EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 8433 bases
Position: chrQEPC01005637.1:174358-182790
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013342	MMR_HSR1	PF01926.23	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000014223	-	1328	-	ENSSPUP00000013342	198 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010247	-	80	30.189	ENSSPUG00000011154	ARL3	74	30.189
ENSSPUG00000010247	-	76	34.177	ENSSPUG00000008413	ARL4A	79	34.177
ENSSPUG00000010247	-	64	31.496	ENSSPUG00000007555	ARL5C	77	31.496
ENSSPUG00000010247	-	96	30.366	ENSSPUG00000005249	-	96	30.366
ENSSPUG00000010247	-	94	30.526	ENSSPUG00000009412	ARL6	96	30.526
ENSSPUG00000010247	-	90	32.402	ENSSPUG00000006852	ARL11	86	32.402
ENSSPUG00000010247	-	86	30.000	ENSSPUG00000018502	ARFRP1	84	30.000
ENSSPUG00000010247	-	66	31.298	ENSSPUG00000004465	-	73	31.298
ENSSPUG00000010247	-	100	89.394	ENSSPUG00000009441	SAR1B	100	89.394
ENSSPUG00000010247	-	88	31.250	ENSSPUG00000018772	ARL14	85	31.250
ENSSPUG00000010247	-	64	35.714	ENSSPUG00000006649	ARL13B	51	35.714
ENSSPUG00000010247	-	90	31.844	ENSSPUG00000002363	-	88	31.844
ENSSPUG00000010247	-	56	30.909	ENSSPUG00000018364	-	98	30.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010247	-	100	84.343	ENSAPOG00000017891	-	100	84.343	Acanthochromis_polyacanthus
ENSSPUG00000010247	-	100	90.909	ENSAPOG00000007186	sar1b	100	90.909	Acanthochromis_polyacanthus
ENSSPUG00000010247	-	100	91.414	ENSACIG00000013634	sar1b	100	91.414	Amphilophus_citrinellus
ENSSPUG00000010247	-	100	82.828	ENSACIG00000024513	-	100	82.828	Amphilophus_citrinellus
ENSSPUG00000010247	-	100	90.404	ENSAOCG00000005888	sar1b	100	90.404	Amphiprion_ocellaris
ENSSPUG00000010247	-	100	84.343	ENSAOCG00000002627	-	100	84.343	Amphiprion_ocellaris
ENSSPUG00000010247	-	100	84.343	ENSAPEG00000019680	-	100	84.343	Amphiprion_percula
ENSSPUG00000010247	-	100	90.404	ENSAPEG00000022771	sar1b	100	90.404	Amphiprion_percula
ENSSPUG00000010247	-	100	87.879	ENSATEG00000012904	sar1b	100	87.879	Anabas_testudineus
ENSSPUG00000010247	-	100	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSSPUG00000010247	-	100	95.455	ENSACAG00000001470	-	100	95.455	Anolis_carolinensis
ENSSPUG00000010247	-	100	92.424	ENSACLG00000014649	sar1b	100	92.424	Astatotilapia_calliptera
ENSSPUG00000010247	-	100	83.838	ENSACLG00000005011	-	100	83.838	Astatotilapia_calliptera
ENSSPUG00000010247	-	59	91.453	ENSAMXG00000018108	sar1b	84	91.453	Astyanax_mexicanus
ENSSPUG00000010247	-	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSSPUG00000010247	-	100	82.828	ENSCSEG00000016976	-	100	82.828	Cynoglossus_semilaevis
ENSSPUG00000010247	-	100	83.838	ENSCSEG00000015238	sar1b	97	83.838	Cynoglossus_semilaevis
ENSSPUG00000010247	-	100	91.414	ENSCVAG00000022959	sar1b	100	91.414	Cyprinodon_variegatus
ENSSPUG00000010247	-	100	92.929	ENSDARG00000103403	sar1b	100	92.929	Danio_rerio
ENSSPUG00000010247	-	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSSPUG00000010247	-	98	87.629	ENSEBUG00000011723	sar1b	98	88.083	Eptatretus_burgeri
ENSSPUG00000010247	-	100	91.919	ENSELUG00000020912	sar1b	100	91.919	Esox_lucius
ENSSPUG00000010247	-	100	90.404	ENSFHEG00000019865	sar1b	100	90.404	Fundulus_heteroclitus
ENSSPUG00000010247	-	100	91.414	ENSGMOG00000008023	sar1b	100	91.414	Gadus_morhua
ENSSPUG00000010247	-	100	89.899	ENSGAFG00000007081	sar1b	100	89.899	Gambusia_affinis
ENSSPUG00000010247	-	100	88.889	ENSGACG00000001474	sar1b	100	88.889	Gasterosteus_aculeatus
ENSSPUG00000010247	-	100	83.838	ENSHBUG00000018397	-	100	83.838	Haplochromis_burtoni
ENSSPUG00000010247	-	100	92.424	ENSHBUG00000000915	sar1b	100	92.424	Haplochromis_burtoni
ENSSPUG00000010247	-	100	90.404	ENSHCOG00000010953	sar1b	100	90.404	Hippocampus_comes
ENSSPUG00000010247	-	100	91.414	ENSIPUG00000020925	sar1b	100	91.414	Ictalurus_punctatus
ENSSPUG00000010247	-	100	86.364	ENSIPUG00000010046	sar1b	100	86.364	Ictalurus_punctatus
ENSSPUG00000010247	-	100	90.404	ENSKMAG00000019693	sar1b	100	90.404	Kryptolebias_marmoratus
ENSSPUG00000010247	-	100	82.323	ENSKMAG00000014875	-	100	82.323	Kryptolebias_marmoratus
ENSSPUG00000010247	-	100	84.848	ENSLBEG00000016945	-	100	84.848	Labrus_bergylta
ENSSPUG00000010247	-	100	87.879	ENSLBEG00000027550	sar1b	100	87.879	Labrus_bergylta
ENSSPUG00000010247	-	100	86.364	ENSLACG00000010795	sar1b	100	86.364	Latimeria_chalumnae
ENSSPUG00000010247	-	100	75.377	ENSLACG00000017029	-	100	75.377	Latimeria_chalumnae
ENSSPUG00000010247	-	100	92.424	ENSLOCG00000010197	sar1b	100	92.424	Lepisosteus_oculatus
ENSSPUG00000010247	-	100	91.919	ENSLOCG00000005214	-	100	91.919	Lepisosteus_oculatus
ENSSPUG00000010247	-	100	89.394	ENSMAMG00000021732	sar1b	100	89.394	Mastacembelus_armatus
ENSSPUG00000010247	-	100	92.424	ENSMZEG00005008942	sar1b	100	92.424	Maylandia_zebra
ENSSPUG00000010247	-	100	83.838	ENSMZEG00005001012	-	100	83.838	Maylandia_zebra
ENSSPUG00000010247	-	90	97.765	ENSMGAG00000005387	-	91	97.765	Meleagris_gallopavo
ENSSPUG00000010247	-	100	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSSPUG00000010247	-	100	90.404	ENSMALG00000016635	sar1b	97	89.560	Monopterus_albus
ENSSPUG00000010247	-	100	83.838	ENSNBRG00000014004	-	100	83.838	Neolamprologus_brichardi
ENSSPUG00000010247	-	100	91.919	ENSNBRG00000008013	sar1b	100	91.919	Neolamprologus_brichardi
ENSSPUG00000010247	-	100	91.919	ENSONIG00000017278	sar1b	100	91.919	Oreochromis_niloticus
ENSSPUG00000010247	-	100	89.899	ENSORLG00000000932	sar1b	100	89.899	Oryzias_latipes
ENSSPUG00000010247	-	100	89.899	ENSORLG00020021985	sar1b	100	89.899	Oryzias_latipes_hni
ENSSPUG00000010247	-	100	89.899	ENSORLG00015007044	sar1b	100	89.899	Oryzias_latipes_hsok
ENSSPUG00000010247	-	100	90.404	ENSOMEG00000001052	sar1b	100	90.404	Oryzias_melastigma
ENSSPUG00000010247	-	100	90.909	ENSPKIG00000017353	-	100	90.909	Paramormyrops_kingsleyae
ENSSPUG00000010247	-	100	90.909	ENSPKIG00000010688	sar1b	100	90.909	Paramormyrops_kingsleyae
ENSSPUG00000010247	-	59	90.517	ENSPMGG00000001234	sar1b	91	90.517	Periophthalmus_magnuspinnatus
ENSSPUG00000010247	-	100	84.577	ENSPMAG00000003593	sar1b	100	84.577	Petromyzon_marinus
ENSSPUG00000010247	-	100	89.899	ENSPFOG00000005666	sar1b	100	89.899	Poecilia_formosa
ENSSPUG00000010247	-	59	85.470	ENSPLAG00000001016	-	75	85.470	Poecilia_latipinna
ENSSPUG00000010247	-	100	90.404	ENSPLAG00000012223	sar1b	100	90.404	Poecilia_latipinna
ENSSPUG00000010247	-	100	89.899	ENSPMEG00000016831	sar1b	100	89.899	Poecilia_mexicana
ENSSPUG00000010247	-	100	89.899	ENSPREG00000005312	sar1b	90	89.899	Poecilia_reticulata
ENSSPUG00000010247	-	60	84.746	ENSPREG00000002020	-	87	84.746	Poecilia_reticulata
ENSSPUG00000010247	-	100	83.838	ENSPNYG00000021357	-	100	83.838	Pundamilia_nyererei
ENSSPUG00000010247	-	100	92.424	ENSPNYG00000012440	sar1b	100	92.424	Pundamilia_nyererei
ENSSPUG00000010247	-	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSSPUG00000010247	-	100	86.364	ENSPNAG00000001123	-	100	86.364	Pygocentrus_nattereri
ENSSPUG00000010247	-	100	92.929	ENSSFOG00015020051	sar1b	100	92.929	Scleropages_formosus
ENSSPUG00000010247	-	100	93.434	ENSSFOG00015018128	-	100	93.434	Scleropages_formosus
ENSSPUG00000010247	-	100	83.838	ENSSMAG00000002165	-	100	83.838	Scophthalmus_maximus
ENSSPUG00000010247	-	100	89.899	ENSSMAG00000007106	sar1b	80	89.899	Scophthalmus_maximus
ENSSPUG00000010247	-	100	90.404	ENSSDUG00000020926	sar1b	100	90.404	Seriola_dumerili
ENSSPUG00000010247	-	100	83.838	ENSSDUG00000019629	-	100	83.838	Seriola_dumerili
ENSSPUG00000010247	-	100	90.404	ENSSLDG00000017052	sar1b	100	90.404	Seriola_lalandi_dorsalis
ENSSPUG00000010247	-	100	83.838	ENSSLDG00000024197	-	100	83.838	Seriola_lalandi_dorsalis
ENSSPUG00000010247	-	100	91.414	ENSSPAG00000017634	sar1b	100	91.414	Stegastes_partitus
ENSSPUG00000010247	-	100	83.838	ENSSPAG00000015626	-	100	83.838	Stegastes_partitus
ENSSPUG00000010247	-	100	85.354	ENSTRUG00000023908	sar1b	100	85.354	Takifugu_rubripes
ENSSPUG00000010247	-	100	87.374	ENSTNIG00000016097	sar1b	100	87.374	Tetraodon_nigroviridis
ENSSPUG00000010247	-	61	83.333	ENSXCOG00000006154	-	81	83.333	Xiphophorus_couchianus
ENSSPUG00000010247	-	90	91.011	ENSXCOG00000004160	sar1b	87	91.011	Xiphophorus_couchianus
ENSSPUG00000010247	-	100	89.899	ENSXMAG00000008294	sar1b	100	89.899	Xiphophorus_maculatus