EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000009732 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 447824 bases
Position: chrQEPC01007654.1:624557-1072380
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000012651	Fox-1_C	PF12414.8	3.3e-32	1	1
ENSSPUP00000012651	RRM_1	PF00076.22	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013489	RBFOX1-201	1068	-	ENSSPUP00000012651	355 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000009732	RBFOX1	83	71.803	ENSSPUG00000011733	RBFOX3	99	74.132
ENSSPUG00000009732	RBFOX1	67	68.266	ENSSPUG00000011797	RBFOX2	75	66.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009732	RBFOX1	87	89.776	ENSG00000078328	RBFOX1	88	92.941	Homo_sapiens
ENSSPUG00000009732	RBFOX1	87	77.273	ENSAPOG00000003197	rbfox1	84	76.970	Acanthochromis_polyacanthus
ENSSPUG00000009732	RBFOX1	59	92.308	ENSAMEG00000008605	RBFOX1	82	92.308	Ailuropoda_melanoleuca
ENSSPUG00000009732	RBFOX1	68	67.766	ENSACIG00000005478	rbfox1	78	61.290	Amphilophus_citrinellus
ENSSPUG00000009732	RBFOX1	68	78.599	ENSAOCG00000008283	rbfox1	87	78.210	Amphiprion_ocellaris
ENSSPUG00000009732	RBFOX1	89	68.047	ENSAPEG00000010636	rbfox1	92	67.647	Amphiprion_percula
ENSSPUG00000009732	RBFOX1	68	76.834	ENSATEG00000007513	rbfox1	87	76.448	Anabas_testudineus
ENSSPUG00000009732	RBFOX1	87	85.588	ENSAPLG00000013263	RBFOX1	84	83.529	Anas_platyrhynchos
ENSSPUG00000009732	RBFOX1	87	80.758	ENSACAG00000004013	RBFOX1	85	80.758	Anolis_carolinensis
ENSSPUG00000009732	RBFOX1	100	77.778	ENSANAG00000029527	RBFOX1	83	89.776	Aotus_nancymaae
ENSSPUG00000009732	RBFOX1	59	90.865	ENSAMXG00000002431	rbfox1	60	90.865	Astyanax_mexicanus
ENSSPUG00000009732	RBFOX1	87	81.818	ENSBTAG00000007210	RBFOX1	85	81.818	Bos_taurus
ENSSPUG00000009732	RBFOX1	87	89.809	ENSCJAG00000017351	RBFOX1	80	89.809	Callithrix_jacchus
ENSSPUG00000009732	RBFOX1	87	82.698	ENSCAFG00000019082	RBFOX1	81	82.698	Canis_familiaris
ENSSPUG00000009732	RBFOX1	65	84.556	ENSCAFG00020024881	RBFOX1	72	84.556	Canis_lupus_dingo
ENSSPUG00000009732	RBFOX1	87	82.405	ENSCHIG00000023549	RBFOX1	85	82.405	Capra_hircus
ENSSPUG00000009732	RBFOX1	87	89.776	ENSTSYG00000005334	RBFOX1	86	89.776	Carlito_syrichta
ENSSPUG00000009732	RBFOX1	87	81.818	ENSCAPG00000017669	RBFOX1	87	81.765	Cavia_aperea
ENSSPUG00000009732	RBFOX1	87	81.818	ENSCPOG00000011314	RBFOX1	86	81.765	Cavia_porcellus
ENSSPUG00000009732	RBFOX1	87	89.776	ENSCCAG00000023031	RBFOX1	83	89.776	Cebus_capucinus
ENSSPUG00000009732	RBFOX1	87	89.776	ENSCATG00000033816	RBFOX1	83	89.776	Cercocebus_atys
ENSSPUG00000009732	RBFOX1	87	81.818	ENSCLAG00000012761	RBFOX1	85	81.765	Chinchilla_lanigera
ENSSPUG00000009732	RBFOX1	93	74.309	ENSCSAG00000008739	RBFOX1	85	80.435	Chlorocebus_sabaeus
ENSSPUG00000009732	RBFOX1	61	92.000	ENSCHOG00000012843	RBFOX1	51	92.000	Choloepus_hoffmanni
ENSSPUG00000009732	RBFOX1	87	93.291	ENSCPBG00000026626	RBFOX1	85	85.630	Chrysemys_picta_bellii
ENSSPUG00000009732	RBFOX1	87	89.776	ENSCANG00000033125	RBFOX1	83	89.776	Colobus_angolensis_palliatus
ENSSPUG00000009732	RBFOX1	87	82.405	ENSCGRG00001013729	Rbfox1	85	82.353	Cricetulus_griseus_chok1gshd
ENSSPUG00000009732	RBFOX1	87	82.405	ENSCGRG00000003272	Rbfox1	85	82.353	Cricetulus_griseus_crigri
ENSSPUG00000009732	RBFOX1	87	71.171	ENSCSEG00000008840	rbfox1	89	69.369	Cynoglossus_semilaevis
ENSSPUG00000009732	RBFOX1	87	83.439	ENSDARG00000014746	rbfox1	100	86.538	Danio_rerio
ENSSPUG00000009732	RBFOX1	87	82.353	ENSDNOG00000043612	RBFOX1	81	82.353	Dasypus_novemcinctus
ENSSPUG00000009732	RBFOX1	87	80.175	ENSDORG00000010024	Rbfox1	87	80.175	Dipodomys_ordii
ENSSPUG00000009732	RBFOX1	87	68.035	ENSETEG00000003771	RBFOX1	81	68.035	Echinops_telfairi
ENSSPUG00000009732	RBFOX1	87	83.901	ENSEASG00005011599	RBFOX1	85	82.698	Equus_asinus_asinus
ENSSPUG00000009732	RBFOX1	87	83.901	ENSECAG00000012667	RBFOX1	85	80.435	Equus_caballus
ENSSPUG00000009732	RBFOX1	68	70.833	ENSELUG00000013096	rbfox1	78	71.176	Esox_lucius
ENSSPUG00000009732	RBFOX1	87	89.776	ENSFCAG00000025322	RBFOX1	76	89.776	Felis_catus
ENSSPUG00000009732	RBFOX1	80	84.395	ENSFALG00000004027	RBFOX1	93	84.395	Ficedula_albicollis
ENSSPUG00000009732	RBFOX1	87	82.405	ENSFDAG00000007388	RBFOX1	85	82.353	Fukomys_damarensis
ENSSPUG00000009732	RBFOX1	93	82.934	ENSGALG00000034325	RBFOX1	81	85.924	Gallus_gallus
ENSSPUG00000009732	RBFOX1	87	92.994	ENSGAGG00000023681	RBFOX1	80	92.994	Gopherus_agassizii
ENSSPUG00000009732	RBFOX1	87	89.776	ENSGGOG00000016871	-	83	89.776	Gorilla_gorilla
ENSSPUG00000009732	RBFOX1	87	82.111	ENSHGLG00000016944	RBFOX1	85	82.059	Heterocephalus_glaber_female
ENSSPUG00000009732	RBFOX1	87	82.111	ENSHGLG00100003272	RBFOX1	85	82.059	Heterocephalus_glaber_male
ENSSPUG00000009732	RBFOX1	87	77.500	ENSHCOG00000016419	rbfox1	91	77.500	Hippocampus_comes
ENSSPUG00000009732	RBFOX1	87	85.437	ENSIPUG00000015215	rbfox1	89	85.304	Ictalurus_punctatus
ENSSPUG00000009732	RBFOX1	87	82.111	ENSSTOG00000000322	RBFOX1	86	82.059	Ictidomys_tridecemlineatus
ENSSPUG00000009732	RBFOX1	87	79.179	ENSJJAG00000002575	Rbfox1	84	79.118	Jaculus_jaculus
ENSSPUG00000009732	RBFOX1	88	74.096	ENSLBEG00000014659	rbfox1	92	74.096	Labrus_bergylta
ENSSPUG00000009732	RBFOX1	87	82.799	ENSLOCG00000006675	rbfox1	85	82.799	Lepisosteus_oculatus
ENSSPUG00000009732	RBFOX1	66	81.343	ENSLAFG00000011480	RBFOX1	87	81.343	Loxodonta_africana
ENSSPUG00000009732	RBFOX1	87	90.096	ENSMFAG00000036447	RBFOX1	83	90.096	Macaca_fascicularis
ENSSPUG00000009732	RBFOX1	87	90.096	ENSMMUG00000003458	RBFOX1	83	90.096	Macaca_mulatta
ENSSPUG00000009732	RBFOX1	99	77.528	ENSMNEG00000032034	RBFOX1	84	82.647	Macaca_nemestrina
ENSSPUG00000009732	RBFOX1	87	89.776	ENSMLEG00000015382	RBFOX1	83	89.776	Mandrillus_leucophaeus
ENSSPUG00000009732	RBFOX1	87	74.085	ENSMAMG00000003142	rbfox1	87	77.647	Mastacembelus_armatus
ENSSPUG00000009732	RBFOX1	69	87.500	ENSMGAG00000008606	RBFOX1	92	87.500	Meleagris_gallopavo
ENSSPUG00000009732	RBFOX1	87	89.137	ENSMICG00000034286	RBFOX1	83	89.137	Microcebus_murinus
ENSSPUG00000009732	RBFOX1	87	82.405	ENSMOCG00000020932	Rbfox1	88	82.353	Microtus_ochrogaster
ENSSPUG00000009732	RBFOX1	90	78.438	ENSMMOG00000009716	rbfox1	88	77.812	Mola_mola
ENSSPUG00000009732	RBFOX1	93	76.177	ENSMODG00000005826	RBFOX1	90	82.298	Monodelphis_domestica
ENSSPUG00000009732	RBFOX1	87	76.543	ENSMALG00000003337	rbfox1	84	76.543	Monopterus_albus
ENSSPUG00000009732	RBFOX1	99	71.466	MGP_CAROLIEiJ_G0020427	Rbfox1	85	82.647	Mus_caroli
ENSSPUG00000009732	RBFOX1	87	83.851	ENSMUSG00000008658	Rbfox1	91	84.270	Mus_musculus
ENSSPUG00000009732	RBFOX1	99	71.466	MGP_PahariEiJ_G0016135	Rbfox1	85	82.647	Mus_pahari
ENSSPUG00000009732	RBFOX1	99	70.942	MGP_SPRETEiJ_G0021321	Rbfox1	85	82.059	Mus_spretus
ENSSPUG00000009732	RBFOX1	93	74.309	ENSMPUG00000014822	RBFOX1	81	80.435	Mustela_putorius_furo
ENSSPUG00000009732	RBFOX1	66	81.273	ENSMLUG00000015896	RBFOX1	87	78.652	Myotis_lucifugus
ENSSPUG00000009732	RBFOX1	87	82.698	ENSNGAG00000023276	Rbfox1	87	82.647	Nannospalax_galili
ENSSPUG00000009732	RBFOX1	87	60.116	ENSNBRG00000011084	rbfox1	81	60.116	Neolamprologus_brichardi
ENSSPUG00000009732	RBFOX1	87	89.457	ENSNLEG00000010017	-	83	89.457	Nomascus_leucogenys
ENSSPUG00000009732	RBFOX1	66	95.673	ENSMEUG00000012525	RBFOX1	55	95.673	Notamacropus_eugenii
ENSSPUG00000009732	RBFOX1	87	81.818	ENSODEG00000013166	RBFOX1	85	81.765	Octodon_degus
ENSSPUG00000009732	RBFOX1	93	75.967	ENSOANG00000002379	RBFOX1	85	82.298	Ornithorhynchus_anatinus
ENSSPUG00000009732	RBFOX1	59	92.788	ENSOCUG00000001205	-	91	92.788	Oryctolagus_cuniculus
ENSSPUG00000009732	RBFOX1	87	82.059	ENSOGAG00000025535	RBFOX1	85	82.059	Otolemur_garnettii
ENSSPUG00000009732	RBFOX1	59	80.769	ENSOARG00000005135	RBFOX1	79	80.769	Ovis_aries
ENSSPUG00000009732	RBFOX1	87	89.776	ENSPPAG00000036238	-	86	89.776	Pan_paniscus
ENSSPUG00000009732	RBFOX1	87	89.776	ENSPPRG00000006546	RBFOX1	83	89.776	Panthera_pardus
ENSSPUG00000009732	RBFOX1	87	75.549	ENSPTIG00000021154	RBFOX1	85	74.922	Panthera_tigris_altaica
ENSSPUG00000009732	RBFOX1	87	89.776	ENSPTRG00000007744	RBFOX1	83	89.776	Pan_troglodytes
ENSSPUG00000009732	RBFOX1	87	89.776	ENSPANG00000026500	RBFOX1	83	89.776	Papio_anubis
ENSSPUG00000009732	RBFOX1	87	86.349	ENSPKIG00000009667	-	87	86.984	Paramormyrops_kingsleyae
ENSSPUG00000009732	RBFOX1	68	93.750	ENSPKIG00000019353	rbfox1	77	93.750	Paramormyrops_kingsleyae
ENSSPUG00000009732	RBFOX1	87	85.588	ENSPSIG00000006523	RBFOX1	84	83.529	Pelodiscus_sinensis
ENSSPUG00000009732	RBFOX1	87	82.698	ENSPEMG00000017607	Rbfox1	85	82.647	Peromyscus_maniculatus_bairdii
ENSSPUG00000009732	RBFOX1	62	81.301	ENSPCIG00000026887	RBFOX1	86	80.488	Phascolarctos_cinereus
ENSSPUG00000009732	RBFOX1	93	74.309	ENSPPYG00000007079	-	81	80.435	Pongo_abelii
ENSSPUG00000009732	RBFOX1	87	74.780	ENSPCAG00000002630	RBFOX1	89	74.780	Procavia_capensis
ENSSPUG00000009732	RBFOX1	87	89.137	ENSPCOG00000025687	RBFOX1	83	89.137	Propithecus_coquereli
ENSSPUG00000009732	RBFOX1	87	78.299	ENSPVAG00000013467	RBFOX1	81	78.299	Pteropus_vampyrus
ENSSPUG00000009732	RBFOX1	87	83.333	ENSPNAG00000023109	rbfox1	89	83.333	Pygocentrus_nattereri
ENSSPUG00000009732	RBFOX1	87	82.353	ENSRNOG00000002827	Rbfox1	85	80.186	Rattus_norvegicus
ENSSPUG00000009732	RBFOX1	87	89.776	ENSRBIG00000044478	RBFOX1	86	89.776	Rhinopithecus_bieti
ENSSPUG00000009732	RBFOX1	87	89.776	ENSRROG00000044411	RBFOX1	83	89.776	Rhinopithecus_roxellana
ENSSPUG00000009732	RBFOX1	87	90.415	ENSSBOG00000033726	RBFOX1	83	90.415	Saimiri_boliviensis_boliviensis
ENSSPUG00000009732	RBFOX1	93	82.687	ENSSHAG00000009257	RBFOX1	89	90.203	Sarcophilus_harrisii
ENSSPUG00000009732	RBFOX1	87	76.774	ENSSFOG00015023675	rbfox1	82	76.375	Scleropages_formosus
ENSSPUG00000009732	RBFOX1	95	76.218	ENSSFOG00015009955	-	84	79.331	Scleropages_formosus
ENSSPUG00000009732	RBFOX1	87	76.596	ENSSMAG00000015505	rbfox1	91	76.061	Scophthalmus_maximus
ENSSPUG00000009732	RBFOX1	87	79.487	ENSSDUG00000016413	rbfox1	84	78.846	Seriola_dumerili
ENSSPUG00000009732	RBFOX1	87	79.553	ENSSLDG00000009353	rbfox1	88	78.914	Seriola_lalandi_dorsalis
ENSSPUG00000009732	RBFOX1	87	79.421	ENSSPAG00000009723	rbfox1	85	78.914	Stegastes_partitus
ENSSPUG00000009732	RBFOX1	99	71.279	ENSSSCG00000007917	RBFOX1	90	79.814	Sus_scrofa
ENSSPUG00000009732	RBFOX1	87	85.588	ENSTGUG00000004562	RBFOX1	87	85.588	Taeniopygia_guttata
ENSSPUG00000009732	RBFOX1	87	76.220	ENSTRUG00000020940	rbfox1	91	75.684	Takifugu_rubripes
ENSSPUG00000009732	RBFOX1	66	59.028	ENSTNIG00000002567	rbfox1	72	87.234	Tetraodon_nigroviridis
ENSSPUG00000009732	RBFOX1	87	81.818	ENSTTRG00000005700	RBFOX1	81	81.818	Tursiops_truncatus
ENSSPUG00000009732	RBFOX1	93	79.154	ENSUAMG00000024633	RBFOX1	88	83.019	Ursus_americanus
ENSSPUG00000009732	RBFOX1	87	78.526	ENSUMAG00000003579	RBFOX1	84	79.032	Ursus_maritimus
ENSSPUG00000009732	RBFOX1	66	80.970	ENSVPAG00000001284	RBFOX1	64	80.970	Vicugna_pacos
ENSSPUG00000009732	RBFOX1	87	90.096	ENSVVUG00000017311	RBFOX1	71	95.219	Vulpes_vulpes