EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000009820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 36438 bases
Position: chrQEPC01008752.1:2329693-2366130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000012763	RRM_5	PF13893.6	1.4e-07	1	1
ENSSPUP00000012763	RRM_1	PF00076.22	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013609	-	2901	-	ENSSPUP00000012763	803 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000009820	-	61	74.795	ENSSPUG00000009747	-	59	72.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009820	-	99	62.162	ENSG00000160633	SAFB	82	59.227	Homo_sapiens
ENSSPUG00000009820	-	94	47.698	ENSAPOG00000022508	safb	51	42.248	Acanthochromis_polyacanthus
ENSSPUG00000009820	-	94	44.968	ENSACIG00000006247	safb	56	42.910	Amphilophus_citrinellus
ENSSPUG00000009820	-	94	48.271	ENSAOCG00000006308	safb	53	43.893	Amphiprion_ocellaris
ENSSPUG00000009820	-	94	48.656	ENSAPEG00000023342	safb	51	44.466	Amphiprion_percula
ENSSPUG00000009820	-	99	46.259	ENSATEG00000004998	safb	51	42.495	Anabas_testudineus
ENSSPUG00000009820	-	98	69.735	ENSAPLG00000005780	-	87	67.591	Anas_platyrhynchos
ENSSPUG00000009820	-	98	75.063	ENSAPLG00000006355	-	91	74.149	Anas_platyrhynchos
ENSSPUG00000009820	-	86	55.895	ENSACAG00000016893	-	65	49.533	Anolis_carolinensis
ENSSPUG00000009820	-	99	61.794	ENSANAG00000028821	SAFB	82	58.853	Aotus_nancymaae
ENSSPUG00000009820	-	71	56.143	ENSAMXG00000018154	safb	50	43.411	Astyanax_mexicanus
ENSSPUG00000009820	-	99	60.848	ENSCHIG00000007262	SAFB	53	55.233	Capra_hircus
ENSSPUG00000009820	-	84	63.580	ENSCAPG00000012121	SAFB	86	63.580	Cavia_aperea
ENSSPUG00000009820	-	64	53.321	ENSCPOG00000026322	SAFB	54	52.593	Cavia_porcellus
ENSSPUG00000009820	-	99	62.162	ENSCATG00000029994	SAFB	82	59.102	Cercocebus_atys
ENSSPUG00000009820	-	99	60.073	ENSCLAG00000007734	SAFB	82	58.537	Chinchilla_lanigera
ENSSPUG00000009820	-	99	62.162	ENSCSAG00000009949	SAFB	82	59.102	Chlorocebus_sabaeus
ENSSPUG00000009820	-	90	57.629	ENSCHOG00000003208	SAFB	81	55.495	Choloepus_hoffmanni
ENSSPUG00000009820	-	98	72.096	ENSCPBG00000010928	-	89	70.455	Chrysemys_picta_bellii
ENSSPUG00000009820	-	98	81.313	ENSCPBG00000010936	-	89	80.682	Chrysemys_picta_bellii
ENSSPUG00000009820	-	95	64.804	ENSCANG00000004774	-	79	68.263	Colobus_angolensis_palliatus
ENSSPUG00000009820	-	99	58.281	ENSCANG00000019754	-	52	54.070	Colobus_angolensis_palliatus
ENSSPUG00000009820	-	64	51.481	ENSCGRG00001002254	Safb	54	49.534	Cricetulus_griseus_chok1gshd
ENSSPUG00000009820	-	64	51.481	ENSCGRG00000011529	Safb	56	49.534	Cricetulus_griseus_crigri
ENSSPUG00000009820	-	97	47.014	ENSDARG00000020467	safb	51	43.529	Danio_rerio
ENSSPUG00000009820	-	99	60.859	ENSDNOG00000015746	SAFB	70	57.418	Dasypus_novemcinctus
ENSSPUG00000009820	-	64	54.766	ENSDORG00000016200	Safb	55	52.908	Dipodomys_ordii
ENSSPUG00000009820	-	75	64.130	ENSETEG00000018679	SAFB	71	61.321	Echinops_telfairi
ENSSPUG00000009820	-	99	58.437	ENSEASG00005023019	SAFB	84	53.301	Equus_asinus_asinus
ENSSPUG00000009820	-	99	47.713	ENSELUG00000022327	safb	54	43.992	Esox_lucius
ENSSPUG00000009820	-	99	61.146	ENSFCAG00000011835	SAFB	53	55.985	Felis_catus
ENSSPUG00000009820	-	98	68.892	ENSFALG00000013882	-	75	67.254	Ficedula_albicollis
ENSSPUG00000009820	-	97	78.827	ENSFALG00000013881	-	90	77.904	Ficedula_albicollis
ENSSPUG00000009820	-	93	64.198	ENSFDAG00000020306	SAFB	80	64.198	Fukomys_damarensis
ENSSPUG00000009820	-	98	43.941	ENSGMOG00000014280	safb	53	41.231	Gadus_morhua
ENSSPUG00000009820	-	98	70.618	ENSGALG00000013365	-	81	67.718	Gallus_gallus
ENSSPUG00000009820	-	98	80.328	ENSGALG00000001948	-	82	79.697	Gallus_gallus
ENSSPUG00000009820	-	98	47.837	ENSGACG00000011385	safb	52	42.720	Gasterosteus_aculeatus
ENSSPUG00000009820	-	98	81.944	ENSGAGG00000008424	-	86	81.944	Gopherus_agassizii
ENSSPUG00000009820	-	77	68.116	ENSGAGG00000017702	-	90	70.673	Gopherus_agassizii
ENSSPUG00000009820	-	99	62.285	ENSGGOG00000015109	SAFB	82	59.227	Gorilla_gorilla
ENSSPUG00000009820	-	64	55.701	ENSHGLG00000015883	SAFB	53	54.887	Heterocephalus_glaber_female
ENSSPUG00000009820	-	85	67.665	ENSHGLG00100004228	SAFB	58	54.887	Heterocephalus_glaber_male
ENSSPUG00000009820	-	69	56.063	ENSIPUG00000024869	safb2	50	43.053	Ictalurus_punctatus
ENSSPUG00000009820	-	64	57.223	ENSSTOG00000002783	SAFB	57	55.094	Ictidomys_tridecemlineatus
ENSSPUG00000009820	-	99	56.364	ENSJJAG00000009021	Safb	54	51.763	Jaculus_jaculus
ENSSPUG00000009820	-	94	47.396	ENSKMAG00000022308	safb	51	41.910	Kryptolebias_marmoratus
ENSSPUG00000009820	-	99	46.739	ENSLBEG00000006015	safb	51	43.048	Labrus_bergylta
ENSSPUG00000009820	-	98	55.800	ENSLACG00000018090	SAFB	83	52.840	Latimeria_chalumnae
ENSSPUG00000009820	-	98	49.938	ENSLOCG00000003613	safb	61	44.633	Lepisosteus_oculatus
ENSSPUG00000009820	-	99	62.162	ENSMMUG00000017970	SAFB	82	59.102	Macaca_mulatta
ENSSPUG00000009820	-	99	59.975	ENSMNEG00000035637	SAFB	50	55.285	Macaca_nemestrina
ENSSPUG00000009820	-	94	48.966	ENSMZEG00005009120	safb	52	44.294	Maylandia_zebra
ENSSPUG00000009820	-	90	71.042	ENSMGAG00000001051	-	84	69.959	Meleagris_gallopavo
ENSSPUG00000009820	-	98	69.231	ENSMGAG00000001101	-	84	67.718	Meleagris_gallopavo
ENSSPUG00000009820	-	86	55.158	ENSMICG00000046795	-	62	52.816	Microcebus_murinus
ENSSPUG00000009820	-	64	51.481	ENSMOCG00000014040	Safb	54	49.534	Microtus_ochrogaster
ENSSPUG00000009820	-	99	62.899	ENSMODG00000001236	SAFB	53	62.355	Monodelphis_domestica
ENSSPUG00000009820	-	64	50.462	MGP_CAROLIEiJ_G0021780	Safb	54	48.885	Mus_caroli
ENSSPUG00000009820	-	64	50.462	ENSMUSG00000071054	Safb	54	49.071	Mus_musculus
ENSSPUG00000009820	-	63	50.000	MGP_PahariEiJ_G0020769	Safb	54	48.794	Mus_pahari
ENSSPUG00000009820	-	99	54.303	ENSNGAG00000019882	Safb	54	47.681	Nannospalax_galili
ENSSPUG00000009820	-	98	62.861	ENSNLEG00000013551	SAFB	79	59.222	Nomascus_leucogenys
ENSSPUG00000009820	-	64	54.247	ENSOPRG00000011561	-	59	52.031	Ochotona_princeps
ENSSPUG00000009820	-	64	56.425	ENSODEG00000014838	SAFB	53	54.953	Octodon_degus
ENSSPUG00000009820	-	94	48.796	ENSONIG00000002318	safb	51	43.315	Oreochromis_niloticus
ENSSPUG00000009820	-	99	54.104	ENSOCUG00000014628	SAFB	58	53.861	Oryctolagus_cuniculus
ENSSPUG00000009820	-	94	45.372	ENSORLG00000016989	safb	51	40.546	Oryzias_latipes
ENSSPUG00000009820	-	99	44.334	ENSORLG00015010733	safb	51	40.546	Oryzias_latipes_hsok
ENSSPUG00000009820	-	94	44.961	ENSOMEG00000009066	safb	52	40.000	Oryzias_melastigma
ENSSPUG00000009820	-	85	56.686	ENSOARG00000007856	-	69	56.008	Ovis_aries
ENSSPUG00000009820	-	99	62.285	ENSPPAG00000035129	SAFB	52	57.171	Pan_paniscus
ENSSPUG00000009820	-	99	61.146	ENSPPRG00000017197	SAFB	53	55.985	Panthera_pardus
ENSSPUG00000009820	-	99	62.285	ENSPTRG00000010335	SAFB	52	57.171	Pan_troglodytes
ENSSPUG00000009820	-	97	48.020	ENSPKIG00000009902	safb	57	45.489	Paramormyrops_kingsleyae
ENSSPUG00000009820	-	98	70.588	ENSPSIG00000009367	-	52	70.428	Pelodiscus_sinensis
ENSSPUG00000009820	-	98	80.051	ENSPSIG00000011679	-	87	79.419	Pelodiscus_sinensis
ENSSPUG00000009820	-	64	51.673	ENSPEMG00000020428	Safb	54	49.907	Peromyscus_maniculatus_bairdii
ENSSPUG00000009820	-	99	61.671	ENSPPYG00000009428	SAFB	53	57.171	Pongo_abelii
ENSSPUG00000009820	-	97	57.775	ENSPCAG00000006475	SAFB	72	67.935	Procavia_capensis
ENSSPUG00000009820	-	94	58.870	ENSPVAG00000004913	SAFB	68	57.263	Pteropus_vampyrus
ENSSPUG00000009820	-	69	57.848	ENSPNAG00000021838	safb	51	45.597	Pygocentrus_nattereri
ENSSPUG00000009820	-	64	50.923	ENSRNOG00000050543	Safb	60	48.980	Rattus_norvegicus
ENSSPUG00000009820	-	99	62.039	ENSSBOG00000026291	SAFB	82	59.227	Saimiri_boliviensis_boliviensis
ENSSPUG00000009820	-	99	48.585	ENSSFOG00015008156	safb	53	45.977	Scleropages_formosus
ENSSPUG00000009820	-	98	47.066	ENSSMAG00000009316	safb	51	42.938	Scophthalmus_maximus
ENSSPUG00000009820	-	85	48.498	ENSSLDG00000001670	safb	51	41.667	Seriola_lalandi_dorsalis
ENSSPUG00000009820	-	64	55.747	ENSSARG00000010475	SAFB	56	54.545	Sorex_araneus
ENSSPUG00000009820	-	81	50.453	ENSSPAG00000015682	safb	56	41.954	Stegastes_partitus
ENSSPUG00000009820	-	99	62.116	ENSSSCG00000013522	SAFB	62	57.558	Sus_scrofa
ENSSPUG00000009820	-	96	76.494	ENSTGUG00000000489	-	85	76.073	Taeniopygia_guttata
ENSSPUG00000009820	-	98	67.003	ENSTGUG00000000502	-	85	65.239	Taeniopygia_guttata
ENSSPUG00000009820	-	98	61.635	ENSTTRG00000013588	SAFB	52	56.582	Tursiops_truncatus
ENSSPUG00000009820	-	87	57.447	ENSUMAG00000009734	SAFB	69	65.421	Ursus_maritimus