EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000009346 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 12396 bases
Position: chrQEPC01001665.1:3561885-3574280
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000012170	RRM_1	PF00076.22	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000012976	SLIRP-201	448	-	ENSSPUP00000012170	98 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000009346	SLIRP	79	31.429	ENSSPUG00000013677	HNRNPD	60	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009346	SLIRP	76	62.162	ENSG00000119705	SLIRP	93	63.380	Homo_sapiens
ENSSPUG00000009346	SLIRP	90	57.955	ENSAPOG00000001298	slirp	86	57.955	Acanthochromis_polyacanthus
ENSSPUG00000009346	SLIRP	86	50.000	ENSAMEG00000003975	SLIRP	91	50.000	Ailuropoda_melanoleuca
ENSSPUG00000009346	SLIRP	79	67.532	ENSACIG00000023083	slirp	76	67.532	Amphilophus_citrinellus
ENSSPUG00000009346	SLIRP	79	64.935	ENSAOCG00000006342	slirp	78	64.935	Amphiprion_ocellaris
ENSSPUG00000009346	SLIRP	79	64.935	ENSAPEG00000015719	-	79	64.935	Amphiprion_percula
ENSSPUG00000009346	SLIRP	79	64.935	ENSAPEG00000015917	slirp	78	64.935	Amphiprion_percula
ENSSPUG00000009346	SLIRP	100	61.224	ENSATEG00000013525	slirp	92	61.224	Anabas_testudineus
ENSSPUG00000009346	SLIRP	76	60.811	ENSAMXG00000018693	slirp	74	60.811	Astyanax_mexicanus
ENSSPUG00000009346	SLIRP	89	56.322	ENSCJAG00000016946	SLIRP	86	55.556	Callithrix_jacchus
ENSSPUG00000009346	SLIRP	73	54.167	ENSCAFG00020015876	-	65	54.167	Canis_lupus_dingo
ENSSPUG00000009346	SLIRP	90	51.136	ENSCCAG00000030130	SLIRP	81	51.136	Cebus_capucinus
ENSSPUG00000009346	SLIRP	90	56.818	ENSCATG00000036327	SLIRP	86	58.025	Cercocebus_atys
ENSSPUG00000009346	SLIRP	76	62.162	ENSCSAG00000011736	SLIRP	80	57.955	Chlorocebus_sabaeus
ENSSPUG00000009346	SLIRP	85	61.446	ENSCPBG00000026327	SLIRP	84	61.446	Chrysemys_picta_bellii
ENSSPUG00000009346	SLIRP	68	62.687	ENSCANG00000032892	SLIRP	82	59.259	Colobus_angolensis_palliatus
ENSSPUG00000009346	SLIRP	73	52.778	ENSCGRG00001024068	Slirp	65	52.778	Cricetulus_griseus_chok1gshd
ENSSPUG00000009346	SLIRP	73	52.778	ENSCGRG00000017440	Slirp	65	52.778	Cricetulus_griseus_crigri
ENSSPUG00000009346	SLIRP	88	51.163	ENSCSEG00000015766	slirp	84	51.163	Cynoglossus_semilaevis
ENSSPUG00000009346	SLIRP	77	68.000	ENSCVAG00000012504	slirp	74	68.000	Cyprinodon_variegatus
ENSSPUG00000009346	SLIRP	88	61.798	ENSDARG00000097753	slirp	95	60.204	Danio_rerio
ENSSPUG00000009346	SLIRP	73	52.778	ENSDNOG00000007721	SLIRP	76	51.765	Dasypus_novemcinctus
ENSSPUG00000009346	SLIRP	77	49.333	ENSDORG00000012379	Slirp	68	49.333	Dipodomys_ordii
ENSSPUG00000009346	SLIRP	77	54.667	ENSETEG00000010345	SLIRP	81	51.136	Echinops_telfairi
ENSSPUG00000009346	SLIRP	76	51.351	ENSEASG00005020193	SLIRP	67	51.351	Equus_asinus_asinus
ENSSPUG00000009346	SLIRP	73	48.611	ENSEEUG00000007257	SLIRP	71	48.611	Erinaceus_europaeus
ENSSPUG00000009346	SLIRP	88	58.140	ENSELUG00000016800	slirp	81	58.140	Esox_lucius
ENSSPUG00000009346	SLIRP	69	52.941	ENSFCAG00000036326	SLIRP	69	52.941	Felis_catus
ENSSPUG00000009346	SLIRP	79	57.143	ENSFALG00000012583	SLIRP	90	53.684	Ficedula_albicollis
ENSSPUG00000009346	SLIRP	91	49.451	ENSFDAG00000008347	SLIRP	78	49.451	Fukomys_damarensis
ENSSPUG00000009346	SLIRP	60	71.186	ENSFHEG00000004709	slirp	64	71.186	Fundulus_heteroclitus
ENSSPUG00000009346	SLIRP	93	61.538	ENSGMOG00000016948	slirp	84	61.538	Gadus_morhua
ENSSPUG00000009346	SLIRP	97	57.895	ENSGALG00000031238	SLIRP	95	57.895	Gallus_gallus
ENSSPUG00000009346	SLIRP	90	62.500	ENSGAFG00000010998	slirp	86	62.500	Gambusia_affinis
ENSSPUG00000009346	SLIRP	79	59.740	ENSGACG00000020137	slirp	90	59.740	Gasterosteus_aculeatus
ENSSPUG00000009346	SLIRP	98	62.500	ENSGAGG00000009953	SLIRP	66	62.500	Gopherus_agassizii
ENSSPUG00000009346	SLIRP	72	64.789	ENSGGOG00000011059	-	86	61.728	Gorilla_gorilla
ENSSPUG00000009346	SLIRP	91	44.211	ENSHGLG00000018491	SLIRP	86	44.211	Heterocephalus_glaber_female
ENSSPUG00000009346	SLIRP	91	44.211	ENSHGLG00100014153	SLIRP	86	44.211	Heterocephalus_glaber_male
ENSSPUG00000009346	SLIRP	91	64.835	ENSHCOG00000006795	slirp	92	64.835	Hippocampus_comes
ENSSPUG00000009346	SLIRP	88	60.465	ENSIPUG00000010214	SLIRP	82	60.465	Ictalurus_punctatus
ENSSPUG00000009346	SLIRP	82	50.602	ENSSTOG00000034316	SLIRP	86	48.421	Ictidomys_tridecemlineatus
ENSSPUG00000009346	SLIRP	88	63.953	ENSKMAG00000002038	slirp	79	63.953	Kryptolebias_marmoratus
ENSSPUG00000009346	SLIRP	99	54.639	ENSLBEG00000007564	slirp	91	54.639	Labrus_bergylta
ENSSPUG00000009346	SLIRP	79	70.130	ENSLACG00000013434	SLIRP	74	70.130	Latimeria_chalumnae
ENSSPUG00000009346	SLIRP	76	62.162	ENSMFAG00000042960	SLIRP	86	58.025	Macaca_fascicularis
ENSSPUG00000009346	SLIRP	73	61.111	ENSMMUG00000029256	SLIRP	86	58.025	Macaca_mulatta
ENSSPUG00000009346	SLIRP	76	62.162	ENSMNEG00000028921	SLIRP	86	58.025	Macaca_nemestrina
ENSSPUG00000009346	SLIRP	83	58.025	ENSMLEG00000043644	SLIRP	82	58.025	Mandrillus_leucophaeus
ENSSPUG00000009346	SLIRP	90	64.773	ENSMZEG00005004617	slirp	87	64.773	Maylandia_zebra
ENSSPUG00000009346	SLIRP	73	54.167	ENSMAUG00000003857	Slirp	65	54.167	Mesocricetus_auratus
ENSSPUG00000009346	SLIRP	72	53.521	ENSMICG00000012080	SLIRP	66	53.521	Microcebus_murinus
ENSSPUG00000009346	SLIRP	77	53.333	ENSMOCG00000016019	Slirp	71	50.000	Microtus_ochrogaster
ENSSPUG00000009346	SLIRP	87	63.529	ENSMMOG00000018268	slirp	83	63.529	Mola_mola
ENSSPUG00000009346	SLIRP	71	57.143	ENSMODG00000005207	-	99	57.143	Monodelphis_domestica
ENSSPUG00000009346	SLIRP	88	72.093	ENSMALG00000012581	slirp	84	72.093	Monopterus_albus
ENSSPUG00000009346	SLIRP	78	53.947	MGP_CAROLIEiJ_G0017995	Slirp	70	53.947	Mus_caroli
ENSSPUG00000009346	SLIRP	78	53.947	ENSMUSG00000021040	Slirp	72	52.113	Mus_musculus
ENSSPUG00000009346	SLIRP	78	53.947	MGP_SPRETEiJ_G0018840	Slirp	68	53.947	Mus_spretus
ENSSPUG00000009346	SLIRP	74	50.685	ENSMLUG00000024998	-	66	50.685	Myotis_lucifugus
ENSSPUG00000009346	SLIRP	78	50.000	ENSMLUG00000029544	-	68	50.000	Myotis_lucifugus
ENSSPUG00000009346	SLIRP	90	47.191	ENSNGAG00000016363	Slirp	86	47.191	Nannospalax_galili
ENSSPUG00000009346	SLIRP	77	58.667	ENSNLEG00000032459	-	73	60.294	Nomascus_leucogenys
ENSSPUG00000009346	SLIRP	91	53.933	ENSNLEG00000027238	-	95	54.762	Nomascus_leucogenys
ENSSPUG00000009346	SLIRP	76	54.054	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSSPUG00000009346	SLIRP	90	64.773	ENSONIG00000011692	slirp	87	64.773	Oreochromis_niloticus
ENSSPUG00000009346	SLIRP	84	58.537	ENSOANG00000022366	SLIRP	74	58.537	Ornithorhynchus_anatinus
ENSSPUG00000009346	SLIRP	87	62.353	ENSORLG00000010761	slirp	64	62.353	Oryzias_latipes
ENSSPUG00000009346	SLIRP	99	56.701	ENSORLG00020022188	slirp	91	56.701	Oryzias_latipes_hni
ENSSPUG00000009346	SLIRP	87	62.353	ENSORLG00015020171	slirp	82	62.353	Oryzias_latipes_hsok
ENSSPUG00000009346	SLIRP	99	59.794	ENSOMEG00000019321	slirp	91	59.794	Oryzias_melastigma
ENSSPUG00000009346	SLIRP	72	64.789	ENSPPAG00000040710	-	86	61.728	Pan_paniscus
ENSSPUG00000009346	SLIRP	69	52.941	ENSPPRG00000014350	SLIRP	69	52.941	Panthera_pardus
ENSSPUG00000009346	SLIRP	69	52.941	ENSPTIG00000014196	SLIRP	69	52.941	Panthera_tigris_altaica
ENSSPUG00000009346	SLIRP	72	64.789	ENSPTRG00000030691	SLIRP	86	61.728	Pan_troglodytes
ENSSPUG00000009346	SLIRP	90	59.091	ENSPANG00000026323	SLIRP	86	59.259	Papio_anubis
ENSSPUG00000009346	SLIRP	86	53.571	ENSPKIG00000008831	slirp	80	53.571	Paramormyrops_kingsleyae
ENSSPUG00000009346	SLIRP	86	67.857	ENSPMGG00000010541	slirp	92	67.857	Periophthalmus_magnuspinnatus
ENSSPUG00000009346	SLIRP	78	51.316	ENSPEMG00000013234	Slirp	72	47.945	Peromyscus_maniculatus_bairdii
ENSSPUG00000009346	SLIRP	80	53.846	ENSPMAG00000009355	slirp	87	53.846	Petromyzon_marinus
ENSSPUG00000009346	SLIRP	74	58.904	ENSPCIG00000026842	-	78	58.904	Phascolarctos_cinereus
ENSSPUG00000009346	SLIRP	99	59.794	ENSPFOG00000006758	slirp	91	59.794	Poecilia_formosa
ENSSPUG00000009346	SLIRP	99	59.794	ENSPLAG00000011140	slirp	91	59.794	Poecilia_latipinna
ENSSPUG00000009346	SLIRP	99	59.794	ENSPMEG00000019535	slirp	91	59.794	Poecilia_mexicana
ENSSPUG00000009346	SLIRP	99	59.794	ENSPREG00000011673	slirp	91	59.794	Poecilia_reticulata
ENSSPUG00000009346	SLIRP	71	64.286	ENSPPYG00000006030	SLIRP	80	57.955	Pongo_abelii
ENSSPUG00000009346	SLIRP	72	53.521	ENSPCOG00000015159	SLIRP	66	53.521	Propithecus_coquereli
ENSSPUG00000009346	SLIRP	88	67.442	ENSPNAG00000008633	slirp	83	67.442	Pygocentrus_nattereri
ENSSPUG00000009346	SLIRP	84	54.878	ENSRBIG00000035817	-	78	55.294	Rhinopithecus_bieti
ENSSPUG00000009346	SLIRP	68	62.687	ENSRBIG00000032998	-	74	59.259	Rhinopithecus_bieti
ENSSPUG00000009346	SLIRP	73	59.722	ENSRBIG00000031396	-	85	55.814	Rhinopithecus_bieti
ENSSPUG00000009346	SLIRP	86	53.571	ENSRBIG00000032222	-	86	60.494	Rhinopithecus_bieti
ENSSPUG00000009346	SLIRP	72	64.789	ENSRROG00000041312	-	83	61.176	Rhinopithecus_roxellana
ENSSPUG00000009346	SLIRP	86	53.571	ENSRROG00000036656	-	86	59.259	Rhinopithecus_roxellana
ENSSPUG00000009346	SLIRP	68	64.179	ENSRROG00000017133	-	89	56.977	Rhinopithecus_roxellana
ENSSPUG00000009346	SLIRP	73	58.333	ENSRROG00000035604	-	85	54.651	Rhinopithecus_roxellana
ENSSPUG00000009346	SLIRP	81	56.962	ENSSBOG00000020014	SLIRP	84	56.962	Saimiri_boliviensis_boliviensis
ENSSPUG00000009346	SLIRP	87	58.824	ENSSFOG00015011165	slirp	82	58.824	Scleropages_formosus
ENSSPUG00000009346	SLIRP	99	46.392	ENSSMAG00000012930	slirp	91	46.392	Scophthalmus_maximus
ENSSPUG00000009346	SLIRP	99	57.732	ENSSDUG00000021883	slirp	60	57.732	Seriola_dumerili
ENSSPUG00000009346	SLIRP	99	57.732	ENSSLDG00000023136	slirp	83	57.732	Seriola_lalandi_dorsalis
ENSSPUG00000009346	SLIRP	88	59.302	ENSSPAG00000013477	slirp	82	59.302	Stegastes_partitus
ENSSPUG00000009346	SLIRP	77	50.667	ENSSSCG00000028167	SLIRP	68	50.667	Sus_scrofa
ENSSPUG00000009346	SLIRP	79	58.442	ENSTGUG00000012337	SLIRP	90	54.737	Taeniopygia_guttata
ENSSPUG00000009346	SLIRP	96	54.545	ENSTRUG00000020127	slirp	82	59.770	Takifugu_rubripes
ENSSPUG00000009346	SLIRP	87	52.941	ENSUAMG00000022445	SLIRP	76	52.941	Ursus_americanus
ENSSPUG00000009346	SLIRP	87	52.941	ENSUMAG00000007166	SLIRP	76	52.941	Ursus_maritimus
ENSSPUG00000009346	SLIRP	73	50.000	ENSVPAG00000001781	SLIRP	67	50.000	Vicugna_pacos
ENSSPUG00000009346	SLIRP	73	52.778	ENSVVUG00000004436	SLIRP	65	52.778	Vulpes_vulpes
ENSSPUG00000009346	SLIRP	87	69.412	ENSXETG00000030343	SLIRP	91	69.412	Xenopus_tropicalis
ENSSPUG00000009346	SLIRP	99	58.763	ENSXCOG00000009422	slirp	91	58.763	Xiphophorus_couchianus
ENSSPUG00000009346	SLIRP	99	58.763	ENSXMAG00000015655	slirp	91	58.763	Xiphophorus_maculatus