EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000009198 (Gene tree)
Gene ID: -
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 26132 bases
Position: chrQEPC01009666.1:2779556-2805687
Accession: 10769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000011992	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000012010	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000012035	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000012073	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000012099	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000012135	DUF382	PF04037.13	1.3e-59	1	1
ENSSPUP00000011992	SAP	PF02037.27	2.3e-08	1	1
ENSSPUP00000012010	SAP	PF02037.27	2.3e-08	1	1
ENSSPUP00000012035	SAP	PF02037.27	2.3e-08	1	1
ENSSPUP00000012073	SAP	PF02037.27	2.3e-08	1	1
ENSSPUP00000012099	SAP	PF02037.27	2.3e-08	1	1
ENSSPUP00000012135	SAP	PF02037.27	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012834	SF3B2-203	2847	-	ENSSPUP00000012035	865 (aa)	-	-
ENSSPUT00000012808	SF3B2-202	2847	-	ENSSPUP00000012010	865 (aa)	-	-
ENSSPUT00000012904	SF3B2-205	2847	-	ENSSPUP00000012099	865 (aa)	-	-
ENSSPUT00000012872	SF3B2-204	2847	-	ENSSPUP00000012073	865 (aa)	-	-
ENSSPUT00000012789	SF3B2-201	2847	-	ENSSPUP00000011992	865 (aa)	-	-
ENSSPUT00000012940	SF3B2-206	2847	-	ENSSPUP00000012135	865 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009198	SF3B2	85	84.554	ENSG00000087365	SF3B2	99	96.825	Homo_sapiens
ENSSPUG00000009198	SF3B2	58	88.757	ENSAPOG00000001974	sf3b2	69	81.281	Acanthochromis_polyacanthus
ENSSPUG00000009198	SF3B2	85	83.990	ENSAMEG00000017206	SF3B2	100	80.022	Ailuropoda_melanoleuca
ENSSPUG00000009198	SF3B2	84	73.142	ENSACIG00000000624	sf3b2	73	80.787	Amphilophus_citrinellus
ENSSPUG00000009198	SF3B2	98	69.580	ENSAOCG00000009207	sf3b2	73	81.790	Amphiprion_ocellaris
ENSSPUG00000009198	SF3B2	98	69.257	ENSAPEG00000002762	sf3b2	72	81.300	Amphiprion_percula
ENSSPUG00000009198	SF3B2	100	69.791	ENSACAG00000008615	SF3B2	100	67.956	Anolis_carolinensis
ENSSPUG00000009198	SF3B2	85	84.687	ENSANAG00000029120	SF3B2	100	80.177	Aotus_nancymaae
ENSSPUG00000009198	SF3B2	84	73.907	ENSACLG00000014771	sf3b2	97	66.135	Astatotilapia_calliptera
ENSSPUG00000009198	SF3B2	75	87.595	ENSAMXG00000007929	sf3b2	85	78.788	Astyanax_mexicanus
ENSSPUG00000009198	SF3B2	85	83.858	ENSBTAG00000002778	SF3B2	100	79.911	Bos_taurus
ENSSPUG00000009198	SF3B2	62	51.521	WBGene00021004	sftb-2	90	51.163	Caenorhabditis_elegans
ENSSPUG00000009198	SF3B2	85	84.554	ENSCJAG00000001656	SF3B2	100	80.177	Callithrix_jacchus
ENSSPUG00000009198	SF3B2	85	83.968	ENSCAFG00000013033	SF3B2	100	80.089	Canis_familiaris
ENSSPUG00000009198	SF3B2	85	83.968	ENSCAFG00020015382	SF3B2	100	80.089	Canis_lupus_dingo
ENSSPUG00000009198	SF3B2	85	83.858	ENSCHIG00000011211	SF3B2	100	79.889	Capra_hircus
ENSSPUG00000009198	SF3B2	85	84.554	ENSTSYG00000000959	SF3B2	100	80.936	Carlito_syrichta
ENSSPUG00000009198	SF3B2	58	70.588	ENSCAPG00000006065	SF3B2	82	98.305	Cavia_aperea
ENSSPUG00000009198	SF3B2	75	82.537	ENSCPOG00000008294	SF3B2	100	78.922	Cavia_porcellus
ENSSPUG00000009198	SF3B2	85	84.554	ENSCCAG00000035256	SF3B2	100	80.177	Cebus_capucinus
ENSSPUG00000009198	SF3B2	85	84.554	ENSCATG00000042240	SF3B2	100	80.471	Cercocebus_atys
ENSSPUG00000009198	SF3B2	85	84.043	ENSCLAG00000016852	SF3B2	100	80.846	Chinchilla_lanigera
ENSSPUG00000009198	SF3B2	85	82.682	ENSCSAG00000008121	SF3B2	100	78.564	Chlorocebus_sabaeus
ENSSPUG00000009198	SF3B2	89	95.876	ENSCHOG00000001476	SF3B2	91	88.144	Choloepus_hoffmanni
ENSSPUG00000009198	SF3B2	100	81.989	ENSCPBG00000022465	SF3B2	96	90.665	Chrysemys_picta_bellii
ENSSPUG00000009198	SF3B2	61	68.550	ENSCING00000005665	-	84	67.481	Ciona_intestinalis
ENSSPUG00000009198	SF3B2	61	68.421	ENSCSAVG00000002029	-	86	66.484	Ciona_savignyi
ENSSPUG00000009198	SF3B2	85	84.554	ENSCANG00000039680	SF3B2	100	80.044	Colobus_angolensis_palliatus
ENSSPUG00000009198	SF3B2	85	83.957	ENSCGRG00001015741	Sf3b2	100	81.377	Cricetulus_griseus_chok1gshd
ENSSPUG00000009198	SF3B2	85	83.957	ENSCGRG00000018110	Sf3b2	100	81.377	Cricetulus_griseus_crigri
ENSSPUG00000009198	SF3B2	82	74.095	ENSCSEG00000000230	sf3b2	78	80.763	Cynoglossus_semilaevis
ENSSPUG00000009198	SF3B2	84	74.730	ENSCVAG00000003357	sf3b2	74	81.487	Cyprinodon_variegatus
ENSSPUG00000009198	SF3B2	82	75.408	ENSDARG00000018049	sf3b2	76	81.947	Danio_rerio
ENSSPUG00000009198	SF3B2	100	80.599	ENSDNOG00000009484	SF3B2	100	80.423	Dasypus_novemcinctus
ENSSPUG00000009198	SF3B2	85	84.329	ENSDORG00000002495	Sf3b2	100	81.194	Dipodomys_ordii
ENSSPUG00000009198	SF3B2	84	87.269	ENSETEG00000020284	SF3B2	86	87.269	Echinops_telfairi
ENSSPUG00000009198	SF3B2	99	58.180	ENSEBUG00000013703	sf3b2	92	70.840	Eptatretus_burgeri
ENSSPUG00000009198	SF3B2	85	83.312	ENSEASG00005004508	SF3B2	100	79.448	Equus_asinus_asinus
ENSSPUG00000009198	SF3B2	85	83.312	ENSECAG00000024461	SF3B2	100	79.448	Equus_caballus
ENSSPUG00000009198	SF3B2	61	94.915	ENSEEUG00000014278	-	60	94.915	Erinaceus_europaeus
ENSSPUG00000009198	SF3B2	98	65.649	ENSELUG00000005586	sf3b2	84	74.694	Esox_lucius
ENSSPUG00000009198	SF3B2	85	86.022	ENSFCAG00000013289	SF3B2	100	81.746	Felis_catus
ENSSPUG00000009198	SF3B2	78	72.404	ENSFALG00000014653	SF3B2	89	74.086	Ficedula_albicollis
ENSSPUG00000009198	SF3B2	85	84.728	ENSFDAG00000019806	SF3B2	100	80.509	Fukomys_damarensis
ENSSPUG00000009198	SF3B2	98	67.426	ENSFHEG00000020968	sf3b2	97	67.009	Fundulus_heteroclitus
ENSSPUG00000009198	SF3B2	74	79.601	ENSGMOG00000012131	sf3b2	96	81.505	Gadus_morhua
ENSSPUG00000009198	SF3B2	61	88.636	ENSGAFG00000001675	sf3b2	74	79.812	Gambusia_affinis
ENSSPUG00000009198	SF3B2	74	79.846	ENSGACG00000019012	sf3b2	96	81.141	Gasterosteus_aculeatus
ENSSPUG00000009198	SF3B2	100	87.041	ENSGAGG00000023916	SF3B2	73	91.614	Gopherus_agassizii
ENSSPUG00000009198	SF3B2	91	97.167	ENSGGOG00000028448	SF3B2	100	97.167	Gorilla_gorilla
ENSSPUG00000009198	SF3B2	84	74.069	ENSHBUG00000017349	sf3b2	74	80.885	Haplochromis_burtoni
ENSSPUG00000009198	SF3B2	85	84.176	ENSHGLG00000010807	SF3B2	100	80.846	Heterocephalus_glaber_female
ENSSPUG00000009198	SF3B2	85	84.176	ENSHGLG00100006361	SF3B2	100	80.846	Heterocephalus_glaber_male
ENSSPUG00000009198	SF3B2	98	66.591	ENSHCOG00000016203	sf3b2	74	80.096	Hippocampus_comes
ENSSPUG00000009198	SF3B2	98	65.953	ENSIPUG00000009383	sf3b2	73	80.125	Ictalurus_punctatus
ENSSPUG00000009198	SF3B2	85	84.043	ENSSTOG00000028892	SF3B2	100	80.512	Ictidomys_tridecemlineatus
ENSSPUG00000009198	SF3B2	85	84.953	ENSJJAG00000018193	Sf3b2	100	80.244	Jaculus_jaculus
ENSSPUG00000009198	SF3B2	61	88.491	ENSKMAG00000020181	sf3b2	75	78.923	Kryptolebias_marmoratus
ENSSPUG00000009198	SF3B2	98	70.242	ENSLBEG00000027739	sf3b2	88	80.284	Labrus_bergylta
ENSSPUG00000009198	SF3B2	82	82.656	ENSLACG00000010429	SF3B2	88	85.039	Latimeria_chalumnae
ENSSPUG00000009198	SF3B2	85	85.772	ENSLAFG00000002128	SF3B2	100	81.200	Loxodonta_africana
ENSSPUG00000009198	SF3B2	85	84.441	ENSMFAG00000003064	SF3B2	100	80.381	Macaca_fascicularis
ENSSPUG00000009198	SF3B2	85	79.627	ENSMMUG00000011743	SF3B2	100	77.540	Macaca_mulatta
ENSSPUG00000009198	SF3B2	85	83.377	ENSMNEG00000034437	SF3B2	100	80.739	Macaca_nemestrina
ENSSPUG00000009198	SF3B2	85	83.377	ENSMLEG00000029373	SF3B2	100	80.739	Mandrillus_leucophaeus
ENSSPUG00000009198	SF3B2	84	74.738	ENSMAMG00000014103	sf3b2	72	81.562	Mastacembelus_armatus
ENSSPUG00000009198	SF3B2	84	73.907	ENSMZEG00005020789	sf3b2	97	66.135	Maylandia_zebra
ENSSPUG00000009198	SF3B2	100	78.125	ENSMICG00000016942	-	100	77.993	Microcebus_murinus
ENSSPUG00000009198	SF3B2	85	84.574	ENSMICG00000008565	-	100	80.624	Microcebus_murinus
ENSSPUG00000009198	SF3B2	85	83.690	ENSMOCG00000003136	Sf3b2	100	81.151	Microtus_ochrogaster
ENSSPUG00000009198	SF3B2	85	84.169	ENSMODG00000008490	-	92	85.885	Monodelphis_domestica
ENSSPUG00000009198	SF3B2	73	83.491	ENSMODG00000025020	-	99	82.520	Monodelphis_domestica
ENSSPUG00000009198	SF3B2	85	72.533	ENSMALG00000015137	sf3b2	74	80.343	Monopterus_albus
ENSSPUG00000009198	SF3B2	85	83.910	MGP_CAROLIEiJ_G0022539	Sf3b2	100	81.236	Mus_caroli
ENSSPUG00000009198	SF3B2	85	84.070	ENSMUSG00000024853	Sf3b2	100	81.377	Mus_musculus
ENSSPUG00000009198	SF3B2	85	84.070	MGP_PahariEiJ_G0014036	Sf3b2	100	81.377	Mus_pahari
ENSSPUG00000009198	SF3B2	85	84.070	MGP_SPRETEiJ_G0023453	Sf3b2	100	81.264	Mus_spretus
ENSSPUG00000009198	SF3B2	85	83.968	ENSMPUG00000011349	SF3B2	100	80.089	Mustela_putorius_furo
ENSSPUG00000009198	SF3B2	85	83.727	ENSMLUG00000011136	SF3B2	100	79.227	Myotis_lucifugus
ENSSPUG00000009198	SF3B2	85	84.176	ENSNGAG00000012103	Sf3b2	100	78.683	Nannospalax_galili
ENSSPUG00000009198	SF3B2	85	81.167	ENSNLEG00000006007	SF3B2	100	75.280	Nomascus_leucogenys
ENSSPUG00000009198	SF3B2	87	90.909	ENSMEUG00000000019	SF3B2	91	90.909	Notamacropus_eugenii
ENSSPUG00000009198	SF3B2	100	76.923	ENSODEG00000017764	SF3B2	100	77.171	Octodon_degus
ENSSPUG00000009198	SF3B2	98	70.676	ENSONIG00000013068	sf3b2	75	80.341	Oreochromis_niloticus
ENSSPUG00000009198	SF3B2	88	77.721	ENSOANG00000012482	SF3B2	97	76.732	Ornithorhynchus_anatinus
ENSSPUG00000009198	SF3B2	62	54.004	ENSOCUG00000024154	-	100	53.558	Oryctolagus_cuniculus
ENSSPUG00000009198	SF3B2	98	67.389	ENSORLG00000008235	sf3b2	72	80.787	Oryzias_latipes
ENSSPUG00000009198	SF3B2	98	67.389	ENSORLG00020005357	sf3b2	74	80.787	Oryzias_latipes_hni
ENSSPUG00000009198	SF3B2	98	67.617	ENSORLG00015022454	sf3b2	82	79.459	Oryzias_latipes_hsok
ENSSPUG00000009198	SF3B2	98	66.437	ENSOMEG00000017480	sf3b2	75	80.190	Oryzias_melastigma
ENSSPUG00000009198	SF3B2	85	78.385	ENSOGAG00000005799	SF3B2	100	74.917	Otolemur_garnettii
ENSSPUG00000009198	SF3B2	100	79.731	ENSOARG00000002125	SF3B2	100	79.059	Ovis_aries
ENSSPUG00000009198	SF3B2	85	83.598	ENSPPAG00000007359	SF3B2	100	79.754	Pan_paniscus
ENSSPUG00000009198	SF3B2	85	86.022	ENSPPRG00000013334	SF3B2	100	81.746	Panthera_pardus
ENSSPUG00000009198	SF3B2	85	86.022	ENSPTIG00000015022	SF3B2	100	81.859	Panthera_tigris_altaica
ENSSPUG00000009198	SF3B2	85	83.598	ENSPTRG00000003912	SF3B2	100	79.754	Pan_troglodytes
ENSSPUG00000009198	SF3B2	85	84.554	ENSPANG00000008593	SF3B2	100	80.471	Papio_anubis
ENSSPUG00000009198	SF3B2	98	67.460	ENSPKIG00000016576	sf3b2	86	82.137	Paramormyrops_kingsleyae
ENSSPUG00000009198	SF3B2	94	88.392	ENSPSIG00000003158	SF3B2	100	89.694	Pelodiscus_sinensis
ENSSPUG00000009198	SF3B2	84	67.325	ENSPMGG00000000819	sf3b2	81	76.108	Periophthalmus_magnuspinnatus
ENSSPUG00000009198	SF3B2	93	71.011	ENSPEMG00000015451	-	100	72.338	Peromyscus_maniculatus_bairdii
ENSSPUG00000009198	SF3B2	85	84.091	ENSPEMG00000015437	Sf3b2	100	81.490	Peromyscus_maniculatus_bairdii
ENSSPUG00000009198	SF3B2	100	80.663	ENSPCIG00000008381	SF3B2	99	83.549	Phascolarctos_cinereus
ENSSPUG00000009198	SF3B2	98	68.750	ENSPFOG00000002552	sf3b2	74	79.656	Poecilia_formosa
ENSSPUG00000009198	SF3B2	61	89.015	ENSPLAG00000001471	sf3b2	74	79.969	Poecilia_latipinna
ENSSPUG00000009198	SF3B2	98	69.099	ENSPMEG00000013180	sf3b2	74	79.467	Poecilia_mexicana
ENSSPUG00000009198	SF3B2	61	88.826	ENSPREG00000002665	sf3b2	75	79.688	Poecilia_reticulata
ENSSPUG00000009198	SF3B2	57	76.692	ENSPPYG00000003034	-	98	72.474	Pongo_abelii
ENSSPUG00000009198	SF3B2	85	83.858	ENSPCAG00000005129	SF3B2	100	79.444	Procavia_capensis
ENSSPUG00000009198	SF3B2	85	84.574	ENSPCOG00000025375	SF3B2	100	80.735	Propithecus_coquereli
ENSSPUG00000009198	SF3B2	56	96.963	ENSPVAG00000016975	-	55	96.963	Pteropus_vampyrus
ENSSPUG00000009198	SF3B2	53	98.246	ENSPVAG00000005466	-	84	98.246	Pteropus_vampyrus
ENSSPUG00000009198	SF3B2	81	74.028	ENSPNYG00000023594	sf3b2	85	79.749	Pundamilia_nyererei
ENSSPUG00000009198	SF3B2	98	67.193	ENSPNAG00000001891	sf3b2	71	81.132	Pygocentrus_nattereri
ENSSPUG00000009198	SF3B2	85	83.690	ENSRNOG00000020412	Sf3b2	100	81.038	Rattus_norvegicus
ENSSPUG00000009198	SF3B2	85	84.554	ENSRBIG00000034065	SF3B2	100	80.602	Rhinopithecus_bieti
ENSSPUG00000009198	SF3B2	85	84.554	ENSRROG00000034496	SF3B2	100	80.602	Rhinopithecus_roxellana
ENSSPUG00000009198	SF3B2	100	78.156	ENSSBOG00000026337	SF3B2	100	77.935	Saimiri_boliviensis_boliviensis
ENSSPUG00000009198	SF3B2	97	64.028	ENSSHAG00000018043	-	77	71.981	Sarcophilus_harrisii
ENSSPUG00000009198	SF3B2	100	74.342	ENSSHAG00000010933	-	70	85.266	Sarcophilus_harrisii
ENSSPUG00000009198	SF3B2	98	68.427	ENSSFOG00015021125	sf3b2	71	80.377	Scleropages_formosus
ENSSPUG00000009198	SF3B2	61	88.783	ENSSMAG00000004079	sf3b2	75	81.747	Scophthalmus_maximus
ENSSPUG00000009198	SF3B2	61	88.783	ENSSDUG00000008499	sf3b2	70	79.777	Seriola_dumerili
ENSSPUG00000009198	SF3B2	61	88.783	ENSSLDG00000006838	sf3b2	74	80.680	Seriola_lalandi_dorsalis
ENSSPUG00000009198	SF3B2	52	98.413	ENSSARG00000003707	-	68	98.413	Sorex_araneus
ENSSPUG00000009198	SF3B2	98	66.741	ENSSPAG00000004406	sf3b2	73	79.237	Stegastes_partitus
ENSSPUG00000009198	SF3B2	85	83.968	ENSSSCG00000012957	SF3B2	100	80.089	Sus_scrofa
ENSSPUG00000009198	SF3B2	98	56.914	ENSTRUG00000007611	sf3b2	95	66.440	Takifugu_rubripes
ENSSPUG00000009198	SF3B2	85	72.267	ENSTNIG00000007441	sf3b2	74	78.254	Tetraodon_nigroviridis
ENSSPUG00000009198	SF3B2	91	76.184	ENSTBEG00000004258	SF3B2	73	95.000	Tupaia_belangeri
ENSSPUG00000009198	SF3B2	85	84.121	ENSTTRG00000014339	SF3B2	100	79.646	Tursiops_truncatus
ENSSPUG00000009198	SF3B2	82	84.011	ENSUAMG00000020754	SF3B2	99	78.415	Ursus_americanus
ENSSPUG00000009198	SF3B2	85	84.100	ENSUMAG00000010994	SF3B2	100	80.200	Ursus_maritimus
ENSSPUG00000009198	SF3B2	58	94.068	ENSVPAG00000008695	SF3B2	72	94.068	Vicugna_pacos
ENSSPUG00000009198	SF3B2	85	83.837	ENSVVUG00000027029	SF3B2	100	79.978	Vulpes_vulpes
ENSSPUG00000009198	SF3B2	88	70.656	ENSXETG00000008422	sf3b2	80	81.300	Xenopus_tropicalis
ENSSPUG00000009198	SF3B2	61	88.636	ENSXCOG00000008943	sf3b2	84	79.233	Xiphophorus_couchianus
ENSSPUG00000009198	SF3B2	61	88.636	ENSXMAG00000008467	sf3b2	74	79.627	Xiphophorus_maculatus