EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000009848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 20750 bases
Position: chrQEPC01008408.1:366509-387258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000012792	MMR_HSR1	PF01926.23	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013645	-	1531	-	ENSSPUP00000012792	288 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000009848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000009848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000009848	-	74	45.070	ENSSPUG00000009769	-	92	45.070
ENSSPUG00000009848	-	75	68.664	ENSSPUG00000009760	-	99	68.664
ENSSPUG00000009848	-	93	62.545	ENSSPUG00000010063	-	99	60.616
ENSSPUG00000009848	-	71	48.293	ENSSPUG00000009907	-	92	48.293
ENSSPUG00000009848	-	73	45.755	ENSSPUG00000010052	-	92	45.755
ENSSPUG00000009848	-	83	52.869	ENSSPUG00000012235	-	68	52.869
ENSSPUG00000009848	-	70	42.079	ENSSPUG00000009924	-	92	42.079
ENSSPUG00000009848	-	72	53.623	ENSSPUG00000010046	-	71	53.623
ENSSPUG00000009848	-	83	52.869	ENSSPUG00000009775	-	59	52.869
ENSSPUG00000009848	-	67	54.404	ENSSPUG00000009917	-	73	72.727
ENSSPUG00000009848	-	70	45.274	ENSSPUG00000009896	-	92	45.274
ENSSPUG00000009848	-	76	55.046	ENSSPUG00000009782	-	78	59.116
ENSSPUG00000009848	-	80	50.870	ENSSPUG00000009816	-	69	50.870
ENSSPUG00000009848	-	80	71.739	ENSSPUG00000003272	-	63	67.717
ENSSPUG00000009848	-	66	63.351	ENSSPUG00000014119	-	88	63.351
ENSSPUG00000009848	-	88	66.279	ENSSPUG00000010036	-	89	66.279
ENSSPUG00000009848	-	79	67.982	ENSSPUG00000009833	-	88	67.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000009848	-	79	54.464	ENSG00000281887	GIMAP1-GIMAP5	71	54.464	Homo_sapiens
ENSSPUG00000009848	-	78	45.228	ENSG00000196329	GIMAP5	82	44.622	Homo_sapiens
ENSSPUG00000009848	-	71	51.961	ENSAPLG00000001066	-	83	51.961	Anas_platyrhynchos
ENSSPUG00000009848	-	66	53.439	ENSACAG00000017193	-	84	53.439	Anolis_carolinensis
ENSSPUG00000009848	-	82	46.429	ENSACAG00000016727	-	88	46.429	Anolis_carolinensis
ENSSPUG00000009848	-	92	50.000	ENSACAG00000028535	-	97	50.000	Anolis_carolinensis
ENSSPUG00000009848	-	66	58.730	ENSACAG00000016862	-	92	58.730	Anolis_carolinensis
ENSSPUG00000009848	-	80	45.714	ENSBTAG00000004894	-	77	53.614	Bos_taurus
ENSSPUG00000009848	-	82	44.444	ENSBTAG00000039588	-	85	44.444	Bos_taurus
ENSSPUG00000009848	-	79	48.899	ENSBTAG00000000715	-	69	48.899	Bos_taurus
ENSSPUG00000009848	-	88	41.418	ENSCJAG00000020126	-	86	41.418	Callithrix_jacchus
ENSSPUG00000009848	-	88	41.606	ENSCAFG00000024817	-	80	41.606	Canis_familiaris
ENSSPUG00000009848	-	89	42.205	ENSCAFG00020006487	-	89	42.205	Canis_lupus_dingo
ENSSPUG00000009848	-	81	49.138	ENSCHIG00000013093	-	77	49.138	Capra_hircus
ENSSPUG00000009848	-	73	51.675	ENSCHIG00000000431	-	68	51.675	Capra_hircus
ENSSPUG00000009848	-	80	47.755	ENSCHIG00000000607	-	82	47.755	Capra_hircus
ENSSPUG00000009848	-	83	45.490	ENSCHIG00000020434	-	80	53.614	Capra_hircus
ENSSPUG00000009848	-	70	54.455	ENSTSYG00000010016	-	91	45.387	Carlito_syrichta
ENSSPUG00000009848	-	90	42.238	ENSCAPG00000007631	-	89	42.238	Cavia_aperea
ENSSPUG00000009848	-	98	41.060	ENSCPOG00000003376	-	96	41.060	Cavia_porcellus
ENSSPUG00000009848	-	88	42.910	ENSCCAG00000009203	-	86	42.910	Cebus_capucinus
ENSSPUG00000009848	-	86	43.911	ENSCLAG00000001322	-	84	43.911	Chinchilla_lanigera
ENSSPUG00000009848	-	81	45.238	ENSCLAG00000001246	-	82	45.238	Chinchilla_lanigera
ENSSPUG00000009848	-	78	45.228	ENSCSAG00000006865	-	75	45.228	Chlorocebus_sabaeus
ENSSPUG00000009848	-	79	56.332	ENSCPBG00000005548	-	79	56.332	Chrysemys_picta_bellii
ENSSPUG00000009848	-	71	50.980	ENSCANG00000029802	-	66	50.980	Colobus_angolensis_palliatus
ENSSPUG00000009848	-	79	47.137	ENSCGRG00001024196	-	73	47.137	Cricetulus_griseus_chok1gshd
ENSSPUG00000009848	-	83	45.188	ENSCGRG00001024272	-	77	45.188	Cricetulus_griseus_chok1gshd
ENSSPUG00000009848	-	83	45.188	ENSCGRG00000014686	-	77	45.188	Cricetulus_griseus_crigri
ENSSPUG00000009848	-	79	47.577	ENSCGRG00000015177	-	73	47.577	Cricetulus_griseus_crigri
ENSSPUG00000009848	-	73	51.174	ENSECAG00000029716	-	68	51.174	Equus_caballus
ENSSPUG00000009848	-	78	50.222	ENSECAG00000007668	-	72	50.222	Equus_caballus
ENSSPUG00000009848	-	73	50.704	ENSECAG00000007663	-	68	50.704	Equus_caballus
ENSSPUG00000009848	-	71	50.980	ENSEEUG00000006852	-	72	51.485	Erinaceus_europaeus
ENSSPUG00000009848	-	91	42.606	ENSFCAG00000042622	-	91	42.606	Felis_catus
ENSSPUG00000009848	-	69	54.412	ENSGAGG00000015825	-	72	54.412	Gopherus_agassizii
ENSSPUG00000009848	-	64	62.842	ENSGAGG00000015829	-	86	62.842	Gopherus_agassizii
ENSSPUG00000009848	-	79	54.464	ENSGGOG00000014216	-	88	43.911	Gorilla_gorilla
ENSSPUG00000009848	-	90	39.649	ENSSTOG00000021076	-	91	39.649	Ictidomys_tridecemlineatus
ENSSPUG00000009848	-	73	33.728	ENSKMAG00000007013	-	76	32.143	Kryptolebias_marmoratus
ENSSPUG00000009848	-	70	51.980	ENSMFAG00000044951	-	63	51.980	Macaca_fascicularis
ENSSPUG00000009848	-	78	53.636	ENSMMUG00000001270	-	84	45.455	Macaca_mulatta
ENSSPUG00000009848	-	78	45.643	ENSMNEG00000028821	-	79	45.643	Macaca_nemestrina
ENSSPUG00000009848	-	78	45.228	ENSMLEG00000029622	-	79	45.228	Mandrillus_leucophaeus
ENSSPUG00000009848	-	79	44.490	ENSMICG00000027282	-	79	44.490	Microcebus_murinus
ENSSPUG00000009848	-	82	43.874	ENSMICG00000035983	-	81	43.874	Microcebus_murinus
ENSSPUG00000009848	-	81	45.161	ENSMOCG00000018608	-	82	45.161	Microtus_ochrogaster
ENSSPUG00000009848	-	78	49.115	ENSMOCG00000002213	-	97	49.115	Microtus_ochrogaster
ENSSPUG00000009848	-	69	53.535	ENSMODG00000003669	-	62	53.535	Monodelphis_domestica
ENSSPUG00000009848	-	69	51.515	MGP_CAROLIEiJ_G0028355	Gimap3	65	51.515	Mus_caroli
ENSSPUG00000009848	-	78	46.250	MGP_CAROLIEiJ_G0028354	Gimap5	88	43.911	Mus_caroli
ENSSPUG00000009848	-	78	46.250	ENSMUSG00000043505	Gimap5	88	43.750	Mus_musculus
ENSSPUG00000009848	-	78	46.250	ENSMUSG00000039264	Gimap3	80	46.250	Mus_musculus
ENSSPUG00000009848	-	76	48.624	MGP_PahariEiJ_G0022105	Gimap3	71	48.624	Mus_pahari
ENSSPUG00000009848	-	78	45.833	MGP_PahariEiJ_G0022104	Gimap5	87	43.866	Mus_pahari
ENSSPUG00000009848	-	73	50.698	ENSMLUG00000007287	-	69	50.698	Myotis_lucifugus
ENSSPUG00000009848	-	69	47.236	ENSMLUG00000026545	-	66	46.766	Myotis_lucifugus
ENSSPUG00000009848	-	70	49.275	ENSMLUG00000025954	-	97	49.275	Myotis_lucifugus
ENSSPUG00000009848	-	80	45.492	ENSMLUG00000023466	-	85	45.492	Myotis_lucifugus
ENSSPUG00000009848	-	70	45.588	ENSMLUG00000022809	-	79	45.588	Myotis_lucifugus
ENSSPUG00000009848	-	80	43.983	ENSMLUG00000028966	-	78	43.983	Myotis_lucifugus
ENSSPUG00000009848	-	92	44.444	ENSNGAG00000020526	-	92	44.444	Nannospalax_galili
ENSSPUG00000009848	-	99	43.750	ENSNGAG00000022013	-	95	43.750	Nannospalax_galili
ENSSPUG00000009848	-	72	49.528	ENSNLEG00000003844	-	69	49.528	Nomascus_leucogenys
ENSSPUG00000009848	-	68	57.868	ENSMEUG00000000849	-	72	57.868	Notamacropus_eugenii
ENSSPUG00000009848	-	70	56.436	ENSMEUG00000016596	-	74	56.436	Notamacropus_eugenii
ENSSPUG00000009848	-	68	51.269	ENSODEG00000011306	-	90	42.349	Octodon_degus
ENSSPUG00000009848	-	72	48.792	ENSOCUG00000005976	-	66	48.792	Oryctolagus_cuniculus
ENSSPUG00000009848	-	72	49.275	ENSOCUG00000025892	-	89	49.275	Oryctolagus_cuniculus
ENSSPUG00000009848	-	83	44.094	ENSOGAG00000009145	-	83	44.094	Otolemur_garnettii
ENSSPUG00000009848	-	80	48.571	ENSOARG00000001589	-	71	48.571	Ovis_aries
ENSSPUG00000009848	-	83	45.490	ENSOARG00000001288	-	82	45.490	Ovis_aries
ENSSPUG00000009848	-	87	46.241	ENSOARG00000001645	-	85	46.241	Ovis_aries
ENSSPUG00000009848	-	68	54.696	ENSOARG00000001183	-	89	54.696	Ovis_aries
ENSSPUG00000009848	-	79	54.464	ENSPPAG00000042001	-	88	43.911	Pan_paniscus
ENSSPUG00000009848	-	73	50.235	ENSPPRG00000017393	-	69	50.235	Panthera_pardus
ENSSPUG00000009848	-	73	50.235	ENSPTIG00000012405	-	69	50.235	Panthera_tigris_altaica
ENSSPUG00000009848	-	79	53.571	ENSPTRG00000028356	-	73	53.571	Pan_troglodytes
ENSSPUG00000009848	-	79	53.571	ENSPTRG00000034465	GIMAP1	88	43.542	Pan_troglodytes
ENSSPUG00000009848	-	78	45.228	ENSPANG00000030896	-	79	45.228	Papio_anubis
ENSSPUG00000009848	-	69	54.271	ENSPSIG00000000573	-	83	54.271	Pelodiscus_sinensis
ENSSPUG00000009848	-	70	66.502	ENSPSIG00000013467	-	89	66.502	Pelodiscus_sinensis
ENSSPUG00000009848	-	69	67.662	ENSPSIG00000000508	-	79	67.662	Pelodiscus_sinensis
ENSSPUG00000009848	-	72	50.242	ENSPSIG00000016016	-	64	50.242	Pelodiscus_sinensis
ENSSPUG00000009848	-	69	51.659	ENSPSIG00000006796	-	98	51.741	Pelodiscus_sinensis
ENSSPUG00000009848	-	87	43.019	ENSPEMG00000014554	-	90	42.751	Peromyscus_maniculatus_bairdii
ENSSPUG00000009848	-	81	44.355	ENSPEMG00000019236	-	81	44.355	Peromyscus_maniculatus_bairdii
ENSSPUG00000009848	-	68	51.795	ENSPCIG00000001766	-	69	51.795	Phascolarctos_cinereus
ENSSPUG00000009848	-	70	55.941	ENSPCIG00000008658	-	63	55.941	Phascolarctos_cinereus
ENSSPUG00000009848	-	72	50.472	ENSPPYG00000018173	-	64	50.472	Pongo_abelii
ENSSPUG00000009848	-	79	45.714	ENSPCOG00000016811	-	79	45.714	Propithecus_coquereli
ENSSPUG00000009848	-	87	44.528	ENSRNOG00000008416	Gimap5	99	40.909	Rattus_norvegicus
ENSSPUG00000009848	-	71	51.471	ENSRBIG00000035290	-	66	51.471	Rhinopithecus_bieti
ENSSPUG00000009848	-	71	51.471	ENSRROG00000028817	-	63	51.471	Rhinopithecus_roxellana
ENSSPUG00000009848	-	70	50.495	ENSSBOG00000032164	-	66	50.495	Saimiri_boliviensis_boliviensis
ENSSPUG00000009848	-	70	53.731	ENSSHAG00000000843	-	85	53.731	Sarcophilus_harrisii
ENSSPUG00000009848	-	79	46.725	ENSSARG00000004634	-	77	46.725	Sorex_araneus
ENSSPUG00000009848	-	77	49.550	ENSSSCG00000039407	-	70	49.550	Sus_scrofa
ENSSPUG00000009848	-	88	43.116	ENSTBEG00000000035	-	92	43.116	Tupaia_belangeri
ENSSPUG00000009848	-	70	50.739	ENSTTRG00000011008	-	84	50.739	Tursiops_truncatus
ENSSPUG00000009848	-	78	46.250	ENSTTRG00000003204	-	82	46.250	Tursiops_truncatus
ENSSPUG00000009848	-	81	47.917	ENSUMAG00000018133	-	80	47.917	Ursus_maritimus
ENSSPUG00000009848	-	74	48.357	ENSVPAG00000011693	-	73	46.352	Vicugna_pacos