EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010059 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 115752 bases
Position: chrQEPC01000155.1:3178836-3294587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	1	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	2	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	3	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	4	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	5	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	6	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	7	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	8	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	9	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	10	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	11	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	12	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	13	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	14	15
ENSSPUP00000013070	zf-C2H2	PF00096.26	6.8e-106	15	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	1	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	2	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	3	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	4	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	5	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	6	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	7	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	8	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	9	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	10	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	11	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	12	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	13	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	14	15
ENSSPUP00000013075	zf-C2H2	PF00096.26	2.2e-105	15	15
ENSSPUP00000013070	zf-met	PF12874.7	5.3e-24	1	2
ENSSPUP00000013070	zf-met	PF12874.7	5.3e-24	2	2
ENSSPUP00000013075	zf-met	PF12874.7	1.7e-23	1	2
ENSSPUP00000013075	zf-met	PF12874.7	1.7e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000013941	-	1785	-	ENSSPUP00000013070	594 (aa)	-	-
ENSSPUT00000013946	-	1896	-	ENSSPUP00000013075	631 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010059	-	76	38.843	ENSSPUG00000006896	ZNF652	51	38.843
ENSSPUG00000010059	-	95	62.222	ENSSPUG00000009898	-	99	63.729
ENSSPUG00000010059	-	84	50.000	ENSSPUG00000014346	MYNN	54	50.000
ENSSPUG00000010059	-	93	63.081	ENSSPUG00000009764	-	74	63.081
ENSSPUG00000010059	-	82	38.298	ENSSPUG00000000709	ZNF236	69	42.857
ENSSPUG00000010059	-	76	40.909	ENSSPUG00000018637	SCRT2	50	40.909
ENSSPUG00000010059	-	81	39.597	ENSSPUG00000010618	MAZ	67	36.000
ENSSPUG00000010059	-	89	70.330	ENSSPUG00000018867	-	92	70.330
ENSSPUG00000010059	-	94	51.383	ENSSPUG00000007089	-	70	51.383
ENSSPUG00000010059	-	80	53.398	ENSSPUG00000016039	GFI1B	50	53.398
ENSSPUG00000010059	-	79	41.481	ENSSPUG00000005427	-	54	41.481
ENSSPUG00000010059	-	84	59.580	ENSSPUG00000007147	-	93	59.580
ENSSPUG00000010059	-	91	61.481	ENSSPUG00000000229	-	100	61.172
ENSSPUG00000010059	-	72	35.857	ENSSPUG00000005307	GTF3A	72	35.857
ENSSPUG00000010059	-	80	47.442	ENSSPUG00000007609	ZBTB49	59	47.442
ENSSPUG00000010059	-	79	44.000	ENSSPUG00000015952	-	74	44.375
ENSSPUG00000010059	-	83	51.020	ENSSPUG00000007686	RREB1	51	51.020
ENSSPUG00000010059	-	92	54.321	ENSSPUG00000007092	-	71	54.321
ENSSPUG00000010059	-	76	39.259	ENSSPUG00000018057	SNAI1	53	39.259
ENSSPUG00000010059	-	87	62.756	ENSSPUG00000000136	-	99	64.729
ENSSPUG00000010059	-	82	38.699	ENSSPUG00000011853	ZBTB48	53	38.699
ENSSPUG00000010059	-	77	51.111	ENSSPUG00000008417	ZNF770	76	51.111
ENSSPUG00000010059	-	72	40.909	ENSSPUG00000001720	OVOL2	67	40.909
ENSSPUG00000010059	-	78	46.479	ENSSPUG00000015298	PATZ1	54	46.479
ENSSPUG00000010059	-	87	68.072	ENSSPUG00000010016	-	97	68.442
ENSSPUG00000010059	-	93	66.942	ENSSPUG00000004366	-	71	66.942
ENSSPUG00000010059	-	77	50.980	ENSSPUG00000009941	PRDM5	71	50.980
ENSSPUG00000010059	-	78	45.455	ENSSPUG00000011420	E4F1	58	44.578
ENSSPUG00000010059	-	87	57.965	ENSSPUG00000007064	-	99	56.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010059	-	85	51.373	ENSACIG00000011153	-	70	55.385	Amphilophus_citrinellus
ENSSPUG00000010059	-	92	56.311	ENSACIG00000019791	-	96	55.556	Amphilophus_citrinellus
ENSSPUG00000010059	-	83	55.417	ENSANAG00000032414	-	84	55.417	Aotus_nancymaae
ENSSPUG00000010059	-	86	44.205	ENSACLG00000022499	-	88	44.205	Astatotilapia_calliptera
ENSSPUG00000010059	-	85	45.763	ENSACLG00000014167	-	60	45.763	Astatotilapia_calliptera
ENSSPUG00000010059	-	86	47.321	ENSACLG00000017329	-	82	47.321	Astatotilapia_calliptera
ENSSPUG00000010059	-	84	48.739	ENSACLG00000020474	-	89	48.739	Astatotilapia_calliptera
ENSSPUG00000010059	-	83	51.442	ENSACLG00000001507	-	79	51.442	Astatotilapia_calliptera
ENSSPUG00000010059	-	83	53.846	ENSAMXG00000039770	-	81	53.846	Astyanax_mexicanus
ENSSPUG00000010059	-	87	60.352	ENSAMXG00000031646	-	99	60.352	Astyanax_mexicanus
ENSSPUG00000010059	-	88	54.098	ENSAMXG00000031844	-	91	54.098	Astyanax_mexicanus
ENSSPUG00000010059	-	88	56.970	ENSAMXG00000036849	-	84	56.970	Astyanax_mexicanus
ENSSPUG00000010059	-	82	58.306	ENSAMXG00000010078	-	87	58.306	Astyanax_mexicanus
ENSSPUG00000010059	-	88	60.769	ENSAMXG00000031501	-	95	60.769	Astyanax_mexicanus
ENSSPUG00000010059	-	86	59.587	ENSAMXG00000039162	-	97	59.587	Astyanax_mexicanus
ENSSPUG00000010059	-	82	53.795	ENSAMXG00000038324	-	80	53.795	Astyanax_mexicanus
ENSSPUG00000010059	-	93	50.964	ENSCHIG00000015741	-	94	50.964	Capra_hircus
ENSSPUG00000010059	-	87	64.726	ENSCCAG00000035188	-	88	63.793	Cebus_capucinus
ENSSPUG00000010059	-	79	59.429	ENSCPBG00000001258	-	96	59.444	Chrysemys_picta_bellii
ENSSPUG00000010059	-	84	49.370	ENSDNOG00000048084	-	99	49.370	Dasypus_novemcinctus
ENSSPUG00000010059	-	76	47.700	ENSETEG00000002865	-	85	47.700	Echinops_telfairi
ENSSPUG00000010059	-	78	55.505	ENSEBUG00000008157	-	99	55.505	Eptatretus_burgeri
ENSSPUG00000010059	-	91	50.737	ENSEBUG00000011479	-	88	50.737	Eptatretus_burgeri
ENSSPUG00000010059	-	87	50.769	ENSEBUG00000012748	-	69	50.769	Eptatretus_burgeri
ENSSPUG00000010059	-	91	48.657	ENSEBUG00000011582	-	72	48.657	Eptatretus_burgeri
ENSSPUG00000010059	-	93	52.923	ENSECAG00000035557	-	88	51.775	Equus_caballus
ENSSPUG00000010059	-	77	52.703	ENSFHEG00000016184	-	74	52.703	Fundulus_heteroclitus
ENSSPUG00000010059	-	90	42.901	ENSGMOG00000004315	-	95	43.082	Gadus_morhua
ENSSPUG00000010059	-	85	39.031	ENSGACG00000019863	-	98	39.888	Gasterosteus_aculeatus
ENSSPUG00000010059	-	84	62.623	ENSGAGG00000013851	-	76	62.623	Gopherus_agassizii
ENSSPUG00000010059	-	89	64.336	ENSGAGG00000007230	-	82	64.336	Gopherus_agassizii
ENSSPUG00000010059	-	80	42.901	ENSHBUG00000013264	-	86	42.901	Haplochromis_burtoni
ENSSPUG00000010059	-	87	45.247	ENSHBUG00000006238	-	94	45.247	Haplochromis_burtoni
ENSSPUG00000010059	-	78	55.319	ENSHBUG00000021028	-	90	48.802	Haplochromis_burtoni
ENSSPUG00000010059	-	79	53.793	ENSHBUG00000017372	-	88	52.881	Haplochromis_burtoni
ENSSPUG00000010059	-	84	53.540	ENSHBUG00000000146	-	78	53.540	Haplochromis_burtoni
ENSSPUG00000010059	-	86	55.882	ENSHBUG00000019800	-	94	55.882	Haplochromis_burtoni
ENSSPUG00000010059	-	89	50.152	ENSHGLG00000018394	-	94	50.152	Heterocephalus_glaber_female
ENSSPUG00000010059	-	90	53.086	ENSIPUG00000022751	-	98	53.704	Ictalurus_punctatus
ENSSPUG00000010059	-	89	58.794	ENSIPUG00000021472	-	88	58.794	Ictalurus_punctatus
ENSSPUG00000010059	-	84	54.245	ENSIPUG00000003960	-	88	54.028	Ictalurus_punctatus
ENSSPUG00000010059	-	84	52.069	ENSIPUG00000021434	-	95	52.069	Ictalurus_punctatus
ENSSPUG00000010059	-	90	55.821	ENSIPUG00000009750	-	87	55.821	Ictalurus_punctatus
ENSSPUG00000010059	-	76	51.884	ENSIPUG00000021527	-	98	52.381	Ictalurus_punctatus
ENSSPUG00000010059	-	82	56.931	ENSIPUG00000021484	-	99	56.931	Ictalurus_punctatus
ENSSPUG00000010059	-	84	56.170	ENSIPUG00000001941	-	92	56.170	Ictalurus_punctatus
ENSSPUG00000010059	-	82	52.431	ENSIPUG00000013065	-	93	51.171	Ictalurus_punctatus
ENSSPUG00000010059	-	89	54.447	ENSIPUG00000021518	-	89	54.620	Ictalurus_punctatus
ENSSPUG00000010059	-	87	54.380	ENSIPUG00000015233	-	70	54.380	Ictalurus_punctatus
ENSSPUG00000010059	-	85	53.571	ENSIPUG00000006936	-	95	53.571	Ictalurus_punctatus
ENSSPUG00000010059	-	86	55.455	ENSIPUG00000011073	-	97	55.455	Ictalurus_punctatus
ENSSPUG00000010059	-	87	54.654	ENSSTOG00000034297	-	73	54.654	Ictidomys_tridecemlineatus
ENSSPUG00000010059	-	87	65.411	ENSMFAG00000046052	-	88	62.500	Macaca_fascicularis
ENSSPUG00000010059	-	87	65.753	ENSMNEG00000041636	-	88	62.813	Macaca_nemestrina
ENSSPUG00000010059	-	87	65.411	ENSMLEG00000032640	-	88	62.500	Mandrillus_leucophaeus
ENSSPUG00000010059	-	85	42.379	ENSMAMG00000009051	-	96	43.564	Mastacembelus_armatus
ENSSPUG00000010059	-	84	45.570	ENSMZEG00005027285	-	84	48.585	Maylandia_zebra
ENSSPUG00000010059	-	87	46.129	ENSMZEG00005020736	-	91	46.129	Maylandia_zebra
ENSSPUG00000010059	-	83	42.857	ENSMZEG00005019982	-	95	42.857	Maylandia_zebra
ENSSPUG00000010059	-	82	45.455	ENSMZEG00005012737	-	81	45.455	Maylandia_zebra
ENSSPUG00000010059	-	79	49.167	ENSMZEG00005021421	-	95	49.167	Maylandia_zebra
ENSSPUG00000010059	-	82	44.625	ENSMZEG00005027950	-	93	44.625	Maylandia_zebra
ENSSPUG00000010059	-	84	52.555	ENSMALG00000004413	-	95	52.555	Monopterus_albus
ENSSPUG00000010059	-	89	44.935	ENSNBRG00000016603	-	88	44.935	Neolamprologus_brichardi
ENSSPUG00000010059	-	90	44.180	ENSNBRG00000016582	-	85	44.180	Neolamprologus_brichardi
ENSSPUG00000010059	-	77	51.759	ENSNBRG00000013604	-	74	51.759	Neolamprologus_brichardi
ENSSPUG00000010059	-	92	52.857	ENSNBRG00000015873	-	99	52.857	Neolamprologus_brichardi
ENSSPUG00000010059	-	95	49.057	ENSNBRG00000015652	-	95	49.237	Neolamprologus_brichardi
ENSSPUG00000010059	-	79	46.626	ENSONIG00000000093	-	99	46.626	Oreochromis_niloticus
ENSSPUG00000010059	-	84	44.720	ENSONIG00000008953	-	94	44.720	Oreochromis_niloticus
ENSSPUG00000010059	-	85	51.101	ENSONIG00000021124	-	99	51.101	Oreochromis_niloticus
ENSSPUG00000010059	-	86	45.413	ENSONIG00000015166	-	100	45.413	Oreochromis_niloticus
ENSSPUG00000010059	-	83	52.910	ENSONIG00000020516	-	96	52.062	Oreochromis_niloticus
ENSSPUG00000010059	-	79	43.789	ENSONIG00000007931	-	85	44.292	Oreochromis_niloticus
ENSSPUG00000010059	-	84	44.330	ENSONIG00000000122	-	100	44.330	Oreochromis_niloticus
ENSSPUG00000010059	-	88	43.802	ENSONIG00000001834	-	100	43.802	Oreochromis_niloticus
ENSSPUG00000010059	-	88	53.368	ENSORLG00015012951	-	92	47.984	Oryzias_latipes_hsok
ENSSPUG00000010059	-	93	60.127	ENSOGAG00000025289	-	99	50.809	Otolemur_garnettii
ENSSPUG00000010059	-	87	65.411	ENSPANG00000030978	-	93	62.500	Papio_anubis
ENSSPUG00000010059	-	94	48.011	ENSPEMG00000016975	Zfp940	100	48.011	Peromyscus_maniculatus_bairdii
ENSSPUG00000010059	-	94	50.000	ENSPMEG00000004595	-	94	50.000	Poecilia_mexicana
ENSSPUG00000010059	-	97	63.580	ENSPPYG00000009906	-	99	63.580	Pongo_abelii
ENSSPUG00000010059	-	80	45.622	ENSPNYG00000024244	-	87	45.622	Pundamilia_nyererei
ENSSPUG00000010059	-	84	59.459	ENSPNAG00000019338	-	95	59.459	Pygocentrus_nattereri
ENSSPUG00000010059	-	82	59.821	ENSPNAG00000011625	-	93	59.821	Pygocentrus_nattereri
ENSSPUG00000010059	-	87	64.726	ENSSBOG00000029728	-	88	63.793	Saimiri_boliviensis_boliviensis