EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000009044 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 44912 bases
Position: chrQEPC01001969.1:1226509-1271420
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011780	APOBEC_N	PF08210.11	8.2e-25	1	1
ENSSPUP00000011780	APOBEC_C	PF05240.14	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012567	-	1328	-	ENSSPUP00000011780	260 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000009044	-	52	35.664	ENSSPUG00000009022	AICDA	70	35.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009044	-	79	41.346	ENSG00000111701	APOBEC1	86	41.346	Homo_sapiens
ENSSPUG00000009044	-	83	41.743	ENSAMEG00000007098	APOBEC1	90	41.743	Ailuropoda_melanoleuca
ENSSPUG00000009044	-	70	41.436	ENSACAG00000028578	-	98	41.436	Anolis_carolinensis
ENSSPUG00000009044	-	81	42.180	ENSANAG00000027743	APOBEC1	83	42.180	Aotus_nancymaae
ENSSPUG00000009044	-	81	39.336	ENSBTAG00000014683	APOBEC1	88	39.336	Bos_taurus
ENSSPUG00000009044	-	78	41.463	ENSCJAG00000005398	APOBEC1	91	41.463	Callithrix_jacchus
ENSSPUG00000009044	-	85	42.857	ENSCAFG00000013901	APOBEC1	91	42.857	Canis_familiaris
ENSSPUG00000009044	-	77	44.608	ENSCAFG00020003511	APOBEC1	83	44.608	Canis_lupus_dingo
ENSSPUG00000009044	-	86	39.556	ENSCHIG00000011898	APOBEC1	91	39.556	Capra_hircus
ENSSPUG00000009044	-	52	48.529	ENSTSYG00000029141	APOBEC1	94	48.529	Carlito_syrichta
ENSSPUG00000009044	-	77	41.584	ENSCAPG00000015882	-	92	41.584	Cavia_aperea
ENSSPUG00000009044	-	82	40.930	ENSCPOG00000033068	APOBEC1	89	40.930	Cavia_porcellus
ENSSPUG00000009044	-	81	42.180	ENSCCAG00000022258	APOBEC1	88	42.180	Cebus_capucinus
ENSSPUG00000009044	-	79	41.546	ENSCATG00000021613	APOBEC1	82	41.546	Cercocebus_atys
ENSSPUG00000009044	-	78	40.476	ENSCLAG00000014645	APOBEC1	87	40.476	Chinchilla_lanigera
ENSSPUG00000009044	-	65	39.766	ENSCSAG00000009817	APOBEC1	88	39.766	Chlorocebus_sabaeus
ENSSPUG00000009044	-	90	43.162	ENSCPBG00000014328	-	100	43.162	Chrysemys_picta_bellii
ENSSPUG00000009044	-	73	46.597	ENSCPBG00000014329	-	52	46.597	Chrysemys_picta_bellii
ENSSPUG00000009044	-	85	43.439	ENSCPBG00000014327	-	85	43.439	Chrysemys_picta_bellii
ENSSPUG00000009044	-	72	47.340	ENSCPBG00000014331	-	77	47.340	Chrysemys_picta_bellii
ENSSPUG00000009044	-	71	54.891	ENSCPBG00000014335	-	74	54.891	Chrysemys_picta_bellii
ENSSPUG00000009044	-	65	44.706	ENSCPBG00000017398	-	74	44.706	Chrysemys_picta_bellii
ENSSPUG00000009044	-	79	40.865	ENSCANG00000038359	APOBEC1	88	40.865	Colobus_angolensis_palliatus
ENSSPUG00000009044	-	79	45.192	ENSCGRG00001011130	Apobec1	89	45.192	Cricetulus_griseus_chok1gshd
ENSSPUG00000009044	-	79	45.192	ENSCGRG00000008644	Apobec1	89	45.192	Cricetulus_griseus_crigri
ENSSPUG00000009044	-	79	42.995	ENSDNOG00000010926	APOBEC1	86	42.995	Dasypus_novemcinctus
ENSSPUG00000009044	-	77	34.826	ENSDORG00000023717	Apobec1	93	34.826	Dipodomys_ordii
ENSSPUG00000009044	-	79	40.865	ENSETEG00000004867	APOBEC1	87	40.865	Echinops_telfairi
ENSSPUG00000009044	-	86	40.889	ENSEASG00005015951	APOBEC1	92	40.889	Equus_asinus_asinus
ENSSPUG00000009044	-	67	39.655	ENSECAG00000017163	APOBEC1	90	39.655	Equus_caballus
ENSSPUG00000009044	-	81	40.845	ENSEEUG00000009112	-	92	40.845	Erinaceus_europaeus
ENSSPUG00000009044	-	50	43.511	ENSEEUG00000007530	-	61	43.511	Erinaceus_europaeus
ENSSPUG00000009044	-	86	41.333	ENSFCAG00000009350	APOBEC1	92	41.333	Felis_catus
ENSSPUG00000009044	-	57	45.638	ENSFALG00000007257	-	74	45.638	Ficedula_albicollis
ENSSPUG00000009044	-	72	38.421	ENSFDAG00000018470	APOBEC1	89	38.421	Fukomys_damarensis
ENSSPUG00000009044	-	86	39.910	ENSGAGG00000021744	-	87	39.910	Gopherus_agassizii
ENSSPUG00000009044	-	69	46.703	ENSGAGG00000021745	-	67	47.253	Gopherus_agassizii
ENSSPUG00000009044	-	70	42.857	ENSGAGG00000006624	-	65	42.857	Gopherus_agassizii
ENSSPUG00000009044	-	67	43.103	ENSGAGG00000004947	-	86	43.262	Gopherus_agassizii
ENSSPUG00000009044	-	85	54.260	ENSGAGG00000011837	-	93	54.260	Gopherus_agassizii
ENSSPUG00000009044	-	79	40.097	ENSHGLG00000001495	APOBEC1	86	40.097	Heterocephalus_glaber_female
ENSSPUG00000009044	-	79	40.097	ENSHGLG00100002187	APOBEC1	86	40.097	Heterocephalus_glaber_male
ENSSPUG00000009044	-	54	43.571	ENSSTOG00000021971	APOBEC1	98	44.898	Ictidomys_tridecemlineatus
ENSSPUG00000009044	-	81	41.981	ENSJJAG00000022108	Apobec1	91	41.981	Jaculus_jaculus
ENSSPUG00000009044	-	71	45.652	ENSLAFG00000030837	APOBEC1	81	45.652	Loxodonta_africana
ENSSPUG00000009044	-	81	40.566	ENSMFAG00000000277	APOBEC1	88	40.566	Macaca_fascicularis
ENSSPUG00000009044	-	81	41.038	ENSMNEG00000029670	APOBEC1	88	41.038	Macaca_nemestrina
ENSSPUG00000009044	-	79	41.546	ENSMLEG00000036301	APOBEC1	86	41.546	Mandrillus_leucophaeus
ENSSPUG00000009044	-	78	42.857	ENSMAUG00000022167	Apobec1	90	42.857	Mesocricetus_auratus
ENSSPUG00000009044	-	79	42.381	ENSMICG00000043645	APOBEC1	88	41.463	Microcebus_murinus
ENSSPUG00000009044	-	82	43.256	ENSMODG00000018004	APOBEC1	90	43.256	Monodelphis_domestica
ENSSPUG00000009044	-	79	46.411	ENSMUSG00000040613	Apobec1	91	46.903	Mus_musculus
ENSSPUG00000009044	-	79	45.894	MGP_PahariEiJ_G0022580	-	91	47.788	Mus_pahari
ENSSPUG00000009044	-	79	46.411	MGP_SPRETEiJ_G0029857	Apobec1	91	46.903	Mus_spretus
ENSSPUG00000009044	-	86	40.351	ENSMPUG00000017532	APOBEC1	92	40.351	Mustela_putorius_furo
ENSSPUG00000009044	-	79	40.097	ENSNGAG00000022607	Apobec1	89	40.097	Nannospalax_galili
ENSSPUG00000009044	-	79	41.346	ENSNLEG00000005342	APOBEC1	86	41.346	Nomascus_leucogenys
ENSSPUG00000009044	-	82	43.721	ENSMEUG00000013406	APOBEC1	90	43.721	Notamacropus_eugenii
ENSSPUG00000009044	-	65	43.195	ENSOPRG00000009508	-	92	43.195	Ochotona_princeps
ENSSPUG00000009044	-	79	41.063	ENSOCUG00000025736	APOBEC1	76	41.063	Oryctolagus_cuniculus
ENSSPUG00000009044	-	83	42.661	ENSOGAG00000026415	APOBEC1	90	42.661	Otolemur_garnettii
ENSSPUG00000009044	-	81	40.758	ENSOARG00000002072	APOBEC1	87	40.758	Ovis_aries
ENSSPUG00000009044	-	83	38.813	ENSPPAG00000027657	APOBEC1	89	38.813	Pan_paniscus
ENSSPUG00000009044	-	86	41.333	ENSPPRG00000012182	APOBEC1	92	41.333	Panthera_pardus
ENSSPUG00000009044	-	86	41.333	ENSPTIG00000020280	APOBEC1	92	41.333	Panthera_tigris_altaica
ENSSPUG00000009044	-	79	41.827	ENSPTRG00000004614	APOBEC1	86	41.827	Pan_troglodytes
ENSSPUG00000009044	-	79	41.346	ENSPANG00000021027	APOBEC1	86	41.346	Papio_anubis
ENSSPUG00000009044	-	68	44.693	ENSPSIG00000012568	-	75	44.693	Pelodiscus_sinensis
ENSSPUG00000009044	-	79	44.928	ENSPEMG00000023841	Apobec1	89	44.928	Peromyscus_maniculatus_bairdii
ENSSPUG00000009044	-	82	42.326	ENSPCIG00000023973	APOBEC1	90	42.326	Phascolarctos_cinereus
ENSSPUG00000009044	-	79	41.827	ENSPPYG00000004228	APOBEC1	82	41.827	Pongo_abelii
ENSSPUG00000009044	-	67	42.857	ENSPCAG00000008733	APOBEC1	92	42.857	Procavia_capensis
ENSSPUG00000009044	-	79	40.291	ENSPCOG00000013957	APOBEC1	90	40.291	Propithecus_coquereli
ENSSPUG00000009044	-	52	45.588	ENSPVAG00000010709	APOBEC1	57	45.588	Pteropus_vampyrus
ENSSPUG00000009044	-	79	44.498	ENSRNOG00000015411	Apobec1	89	44.498	Rattus_norvegicus
ENSSPUG00000009044	-	79	40.865	ENSRBIG00000031161	APOBEC1	86	40.865	Rhinopithecus_bieti
ENSSPUG00000009044	-	79	40.865	ENSRROG00000033576	APOBEC1	86	40.865	Rhinopithecus_roxellana
ENSSPUG00000009044	-	68	41.573	ENSSBOG00000030587	APOBEC1	99	41.573	Saimiri_boliviensis_boliviensis
ENSSPUG00000009044	-	82	41.395	ENSSHAG00000008925	APOBEC1	93	41.395	Sarcophilus_harrisii
ENSSPUG00000009044	-	50	43.846	ENSSARG00000011972	-	97	43.846	Sorex_araneus
ENSSPUG00000009044	-	55	44.056	ENSSARG00000000032	-	82	44.056	Sorex_araneus
ENSSPUG00000009044	-	85	40.271	ENSSSCG00000000668	APOBEC1	91	40.271	Sus_scrofa
ENSSPUG00000009044	-	56	48.276	ENSTGUG00000013118	-	99	48.276	Taeniopygia_guttata
ENSSPUG00000009044	-	78	42.439	ENSTBEG00000010043	APOBEC1	85	42.439	Tupaia_belangeri
ENSSPUG00000009044	-	56	46.207	ENSTTRG00000014015	APOBEC1	76	46.207	Tursiops_truncatus
ENSSPUG00000009044	-	83	42.466	ENSUAMG00000011636	APOBEC1	87	42.466	Ursus_americanus
ENSSPUG00000009044	-	83	42.009	ENSUMAG00000016552	APOBEC1	87	42.009	Ursus_maritimus
ENSSPUG00000009044	-	79	41.063	ENSVPAG00000001343	APOBEC1	86	41.063	Vicugna_pacos
ENSSPUG00000009044	-	85	42.342	ENSVVUG00000010522	APOBEC1	91	42.342	Vulpes_vulpes