EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 129424 bases
Position: chrQEPC01000155.1:3007387-3136810
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	1	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	2	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	3	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	4	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	5	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	6	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	7	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	8	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	9	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	10	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	11	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	12	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	13	14
ENSSPUP00000013001	zf-C2H2	PF00096.26	3.6e-91	14	14
ENSSPUP00000013001	zf-met	PF12874.7	2.7e-24	1	3
ENSSPUP00000013001	zf-met	PF12874.7	2.7e-24	2	3
ENSSPUP00000013001	zf-met	PF12874.7	2.7e-24	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013867	-	1491	-	ENSSPUP00000013001	496 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010016	-	84	38.060	ENSSPUG00000005427	-	54	41.791
ENSSPUG00000010016	-	88	53.398	ENSSPUG00000016039	GFI1B	50	53.398
ENSSPUG00000010016	-	94	32.192	ENSSPUG00000015298	PATZ1	51	31.602
ENSSPUG00000010016	-	82	40.000	ENSSPUG00000018637	SCRT2	53	40.000
ENSSPUG00000010016	-	93	44.898	ENSSPUG00000007686	RREB1	53	35.366
ENSSPUG00000010016	-	96	73.455	ENSSPUG00000018867	-	89	73.455
ENSSPUG00000010016	-	84	36.567	ENSSPUG00000018057	SNAI1	51	39.552
ENSSPUG00000010016	-	79	36.538	ENSSPUG00000001720	OVOL2	88	36.538
ENSSPUG00000010016	-	99	72.451	ENSSPUG00000000136	-	99	72.727
ENSSPUG00000010016	-	84	53.271	ENSSPUG00000007092	-	51	52.548
ENSSPUG00000010016	-	93	62.454	ENSSPUG00000000229	-	93	58.983
ENSSPUG00000010016	-	92	30.521	ENSSPUG00000013355	PRDM15	50	30.515
ENSSPUG00000010016	-	93	73.391	ENSSPUG00000004366	-	53	73.391
ENSSPUG00000010016	-	95	48.052	ENSSPUG00000011420	E4F1	69	40.645
ENSSPUG00000010016	-	95	57.576	ENSSPUG00000007147	-	92	57.576
ENSSPUG00000010016	-	96	38.346	ENSSPUG00000000709	ZNF236	80	37.333
ENSSPUG00000010016	-	90	47.183	ENSSPUG00000009941	PRDM5	85	35.889
ENSSPUG00000010016	-	88	33.632	ENSSPUG00000008417	ZNF770	96	33.632
ENSSPUG00000010016	-	92	55.263	ENSSPUG00000007064	-	99	51.713
ENSSPUG00000010016	-	88	35.762	ENSSPUG00000005307	GTF3A	72	35.762
ENSSPUG00000010016	-	88	42.484	ENSSPUG00000015952	-	53	42.484
ENSSPUG00000010016	-	96	66.133	ENSSPUG00000009764	-	61	66.133
ENSSPUG00000010016	-	99	67.974	ENSSPUG00000009898	-	98	67.183
ENSSPUG00000010016	-	88	34.615	ENSSPUG00000010618	MAZ	66	31.801
ENSSPUG00000010016	-	97	68.442	ENSSPUG00000010059	-	87	68.072
ENSSPUG00000010016	-	90	39.298	ENSSPUG00000011853	ZBTB48	53	39.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010016	-	94	46.570	ENSACAG00000024898	-	98	44.482	Anolis_carolinensis
ENSSPUG00000010016	-	93	54.438	ENSACAG00000008664	-	66	55.243	Anolis_carolinensis
ENSSPUG00000010016	-	92	48.855	ENSACAG00000024956	-	77	48.855	Anolis_carolinensis
ENSSPUG00000010016	-	92	53.667	ENSAMXG00000038325	-	93	53.488	Astyanax_mexicanus
ENSSPUG00000010016	-	95	54.930	ENSAMXG00000034847	-	90	54.930	Astyanax_mexicanus
ENSSPUG00000010016	-	93	52.186	ENSAMXG00000042746	-	89	52.747	Astyanax_mexicanus
ENSSPUG00000010016	-	90	59.732	ENSAMXG00000038636	-	98	56.563	Astyanax_mexicanus
ENSSPUG00000010016	-	94	53.571	ENSAMXG00000010805	-	95	53.571	Astyanax_mexicanus
ENSSPUG00000010016	-	96	56.680	ENSAMXG00000034344	-	83	54.202	Astyanax_mexicanus
ENSSPUG00000010016	-	91	53.982	ENSAMXG00000042784	-	94	53.982	Astyanax_mexicanus
ENSSPUG00000010016	-	93	54.396	ENSAMXG00000038536	-	89	54.396	Astyanax_mexicanus
ENSSPUG00000010016	-	96	55.899	ENSAMXG00000025452	-	99	55.899	Astyanax_mexicanus
ENSSPUG00000010016	-	90	55.024	ENSAMXG00000032841	-	77	55.024	Astyanax_mexicanus
ENSSPUG00000010016	-	94	59.191	ENSAMXG00000036233	-	84	59.191	Astyanax_mexicanus
ENSSPUG00000010016	-	93	42.654	ENSAMXG00000035246	-	68	42.654	Astyanax_mexicanus
ENSSPUG00000010016	-	92	43.831	ENSBTAG00000038322	-	77	43.831	Bos_taurus
ENSSPUG00000010016	-	98	42.284	ENSCPBG00000008580	-	81	45.324	Chrysemys_picta_bellii
ENSSPUG00000010016	-	91	42.282	ENSCPBG00000013652	-	72	42.282	Chrysemys_picta_bellii
ENSSPUG00000010016	-	93	50.000	ENSCPBG00000001526	-	84	50.000	Chrysemys_picta_bellii
ENSSPUG00000010016	-	93	60.000	ENSCPBG00000026433	-	56	60.000	Chrysemys_picta_bellii
ENSSPUG00000010016	-	91	47.895	ENSCSAVG00000010960	-	100	46.853	Ciona_savignyi
ENSSPUG00000010016	-	96	44.805	ENSDNOG00000047495	-	78	44.262	Dasypus_novemcinctus
ENSSPUG00000010016	-	88	44.676	ENSEBUG00000011694	-	95	44.676	Eptatretus_burgeri
ENSSPUG00000010016	-	91	43.765	ENSEBUG00000005264	-	76	42.553	Eptatretus_burgeri
ENSSPUG00000010016	-	91	39.899	ENSEBUG00000014717	-	71	39.899	Eptatretus_burgeri
ENSSPUG00000010016	-	91	45.748	ENSEBUG00000011435	-	83	44.980	Eptatretus_burgeri
ENSSPUG00000010016	-	94	46.028	ENSEBUG00000012919	-	75	49.254	Eptatretus_burgeri
ENSSPUG00000010016	-	91	43.829	ENSEBUG00000002075	-	85	42.752	Eptatretus_burgeri
ENSSPUG00000010016	-	92	47.186	ENSEBUG00000015837	-	77	47.186	Eptatretus_burgeri
ENSSPUG00000010016	-	90	44.898	ENSEBUG00000008306	-	79	44.898	Eptatretus_burgeri
ENSSPUG00000010016	-	91	37.396	ENSEBUG00000013875	-	86	36.830	Eptatretus_burgeri
ENSSPUG00000010016	-	92	42.951	ENSEASG00005004469	-	70	42.951	Equus_asinus_asinus
ENSSPUG00000010016	-	93	46.388	ENSFHEG00000004382	-	51	45.622	Fundulus_heteroclitus
ENSSPUG00000010016	-	92	42.489	ENSGMOG00000018506	-	100	37.084	Gadus_morhua
ENSSPUG00000010016	-	92	53.156	ENSGALG00000046336	-	99	53.156	Gallus_gallus
ENSSPUG00000010016	-	97	55.702	ENSGALG00000053507	-	85	54.582	Gallus_gallus
ENSSPUG00000010016	-	88	44.839	ENSGALG00000049609	-	56	44.839	Gallus_gallus
ENSSPUG00000010016	-	92	50.827	ENSGALG00000054325	-	97	50.827	Gallus_gallus
ENSSPUG00000010016	-	94	53.495	ENSGALG00000044069	-	56	53.495	Gallus_gallus
ENSSPUG00000010016	-	90	53.035	ENSGALG00000055127	-	63	50.923	Gallus_gallus
ENSSPUG00000010016	-	86	44.545	ENSGACG00000006283	-	94	42.424	Gasterosteus_aculeatus
ENSSPUG00000010016	-	93	54.724	ENSGAGG00000011399	-	86	54.724	Gopherus_agassizii
ENSSPUG00000010016	-	95	51.829	ENSGAGG00000011366	-	97	51.829	Gopherus_agassizii
ENSSPUG00000010016	-	97	55.254	ENSGAGG00000018885	-	71	56.643	Gopherus_agassizii
ENSSPUG00000010016	-	93	43.408	ENSHCOG00000018201	-	90	43.498	Hippocampus_comes
ENSSPUG00000010016	-	96	58.034	ENSIPUG00000015468	-	88	58.034	Ictalurus_punctatus
ENSSPUG00000010016	-	95	52.000	ENSIPUG00000021515	-	85	52.857	Ictalurus_punctatus
ENSSPUG00000010016	-	94	42.365	ENSIPUG00000012109	ZN12	51	42.365	Ictalurus_punctatus
ENSSPUG00000010016	-	94	40.887	ENSJJAG00000023633	Zfp672	91	46.018	Jaculus_jaculus
ENSSPUG00000010016	-	98	37.903	ENSLACG00000009005	-	100	38.028	Latimeria_chalumnae
ENSSPUG00000010016	-	97	52.488	ENSLACG00000022211	-	84	52.488	Latimeria_chalumnae
ENSSPUG00000010016	-	94	41.613	ENSLACG00000005264	-	98	39.940	Latimeria_chalumnae
ENSSPUG00000010016	-	87	42.759	ENSLOCG00000014210	-	50	42.759	Lepisosteus_oculatus
ENSSPUG00000010016	-	90	44.625	ENSLOCG00000017864	-	100	44.625	Lepisosteus_oculatus
ENSSPUG00000010016	-	97	55.977	ENSMGAG00000013362	-	100	55.977	Meleagris_gallopavo
ENSSPUG00000010016	-	94	42.105	ENSMAUG00000009945	Zfp672	88	42.152	Mesocricetus_auratus
ENSSPUG00000010016	-	92	42.038	ENSMMOG00000003923	-	87	42.038	Mola_mola
ENSSPUG00000010016	-	94	46.118	ENSMODG00000001880	-	80	46.118	Monodelphis_domestica
ENSSPUG00000010016	-	92	39.796	ENSMODG00000014052	-	100	39.796	Monodelphis_domestica
ENSSPUG00000010016	-	92	45.283	ENSMODG00000010532	-	86	45.283	Monodelphis_domestica
ENSSPUG00000010016	-	93	48.333	MGP_CAROLIEiJ_G0030502	-	67	45.575	Mus_caroli
ENSSPUG00000010016	-	94	42.105	MGP_CAROLIEiJ_G0016391	Zfp672	90	44.872	Mus_caroli
ENSSPUG00000010016	-	90	46.866	ENSMUSG00000030823	9130019O22Rik	68	44.330	Mus_musculus
ENSSPUG00000010016	-	94	41.627	ENSMUSG00000049755	Zfp672	90	44.872	Mus_musculus
ENSSPUG00000010016	-	94	41.627	MGP_SPRETEiJ_G0017233	Zfp672	90	44.872	Mus_spretus
ENSSPUG00000010016	-	84	46.667	MGP_SPRETEiJ_G0031613	-	84	45.575	Mus_spretus
ENSSPUG00000010016	-	98	48.855	ENSNGAG00000015777	Zim1	67	48.276	Nannospalax_galili
ENSSPUG00000010016	-	90	43.802	ENSNBRG00000007276	-	53	43.802	Neolamprologus_brichardi
ENSSPUG00000010016	-	90	44.023	ENSNBRG00000000708	-	97	44.023	Neolamprologus_brichardi
ENSSPUG00000010016	-	83	44.961	ENSORLG00020001922	-	85	43.750	Oryzias_latipes_hni
ENSSPUG00000010016	-	83	45.455	ENSOMEG00000001598	-	66	45.455	Oryzias_melastigma
ENSSPUG00000010016	-	92	41.623	ENSPSIG00000006586	-	99	41.623	Pelodiscus_sinensis
ENSSPUG00000010016	-	94	58.219	ENSPSIG00000006790	-	97	58.219	Pelodiscus_sinensis
ENSSPUG00000010016	-	93	51.961	ENSPSIG00000003152	-	78	48.230	Pelodiscus_sinensis
ENSSPUG00000010016	-	95	50.720	ENSPSIG00000005603	-	73	47.714	Pelodiscus_sinensis
ENSSPUG00000010016	-	93	49.091	ENSPSIG00000005672	-	64	51.961	Pelodiscus_sinensis
ENSSPUG00000010016	-	96	51.603	ENSPSIG00000012650	-	78	51.603	Pelodiscus_sinensis
ENSSPUG00000010016	-	93	54.521	ENSPSIG00000013021	-	74	54.521	Pelodiscus_sinensis
ENSSPUG00000010016	-	95	52.507	ENSPSIG00000010248	-	68	52.507	Pelodiscus_sinensis
ENSSPUG00000010016	-	93	49.421	ENSPSIG00000010328	-	75	48.173	Pelodiscus_sinensis
ENSSPUG00000010016	-	94	47.719	ENSPSIG00000004502	-	57	47.719	Pelodiscus_sinensis
ENSSPUG00000010016	-	94	57.721	ENSPSIG00000016380	-	74	54.422	Pelodiscus_sinensis
ENSSPUG00000010016	-	88	50.361	ENSPSIG00000015459	-	70	51.634	Pelodiscus_sinensis
ENSSPUG00000010016	-	92	46.759	ENSPSIG00000000672	-	87	45.833	Pelodiscus_sinensis
ENSSPUG00000010016	-	91	43.571	ENSPREG00000002642	-	92	43.571	Poecilia_reticulata
ENSSPUG00000010016	-	88	49.180	ENSPNYG00000015486	-	56	49.180	Pundamilia_nyererei
ENSSPUG00000010016	-	93	57.214	ENSPNAG00000000088	-	85	55.330	Pygocentrus_nattereri
ENSSPUG00000010016	-	89	53.881	ENSPNAG00000018395	-	61	53.881	Pygocentrus_nattereri
ENSSPUG00000010016	-	94	42.787	ENSRNOG00000002713	Zfp672	88	41.627	Rattus_norvegicus
ENSSPUG00000010016	-	93	43.627	ENSSHAG00000018106	-	78	41.686	Sarcophilus_harrisii
ENSSPUG00000010016	-	96	47.596	ENSSFOG00015019818	-	82	47.596	Scleropages_formosus
ENSSPUG00000010016	-	93	39.650	ENSSMAG00000004252	-	82	41.549	Scophthalmus_maximus
ENSSPUG00000010016	-	84	47.664	ENSSPAG00000021653	-	94	47.664	Stegastes_partitus
ENSSPUG00000010016	-	88	56.481	ENSTGUG00000018351	-	99	56.481	Taeniopygia_guttata
ENSSPUG00000010016	-	92	56.853	ENSTGUG00000015210	-	100	57.576	Taeniopygia_guttata
ENSSPUG00000010016	-	93	39.344	ENSTRUG00000022066	-	90	41.624	Takifugu_rubripes
ENSSPUG00000010016	-	95	43.797	ENSXETG00000031192	-	100	43.797	Xenopus_tropicalis
ENSSPUG00000010016	-	92	48.804	ENSXCOG00000006553	-	87	48.344	Xiphophorus_couchianus
ENSSPUG00000010016	-	91	41.870	ENSXMAG00000026680	-	86	42.857	Xiphophorus_maculatus