EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000009357 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 38898 bases
Position: chrQEPC01000155.1:1900085-1938982
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000012269	YTH	PF04146.15	1.9e-40	1	1
ENSSPUP00000012288	YTH	PF04146.15	2e-40	1	1
ENSSPUP00000012247	YTH	PF04146.15	2e-40	1	1
ENSSPUP00000012224	YTH	PF04146.15	2.1e-40	1	1
ENSSPUP00000012200	YTH	PF04146.15	2.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013057	YTHDC1-203	2584	-	ENSSPUP00000012247	676 (aa)	-	-
ENSSPUT00000013033	YTHDC1-202	2620	-	ENSSPUP00000012224	688 (aa)	-	-
ENSSPUT00000013101	YTHDC1-205	3033	-	ENSSPUP00000012288	667 (aa)	-	-
ENSSPUT00000013009	YTHDC1-201	2674	-	ENSSPUP00000012200	706 (aa)	-	-
ENSSPUT00000013081	YTHDC1-204	2530	-	ENSSPUP00000012269	658 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009357	YTHDC1	92	83.900	ENSG00000083896	YTHDC1	97	88.889	Homo_sapiens
ENSSPUG00000009357	YTHDC1	61	59.472	ENSAPOG00000013997	ythdc1	93	51.045	Acanthochromis_polyacanthus
ENSSPUG00000009357	YTHDC1	62	96.200	ENSAMEG00000005688	YTHDC1	93	82.353	Ailuropoda_melanoleuca
ENSSPUG00000009357	YTHDC1	72	58.794	ENSACIG00000019728	ythdc1	62	59.148	Amphilophus_citrinellus
ENSSPUG00000009357	YTHDC1	92	52.174	ENSAOCG00000000239	ythdc1	94	55.456	Amphiprion_ocellaris
ENSSPUG00000009357	YTHDC1	89	54.207	ENSAPEG00000000618	ythdc1	90	55.377	Amphiprion_percula
ENSSPUG00000009357	YTHDC1	53	65.642	ENSATEG00000023007	ythdc1	96	55.124	Anabas_testudineus
ENSSPUG00000009357	YTHDC1	93	90.705	ENSAPLG00000009921	YTHDC1	92	89.474	Anas_platyrhynchos
ENSSPUG00000009357	YTHDC1	94	86.562	ENSACAG00000009697	YTHDC1	93	87.462	Anolis_carolinensis
ENSSPUG00000009357	YTHDC1	91	83.309	ENSANAG00000001522	YTHDC1	93	83.186	Aotus_nancymaae
ENSSPUG00000009357	YTHDC1	61	60.092	ENSACLG00000019371	ythdc1	94	55.522	Astatotilapia_calliptera
ENSSPUG00000009357	YTHDC1	97	64.188	ENSAMXG00000006978	ythdc1	92	68.012	Astyanax_mexicanus
ENSSPUG00000009357	YTHDC1	92	83.333	ENSBTAG00000015572	YTHDC1	93	81.858	Bos_taurus
ENSSPUG00000009357	YTHDC1	92	79.545	ENSCJAG00000009934	YTHDC1	93	82.891	Callithrix_jacchus
ENSSPUG00000009357	YTHDC1	62	96.200	ENSCAFG00000002821	YTHDC1	93	82.500	Canis_familiaris
ENSSPUG00000009357	YTHDC1	62	96.200	ENSCAFG00020027112	YTHDC1	93	82.500	Canis_lupus_dingo
ENSSPUG00000009357	YTHDC1	91	77.845	ENSCHIG00000004810	YTHDC1	95	79.576	Capra_hircus
ENSSPUG00000009357	YTHDC1	92	84.047	ENSTSYG00000011668	YTHDC1	93	82.718	Carlito_syrichta
ENSSPUG00000009357	YTHDC1	89	60.130	ENSCAPG00000008722	YTHDC1	99	60.619	Cavia_aperea
ENSSPUG00000009357	YTHDC1	92	76.809	ENSCPOG00000010929	YTHDC1	92	75.332	Cavia_porcellus
ENSSPUG00000009357	YTHDC1	94	84.098	ENSCCAG00000035754	YTHDC1	93	82.544	Cebus_capucinus
ENSSPUG00000009357	YTHDC1	92	79.545	ENSCATG00000036320	YTHDC1	97	79.693	Cercocebus_atys
ENSSPUG00000009357	YTHDC1	93	82.669	ENSCLAG00000005482	YTHDC1	92	81.790	Chinchilla_lanigera
ENSSPUG00000009357	YTHDC1	62	95.962	ENSCSAG00000005252	YTHDC1	93	82.743	Chlorocebus_sabaeus
ENSSPUG00000009357	YTHDC1	52	87.692	ENSCHOG00000006136	-	80	87.692	Choloepus_hoffmanni
ENSSPUG00000009357	YTHDC1	94	90.287	ENSCPBG00000021965	YTHDC1	94	89.206	Chrysemys_picta_bellii
ENSSPUG00000009357	YTHDC1	91	83.013	ENSCANG00000004769	YTHDC1	93	82.891	Colobus_angolensis_palliatus
ENSSPUG00000009357	YTHDC1	94	81.599	ENSCGRG00001000816	Ythdc1	93	81.942	Cricetulus_griseus_chok1gshd
ENSSPUG00000009357	YTHDC1	93	82.663	ENSCGRG00000009807	Ythdc1	92	82.335	Cricetulus_griseus_crigri
ENSSPUG00000009357	YTHDC1	92	53.088	ENSCSEG00000020404	ythdc1	94	56.781	Cynoglossus_semilaevis
ENSSPUG00000009357	YTHDC1	61	59.202	ENSCVAG00000022349	ythdc1	94	54.573	Cyprinodon_variegatus
ENSSPUG00000009357	YTHDC1	97	63.278	ENSDARG00000051953	ythdc1	92	64.330	Danio_rerio
ENSSPUG00000009357	YTHDC1	94	83.975	ENSDNOG00000004949	YTHDC1	93	83.010	Dasypus_novemcinctus
ENSSPUG00000009357	YTHDC1	91	84.639	ENSDORG00000013045	Ythdc1	92	82.934	Dipodomys_ordii
ENSSPUG00000009357	YTHDC1	81	93.907	ENSETEG00000001878	YTHDC1	70	97.778	Echinops_telfairi
ENSSPUG00000009357	YTHDC1	86	84.420	ENSEASG00005018383	YTHDC1	93	82.500	Equus_asinus_asinus
ENSSPUG00000009357	YTHDC1	80	95.640	ENSECAG00000018303	YTHDC1	99	79.035	Equus_caballus
ENSSPUG00000009357	YTHDC1	62	94.774	ENSEEUG00000015466	YTHDC1	93	81.121	Erinaceus_europaeus
ENSSPUG00000009357	YTHDC1	97	60.557	ENSELUG00000014029	ythdc1	95	63.166	Esox_lucius
ENSSPUG00000009357	YTHDC1	62	96.200	ENSFCAG00000026791	YTHDC1	93	82.474	Felis_catus
ENSSPUG00000009357	YTHDC1	64	95.288	ENSFALG00000006581	YTHDC1	87	96.954	Ficedula_albicollis
ENSSPUG00000009357	YTHDC1	93	83.670	ENSFDAG00000018560	YTHDC1	92	82.556	Fukomys_damarensis
ENSSPUG00000009357	YTHDC1	62	48.936	ENSFHEG00000001286	ythdc1	54	49.165	Fundulus_heteroclitus
ENSSPUG00000009357	YTHDC1	59	72.811	ENSGMOG00000018815	ythdc1	71	76.847	Gadus_morhua
ENSSPUG00000009357	YTHDC1	93	91.186	ENSGALG00000035906	YTHDC1	88	87.723	Gallus_gallus
ENSSPUG00000009357	YTHDC1	61	62.558	ENSGACG00000015486	ythdc1	57	63.081	Gasterosteus_aculeatus
ENSSPUG00000009357	YTHDC1	94	88.941	ENSGAGG00000007108	YTHDC1	93	87.801	Gopherus_agassizii
ENSSPUG00000009357	YTHDC1	91	83.437	ENSGGOG00000021958	YTHDC1	97	79.463	Gorilla_gorilla
ENSSPUG00000009357	YTHDC1	92	52.624	ENSHBUG00000019288	ythdc1	93	55.522	Haplochromis_burtoni
ENSSPUG00000009357	YTHDC1	94	66.349	ENSHGLG00000003239	-	86	66.871	Heterocephalus_glaber_female
ENSSPUG00000009357	YTHDC1	94	83.005	ENSHGLG00000006319	-	93	81.791	Heterocephalus_glaber_female
ENSSPUG00000009357	YTHDC1	94	64.771	ENSHGLG00100008060	-	86	65.344	Heterocephalus_glaber_male
ENSSPUG00000009357	YTHDC1	94	83.053	ENSHGLG00100001556	-	93	81.832	Heterocephalus_glaber_male
ENSSPUG00000009357	YTHDC1	71	65.957	ENSHCOG00000001520	ythdc1	88	65.957	Hippocampus_comes
ENSSPUG00000009357	YTHDC1	97	66.818	ENSIPUG00000018136	ythdc1	92	67.411	Ictalurus_punctatus
ENSSPUG00000009357	YTHDC1	62	94.172	ENSSTOG00000013652	YTHDC1	93	81.924	Ictidomys_tridecemlineatus
ENSSPUG00000009357	YTHDC1	62	93.473	ENSJJAG00000010268	Ythdc1	93	81.642	Jaculus_jaculus
ENSSPUG00000009357	YTHDC1	62	60.181	ENSKMAG00000006483	ythdc1	85	65.450	Kryptolebias_marmoratus
ENSSPUG00000009357	YTHDC1	65	69.767	ENSLBEG00000020831	ythdc1	72	69.767	Labrus_bergylta
ENSSPUG00000009357	YTHDC1	91	73.028	ENSLACG00000004893	YTHDC1	92	73.028	Latimeria_chalumnae
ENSSPUG00000009357	YTHDC1	94	70.904	ENSLOCG00000003045	ythdc1	92	71.277	Lepisosteus_oculatus
ENSSPUG00000009357	YTHDC1	94	83.435	ENSLAFG00000021592	YTHDC1	99	80.034	Loxodonta_africana
ENSSPUG00000009357	YTHDC1	91	83.013	ENSMFAG00000031927	YTHDC1	96	79.502	Macaca_fascicularis
ENSSPUG00000009357	YTHDC1	91	83.742	ENSMMUG00000002265	YTHDC1	93	82.891	Macaca_mulatta
ENSSPUG00000009357	YTHDC1	91	83.013	ENSMNEG00000033751	YTHDC1	93	82.891	Macaca_nemestrina
ENSSPUG00000009357	YTHDC1	91	83.013	ENSMLEG00000042147	YTHDC1	93	82.891	Mandrillus_leucophaeus
ENSSPUG00000009357	YTHDC1	57	62.350	ENSMAMG00000013122	ythdc1	92	55.909	Mastacembelus_armatus
ENSSPUG00000009357	YTHDC1	61	60.092	ENSMZEG00005023173	ythdc1	93	55.522	Maylandia_zebra
ENSSPUG00000009357	YTHDC1	94	90.536	ENSMGAG00000010391	YTHDC1	92	89.024	Meleagris_gallopavo
ENSSPUG00000009357	YTHDC1	94	81.297	ENSMAUG00000001286	Ythdc1	93	81.791	Mesocricetus_auratus
ENSSPUG00000009357	YTHDC1	94	84.266	ENSMICG00000034640	YTHDC1	93	82.430	Microcebus_murinus
ENSSPUG00000009357	YTHDC1	94	82.451	ENSMOCG00000020201	Ythdc1	93	81.845	Microtus_ochrogaster
ENSSPUG00000009357	YTHDC1	52	60.234	ENSMODG00000004117	-	92	62.342	Monodelphis_domestica
ENSSPUG00000009357	YTHDC1	94	85.714	ENSMODG00000020754	-	92	87.557	Monodelphis_domestica
ENSSPUG00000009357	YTHDC1	96	50.000	ENSMODG00000010076	-	76	62.651	Monodelphis_domestica
ENSSPUG00000009357	YTHDC1	96	57.433	ENSMODG00000014337	-	94	69.192	Monodelphis_domestica
ENSSPUG00000009357	YTHDC1	69	57.082	ENSMODG00000009173	-	84	61.013	Monodelphis_domestica
ENSSPUG00000009357	YTHDC1	55	66.398	ENSMALG00000013412	ythdc1	94	57.268	Monopterus_albus
ENSSPUG00000009357	YTHDC1	94	83.359	MGP_CAROLIEiJ_G0027347	Ythdc1	93	82.275	Mus_caroli
ENSSPUG00000009357	YTHDC1	94	83.079	ENSMUSG00000035851	Ythdc1	93	81.858	Mus_musculus
ENSSPUG00000009357	YTHDC1	94	83.384	MGP_PahariEiJ_G0017126	Ythdc1	93	82.006	Mus_pahari
ENSSPUG00000009357	YTHDC1	94	83.384	MGP_SPRETEiJ_G0028339	Ythdc1	93	82.153	Mus_spretus
ENSSPUG00000009357	YTHDC1	75	91.530	ENSMPUG00000001743	YTHDC1	59	95.640	Mustela_putorius_furo
ENSSPUG00000009357	YTHDC1	93	83.333	ENSMLUG00000016300	YTHDC1	92	82.229	Myotis_lucifugus
ENSSPUG00000009357	YTHDC1	62	72.109	ENSNGAG00000024000	Ythdc1	93	72.577	Nannospalax_galili
ENSSPUG00000009357	YTHDC1	61	59.953	ENSNBRG00000007663	ythdc1	70	66.000	Neolamprologus_brichardi
ENSSPUG00000009357	YTHDC1	93	82.263	ENSNLEG00000009202	YTHDC1	96	78.887	Nomascus_leucogenys
ENSSPUG00000009357	YTHDC1	73	81.728	ENSMEUG00000007128	YTHDC1	68	81.728	Notamacropus_eugenii
ENSSPUG00000009357	YTHDC1	81	96.901	ENSOPRG00000008986	YTHDC1	74	96.901	Ochotona_princeps
ENSSPUG00000009357	YTHDC1	94	83.717	ENSODEG00000001715	YTHDC1	93	82.467	Octodon_degus
ENSSPUG00000009357	YTHDC1	92	52.924	ENSONIG00000012651	ythdc1	90	67.391	Oreochromis_niloticus
ENSSPUG00000009357	YTHDC1	78	89.305	ENSOANG00000014398	YTHDC1	69	93.182	Ornithorhynchus_anatinus
ENSSPUG00000009357	YTHDC1	87	96.254	ENSOCUG00000015886	YTHDC1	70	96.221	Oryctolagus_cuniculus
ENSSPUG00000009357	YTHDC1	92	53.253	ENSORLG00000030544	ythdc1	94	56.175	Oryzias_latipes
ENSSPUG00000009357	YTHDC1	92	52.402	ENSORLG00020019316	ythdc1	94	55.789	Oryzias_latipes_hni
ENSSPUG00000009357	YTHDC1	61	60.460	ENSOMEG00000000551	ythdc1	94	54.421	Oryzias_melastigma
ENSSPUG00000009357	YTHDC1	92	84.047	ENSOGAG00000003362	YTHDC1	93	82.718	Otolemur_garnettii
ENSSPUG00000009357	YTHDC1	92	83.333	ENSOARG00000008633	YTHDC1	93	81.858	Ovis_aries
ENSSPUG00000009357	YTHDC1	92	83.915	ENSPPAG00000041315	YTHDC1	97	80.385	Pan_paniscus
ENSSPUG00000009357	YTHDC1	92	80.495	ENSPPRG00000011979	YTHDC1	93	81.368	Panthera_pardus
ENSSPUG00000009357	YTHDC1	90	76.071	ENSPTIG00000015527	YTHDC1	93	81.093	Panthera_tigris_altaica
ENSSPUG00000009357	YTHDC1	92	83.915	ENSPTRG00000016105	YTHDC1	97	80.385	Pan_troglodytes
ENSSPUG00000009357	YTHDC1	92	82.794	ENSPANG00000021590	YTHDC1	96	79.541	Papio_anubis
ENSSPUG00000009357	YTHDC1	97	67.976	ENSPKIG00000018497	ythdc1	81	81.733	Paramormyrops_kingsleyae
ENSSPUG00000009357	YTHDC1	93	90.880	ENSPSIG00000002782	YTHDC1	92	89.645	Pelodiscus_sinensis
ENSSPUG00000009357	YTHDC1	52	75.000	ENSPMGG00000000970	-	62	75.000	Periophthalmus_magnuspinnatus
ENSSPUG00000009357	YTHDC1	91	84.301	ENSPEMG00000013850	Ythdc1	92	82.309	Peromyscus_maniculatus_bairdii
ENSSPUG00000009357	YTHDC1	94	85.243	ENSPCIG00000006870	YTHDC1	92	87.102	Phascolarctos_cinereus
ENSSPUG00000009357	YTHDC1	61	59.292	ENSPFOG00000013404	ythdc1	94	54.586	Poecilia_formosa
ENSSPUG00000009357	YTHDC1	61	59.292	ENSPLAG00000011079	ythdc1	85	65.602	Poecilia_latipinna
ENSSPUG00000009357	YTHDC1	61	59.292	ENSPMEG00000009238	ythdc1	94	54.449	Poecilia_mexicana
ENSSPUG00000009357	YTHDC1	61	59.809	ENSPREG00000016973	ythdc1	93	50.926	Poecilia_reticulata
ENSSPUG00000009357	YTHDC1	79	86.059	ENSPPYG00000014726	YTHDC1	91	84.165	Pongo_abelii
ENSSPUG00000009357	YTHDC1	78	89.163	ENSPCAG00000009607	YTHDC1	77	87.838	Procavia_capensis
ENSSPUG00000009357	YTHDC1	94	79.728	ENSPCOG00000019105	YTHDC1	92	78.662	Propithecus_coquereli
ENSSPUG00000009357	YTHDC1	62	92.874	ENSPVAG00000015551	YTHDC1	93	80.323	Pteropus_vampyrus
ENSSPUG00000009357	YTHDC1	61	60.092	ENSPNYG00000011687	ythdc1	94	55.522	Pundamilia_nyererei
ENSSPUG00000009357	YTHDC1	97	68.477	ENSPNAG00000028365	ythdc1	93	69.424	Pygocentrus_nattereri
ENSSPUG00000009357	YTHDC1	62	93.706	ENSRNOG00000001996	Ythdc1	93	80.233	Rattus_norvegicus
ENSSPUG00000009357	YTHDC1	92	82.280	ENSRBIG00000028279	YTHDC1	96	78.887	Rhinopithecus_bieti
ENSSPUG00000009357	YTHDC1	91	83.013	ENSRROG00000035028	YTHDC1	93	82.891	Rhinopithecus_roxellana
ENSSPUG00000009357	YTHDC1	91	83.013	ENSSBOG00000022353	YTHDC1	96	79.502	Saimiri_boliviensis_boliviensis
ENSSPUG00000009357	YTHDC1	94	84.929	ENSSHAG00000002538	YTHDC1	91	88.795	Sarcophilus_harrisii
ENSSPUG00000009357	YTHDC1	97	69.665	ENSSFOG00015003298	ythdc1	93	70.359	Scleropages_formosus
ENSSPUG00000009357	YTHDC1	92	52.722	ENSSMAG00000009086	ythdc1	94	55.105	Scophthalmus_maximus
ENSSPUG00000009357	YTHDC1	57	61.259	ENSSDUG00000022008	ythdc1	94	55.687	Seriola_dumerili
ENSSPUG00000009357	YTHDC1	57	61.259	ENSSLDG00000007926	ythdc1	94	55.539	Seriola_lalandi_dorsalis
ENSSPUG00000009357	YTHDC1	62	95.724	ENSSARG00000010960	YTHDC1	91	85.905	Sorex_araneus
ENSSPUG00000009357	YTHDC1	61	62.156	ENSSPAG00000011449	ythdc1	94	56.047	Stegastes_partitus
ENSSPUG00000009357	YTHDC1	62	95.724	ENSSSCG00000035505	YTHDC1	93	80.870	Sus_scrofa
ENSSPUG00000009357	YTHDC1	94	90.063	ENSTGUG00000004452	-	92	88.567	Taeniopygia_guttata
ENSSPUG00000009357	YTHDC1	59	69.444	ENSTRUG00000010142	ythdc1	67	69.444	Takifugu_rubripes
ENSSPUG00000009357	YTHDC1	92	51.493	ENSTNIG00000013243	ythdc1	62	65.116	Tetraodon_nigroviridis
ENSSPUG00000009357	YTHDC1	94	77.090	ENSTBEG00000011546	YTHDC1	92	78.892	Tupaia_belangeri
ENSSPUG00000009357	YTHDC1	62	95.249	ENSTTRG00000005083	YTHDC1	93	81.176	Tursiops_truncatus
ENSSPUG00000009357	YTHDC1	89	84.395	ENSUAMG00000010388	YTHDC1	92	82.643	Ursus_americanus
ENSSPUG00000009357	YTHDC1	99	78.603	ENSUMAG00000013668	YTHDC1	98	78.267	Ursus_maritimus
ENSSPUG00000009357	YTHDC1	92	83.562	ENSVPAG00000009040	YTHDC1	92	82.192	Vicugna_pacos
ENSSPUG00000009357	YTHDC1	91	79.887	ENSVVUG00000005387	YTHDC1	92	82.830	Vulpes_vulpes
ENSSPUG00000009357	YTHDC1	94	75.781	ENSXETG00000017960	ythdc1	93	75.680	Xenopus_tropicalis
ENSSPUG00000009357	YTHDC1	61	59.071	ENSXMAG00000005196	ythdc1	94	54.354	Xiphophorus_maculatus