EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010337 (Gene tree)
Gene ID: -
Gene Symbol: RAB42
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 20686 bases
Position: chrQEPC01004821.1:547028-567713
Accession: 28702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013449	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000014340	RAB42-201	645	-	ENSSPUP00000013449	214 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010337	RAB42	73	41.667	ENSSPUG00000017301	RAB6A	74	41.667
ENSSPUG00000010337	RAB42	96	34.928	ENSSPUG00000008120	RAB33B	84	34.928
ENSSPUG00000010337	RAB42	80	41.860	ENSSPUG00000002243	-	78	41.860
ENSSPUG00000010337	RAB42	81	41.954	ENSSPUG00000006349	RAB30	85	41.954
ENSSPUG00000010337	RAB42	76	44.172	ENSSPUG00000012822	RAB1A	79	44.172
ENSSPUG00000010337	RAB42	79	41.176	ENSSPUG00000002555	RAB25	83	41.176
ENSSPUG00000010337	RAB42	82	34.054	ENSSPUG00000014873	RAB5B	85	34.054
ENSSPUG00000010337	RAB42	76	43.558	ENSSPUG00000007945	RAB1B	80	43.558
ENSSPUG00000010337	RAB42	71	34.437	ENSSPUG00000005243	HRAS	85	33.742
ENSSPUG00000010337	RAB42	71	36.306	ENSSPUG00000015007	RAB29	76	36.306
ENSSPUG00000010337	RAB42	69	38.255	ENSSPUG00000005574	RAB33A	65	38.255
ENSSPUG00000010337	RAB42	98	30.047	ENSSPUG00000014551	RAB36	93	30.047
ENSSPUG00000010337	RAB42	73	40.385	ENSSPUG00000001533	-	73	40.385
ENSSPUG00000010337	RAB42	82	41.143	ENSSPUG00000002526	-	80	41.143
ENSSPUG00000010337	RAB42	82	35.135	ENSSPUG00000012950	-	85	35.135
ENSSPUG00000010337	RAB42	77	41.212	ENSSPUG00000017677	-	84	40.571
ENSSPUG00000010337	RAB42	77	41.667	ENSSPUG00000017531	RAB9B	83	41.667
ENSSPUG00000010337	RAB42	73	36.538	ENSSPUG00000001173	RAB5A	79	36.538
ENSSPUG00000010337	RAB42	82	40.909	ENSSPUG00000000617	RAB15	82	40.909
ENSSPUG00000010337	RAB42	71	35.099	ENSSPUG00000018789	-	97	31.527
ENSSPUG00000010337	RAB42	69	31.613	ENSSPUG00000005315	RASL11A	64	31.613
ENSSPUG00000010337	RAB42	72	32.692	ENSSPUG00000017750	MRAS	81	32.749
ENSSPUG00000010337	RAB42	78	38.690	ENSSPUG00000003222	RAB12	67	38.690
ENSSPUG00000010337	RAB42	96	48.780	ENSSPUG00000000552	RAB39B	96	48.780
ENSSPUG00000010337	RAB42	74	35.443	ENSSPUG00000006274	RAB23	71	35.465
ENSSPUG00000010337	RAB42	94	38.806	ENSSPUG00000013698	RAB11A	98	38.806
ENSSPUG00000010337	RAB42	97	32.701	ENSSPUG00000004262	RAB7A	97	32.701
ENSSPUG00000010337	RAB42	75	40.854	ENSSPUG00000003459	-	81	40.854
ENSSPUG00000010337	RAB42	75	39.634	ENSSPUG00000013564	-	81	39.634
ENSSPUG00000010337	RAB42	73	34.615	ENSSPUG00000000017	RAB22A	79	34.615
ENSSPUG00000010337	RAB42	85	38.674	ENSSPUG00000010896	-	95	37.561
ENSSPUG00000010337	RAB42	69	33.108	ENSSPUG00000018361	RHEB	85	33.108
ENSSPUG00000010337	RAB42	79	31.548	ENSSPUG00000008958	NRAS	94	32.222
ENSSPUG00000010337	RAB42	63	31.343	ENSSPUG00000011154	ARL3	64	31.343
ENSSPUG00000010337	RAB42	76	34.146	ENSSPUG00000003439	RAB31	83	34.146
ENSSPUG00000010337	RAB42	86	43.169	ENSSPUG00000010112	RAB2B	83	43.169
ENSSPUG00000010337	RAB42	67	33.333	ENSSPUG00000007384	RAP2B	84	33.333
ENSSPUG00000010337	RAB42	92	39.594	ENSSPUG00000016258	RAB35	95	40.099
ENSSPUG00000010337	RAB42	59	34.921	ENSSPUG00000015409	RAB17	57	34.921
ENSSPUG00000010337	RAB42	71	31.788	ENSSPUG00000003341	-	86	32.515
ENSSPUG00000010337	RAB42	97	41.148	ENSSPUG00000018803	RAB14	89	41.148
ENSSPUG00000010337	RAB42	76	32.515	ENSSPUG00000016774	RRAS2	88	32.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010337	RAB42	98	58.216	ENSANAG00000035487	-	98	58.216	Aotus_nancymaae
ENSSPUG00000010337	RAB42	97	60.185	ENSBTAG00000021525	-	98	60.185	Bos_taurus
ENSSPUG00000010337	RAB42	99	87.204	ENSCPBG00000011245	RAB42	99	87.923	Chrysemys_picta_bellii
ENSSPUG00000010337	RAB42	98	60.563	ENSCGRG00001019426	Rab42	98	60.563	Cricetulus_griseus_chok1gshd
ENSSPUG00000010337	RAB42	98	59.434	ENSDORG00000023607	Rab42	98	59.434	Dipodomys_ordii
ENSSPUG00000010337	RAB42	98	58.447	ENSFCAG00000037124	-	98	60.000	Felis_catus
ENSSPUG00000010337	RAB42	98	85.714	ENSGAGG00000004921	RAB42	100	85.990	Gopherus_agassizii
ENSSPUG00000010337	RAB42	98	59.722	ENSSTOG00000000084	-	98	59.722	Ictidomys_tridecemlineatus
ENSSPUG00000010337	RAB42	99	59.535	ENSMAUG00000020223	Rab42	99	59.535	Mesocricetus_auratus
ENSSPUG00000010337	RAB42	98	59.722	ENSMICG00000029915	-	98	60.648	Microcebus_murinus
ENSSPUG00000010337	RAB42	99	60.465	ENSMOCG00000021639	Rab42	99	60.465	Microtus_ochrogaster
ENSSPUG00000010337	RAB42	99	58.140	ENSMODG00000023873	-	97	58.140	Monodelphis_domestica
ENSSPUG00000010337	RAB42	99	60.829	ENSNGAG00000015676	Rab42	99	60.829	Nannospalax_galili
ENSSPUG00000010337	RAB42	98	59.091	ENSOGAG00000006951	-	98	60.648	Otolemur_garnettii
ENSSPUG00000010337	RAB42	96	88.293	ENSPSIG00000006831	RAB42	91	88.293	Pelodiscus_sinensis
ENSSPUG00000010337	RAB42	98	58.333	ENSPCOG00000008605	-	98	59.722	Propithecus_coquereli
ENSSPUG00000010337	RAB42	96	60.194	ENSSARG00000007565	-	99	60.194	Sorex_araneus
ENSSPUG00000010337	RAB42	98	59.174	ENSSSCG00000030432	-	98	59.174	Sus_scrofa