800	ENSTTRG00000015828	TSEN54	80	48.925	Tursiops_truncatus
ENSSPUG00000008988	TSEN54	77	47.384	ENSUAMG00000010045	TSEN54	78	61.832	Ursus_americanus
ENSSPUG00000008988	TSEN54	80	47.354	ENSUMAG00000008979	TSEN54	80	48.189	Ursus_maritimus
ENSSPUG00000008988	TSEN54	99	51.111	ENSVVUG00000011411	TSEN54	80	52.887	Vulpes_vulpes
ENSSPUG00000008988	TSEN54	99	46.861	ENSXETG00000012532	tsen54	78	47.552	Xenopus_tropicalis
ENSSPUG00000008988	TSEN54	68	59.873	ENSXCOG00000018245	tsen54	70	59.873	Xiphophorus_couchianus
ENSSPUG00000008988	TSEN54	96	43.868	ENSXMAG00000018818	tsen54	79	44.104	Xiphophorus_maculatus