EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000010475 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 368978 bases
Position: chrQEPC01012326.1:28948-397925
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013672	S1	PF00575.23	2.2e-08	1	1
ENSSPUP00000013656	S1	PF00575.23	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000014580	SRBD1-202	2658	-	ENSSPUP00000013672	885 (aa)	-	-
ENSSPUT00000014561	SRBD1-201	2763	-	ENSSPUP00000013656	920 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010475	SRBD1	98	74.831	ENSG00000068784	SRBD1	89	73.991	Homo_sapiens
ENSSPUG00000010475	SRBD1	99	53.649	ENSAPOG00000005103	si:ch211-117n7.8	84	58.255	Acanthochromis_polyacanthus
ENSSPUG00000010475	SRBD1	100	72.574	ENSAMEG00000005993	SRBD1	87	78.074	Ailuropoda_melanoleuca
ENSSPUG00000010475	SRBD1	92	58.753	ENSACIG00000009875	si:ch211-117n7.8	85	59.193	Amphilophus_citrinellus
ENSSPUG00000010475	SRBD1	99	54.149	ENSAOCG00000024718	si:ch211-117n7.8	85	58.678	Amphiprion_ocellaris
ENSSPUG00000010475	SRBD1	99	55.285	ENSAPEG00000002645	si:ch211-117n7.8	88	58.796	Amphiprion_percula
ENSSPUG00000010475	SRBD1	99	55.183	ENSATEG00000010844	si:ch211-117n7.8	85	59.694	Anabas_testudineus
ENSSPUG00000010475	SRBD1	98	78.596	ENSAPLG00000006313	SRBD1	91	76.957	Anas_platyrhynchos
ENSSPUG00000010475	SRBD1	98	74.718	ENSANAG00000025573	SRBD1	91	73.136	Aotus_nancymaae
ENSSPUG00000010475	SRBD1	94	58.754	ENSACLG00000024219	si:ch211-117n7.8	83	58.968	Astatotilapia_calliptera
ENSSPUG00000010475	SRBD1	99	59.511	ENSAMXG00000004294	SRBD1	84	62.708	Astyanax_mexicanus
ENSSPUG00000010475	SRBD1	100	71.280	ENSBTAG00000007508	SRBD1	87	75.028	Bos_taurus
ENSSPUG00000010475	SRBD1	98	74.605	ENSCJAG00000000727	SRBD1	85	76.860	Callithrix_jacchus
ENSSPUG00000010475	SRBD1	100	72.660	ENSCAFG00000002554	SRBD1	86	78.404	Canis_familiaris
ENSSPUG00000010475	SRBD1	94	78.835	ENSCAFG00020026284	SRBD1	99	78.835	Canis_lupus_dingo
ENSSPUG00000010475	SRBD1	100	71.741	ENSCHIG00000016535	SRBD1	88	75.112	Capra_hircus
ENSSPUG00000010475	SRBD1	98	76.464	ENSTSYG00000012797	SRBD1	88	77.346	Carlito_syrichta
ENSSPUG00000010475	SRBD1	100	73.633	ENSCPOG00000004773	SRBD1	90	75.959	Cavia_porcellus
ENSSPUG00000010475	SRBD1	98	75.254	ENSCCAG00000025589	SRBD1	91	73.436	Cebus_capucinus
ENSSPUG00000010475	SRBD1	94	77.187	ENSCATG00000039530	SRBD1	85	77.187	Cercocebus_atys
ENSSPUG00000010475	SRBD1	100	73.825	ENSCLAG00000008623	SRBD1	88	78.671	Chinchilla_lanigera
ENSSPUG00000010475	SRBD1	94	77.187	ENSCSAG00000013350	SRBD1	85	77.187	Chlorocebus_sabaeus
ENSSPUG00000010475	SRBD1	86	88.235	ENSCHOG00000003805	SRBD1	72	88.235	Choloepus_hoffmanni
ENSSPUG00000010475	SRBD1	99	80.696	ENSCPBG00000005677	SRBD1	96	80.632	Chrysemys_picta_bellii
ENSSPUG00000010475	SRBD1	87	41.582	ENSCING00000005950	-	99	41.582	Ciona_intestinalis
ENSSPUG00000010475	SRBD1	88	42.382	ENSCSAVG00000000861	-	99	42.382	Ciona_savignyi
ENSSPUG00000010475	SRBD1	98	74.747	ENSCANG00000016307	SRBD1	89	74.049	Colobus_angolensis_palliatus
ENSSPUG00000010475	SRBD1	100	71.323	ENSCGRG00001000513	Srbd1	85	78.136	Cricetulus_griseus_chok1gshd
ENSSPUG00000010475	SRBD1	100	71.323	ENSCGRG00000002283	Srbd1	85	78.136	Cricetulus_griseus_crigri
ENSSPUG00000010475	SRBD1	99	54.873	ENSCSEG00000000856	si:ch211-117n7.8	85	58.402	Cynoglossus_semilaevis
ENSSPUG00000010475	SRBD1	98	57.948	ENSCVAG00000020212	si:ch211-117n7.8	95	56.828	Cyprinodon_variegatus
ENSSPUG00000010475	SRBD1	98	76.490	ENSDNOG00000018686	SRBD1	96	72.066	Dasypus_novemcinctus
ENSSPUG00000010475	SRBD1	94	77.897	ENSDORG00000010468	Srbd1	85	77.897	Dipodomys_ordii
ENSSPUG00000010475	SRBD1	99	33.757	FBgn0051156	CG31156	80	36.250	Drosophila_melanogaster
ENSSPUG00000010475	SRBD1	91	73.694	ENSETEG00000000739	SRBD1	82	74.364	Echinops_telfairi
ENSSPUG00000010475	SRBD1	80	48.214	ENSEBUG00000008902	si:ch211-117n7.8	96	48.214	Eptatretus_burgeri
ENSSPUG00000010475	SRBD1	94	75.590	ENSEASG00005003132	SRBD1	94	80.403	Equus_asinus_asinus
ENSSPUG00000010475	SRBD1	99	75.862	ENSECAG00000013865	SRBD1	84	78.892	Equus_caballus
ENSSPUG00000010475	SRBD1	94	62.752	ENSELUG00000012592	si:ch211-117n7.8	82	62.752	Esox_lucius
ENSSPUG00000010475	SRBD1	98	76.966	ENSFCAG00000005101	SRBD1	85	79.645	Felis_catus
ENSSPUG00000010475	SRBD1	98	77.268	ENSFALG00000012966	SRBD1	96	73.992	Ficedula_albicollis
ENSSPUG00000010475	SRBD1	100	72.970	ENSFDAG00000016670	SRBD1	86	79.496	Fukomys_damarensis
ENSSPUG00000010475	SRBD1	94	59.507	ENSFHEG00000019480	si:ch211-117n7.8	83	59.507	Fundulus_heteroclitus
ENSSPUG00000010475	SRBD1	55	55.069	ENSGMOG00000018010	-	100	55.069	Gadus_morhua
ENSSPUG00000010475	SRBD1	99	74.709	ENSGALG00000009990	SRBD1	96	74.129	Gallus_gallus
ENSSPUG00000010475	SRBD1	94	58.941	ENSGAFG00000019664	si:ch211-117n7.8	85	58.941	Gambusia_affinis
ENSSPUG00000010475	SRBD1	69	60.925	ENSGACG00000010794	si:ch211-117n7.8	100	61.981	Gasterosteus_aculeatus
ENSSPUG00000010475	SRBD1	99	80.197	ENSGAGG00000006166	SRBD1	100	85.234	Gopherus_agassizii
ENSSPUG00000010475	SRBD1	98	75.339	ENSGGOG00000005910	SRBD1	90	76.207	Gorilla_gorilla
ENSSPUG00000010475	SRBD1	94	51.852	ENSHBUG00000013207	si:ch211-117n7.8	86	52.086	Haplochromis_burtoni
ENSSPUG00000010475	SRBD1	100	72.689	ENSHGLG00000018153	-	86	79.261	Heterocephalus_glaber_female
ENSSPUG00000010475	SRBD1	100	72.901	ENSHGLG00100015183	-	86	79.380	Heterocephalus_glaber_male
ENSSPUG00000010475	SRBD1	94	62.007	ENSIPUG00000009661	srbd1	85	62.007	Ictalurus_punctatus
ENSSPUG00000010475	SRBD1	100	73.355	ENSSTOG00000005898	SRBD1	85	79.952	Ictidomys_tridecemlineatus
ENSSPUG00000010475	SRBD1	100	67.653	ENSJJAG00000022244	Srbd1	88	71.544	Jaculus_jaculus
ENSSPUG00000010475	SRBD1	99	54.735	ENSKMAG00000003473	si:ch211-117n7.8	83	59.264	Kryptolebias_marmoratus
ENSSPUG00000010475	SRBD1	98	55.567	ENSLBEG00000027518	si:ch211-117n7.8	91	55.388	Labrus_bergylta
ENSSPUG00000010475	SRBD1	94	72.156	ENSLACG00000009790	SRBD1	99	72.156	Latimeria_chalumnae
ENSSPUG00000010475	SRBD1	100	59.175	ENSLOCG00000016360	si:ch211-117n7.8	96	58.635	Lepisosteus_oculatus
ENSSPUG00000010475	SRBD1	94	77.187	ENSMFAG00000042026	SRBD1	85	77.187	Macaca_fascicularis
ENSSPUG00000010475	SRBD1	100	70.742	ENSMMUG00000003490	SRBD1	85	77.187	Macaca_mulatta
ENSSPUG00000010475	SRBD1	94	74.704	ENSMNEG00000034701	SRBD1	85	74.704	Macaca_nemestrina
ENSSPUG00000010475	SRBD1	94	77.187	ENSMLEG00000000745	SRBD1	85	77.187	Mandrillus_leucophaeus
ENSSPUG00000010475	SRBD1	99	54.703	ENSMAMG00000021921	si:ch211-117n7.8	92	54.951	Mastacembelus_armatus
ENSSPUG00000010475	SRBD1	94	58.754	ENSMZEG00005027369	si:ch211-117n7.8	83	58.968	Maylandia_zebra
ENSSPUG00000010475	SRBD1	88	75.536	ENSMGAG00000010273	SRBD1	99	75.536	Meleagris_gallopavo
ENSSPUG00000010475	SRBD1	88	75.643	ENSMAUG00000013916	Srbd1	99	74.432	Mesocricetus_auratus
ENSSPUG00000010475	SRBD1	98	76.271	ENSMICG00000007835	SRBD1	89	75.706	Microcebus_murinus
ENSSPUG00000010475	SRBD1	100	70.662	ENSMOCG00000018716	Srbd1	88	74.885	Microtus_ochrogaster
ENSSPUG00000010475	SRBD1	99	55.353	ENSMMOG00000007507	si:ch211-117n7.8	88	58.304	Mola_mola
ENSSPUG00000010475	SRBD1	91	59.564	ENSMALG00000001562	si:ch211-117n7.8	83	60.048	Monopterus_albus
ENSSPUG00000010475	SRBD1	99	73.874	MGP_CAROLIEiJ_G0021934	Srbd1	99	74.267	Mus_caroli
ENSSPUG00000010475	SRBD1	99	74.212	ENSMUSG00000024135	Srbd1	99	72.821	Mus_musculus
ENSSPUG00000010475	SRBD1	94	75.598	MGP_PahariEiJ_G0020924	Srbd1	85	75.598	Mus_pahari
ENSSPUG00000010475	SRBD1	99	73.761	MGP_SPRETEiJ_G0022850	Srbd1	88	74.942	Mus_spretus
ENSSPUG00000010475	SRBD1	98	75.000	ENSMLUG00000007039	SRBD1	88	75.858	Myotis_lucifugus
ENSSPUG00000010475	SRBD1	97	73.725	ENSNGAG00000011893	Srbd1	89	73.860	Nannospalax_galili
ENSSPUG00000010475	SRBD1	94	57.738	ENSNBRG00000012873	si:ch211-117n7.8	86	57.957	Neolamprologus_brichardi
ENSSPUG00000010475	SRBD1	98	75.169	ENSNLEG00000016877	SRBD1	89	74.605	Nomascus_leucogenys
ENSSPUG00000010475	SRBD1	96	77.252	ENSODEG00000012095	SRBD1	89	77.622	Octodon_degus
ENSSPUG00000010475	SRBD1	94	58.754	ENSONIG00000000945	si:ch211-117n7.8	99	60.024	Oreochromis_niloticus
ENSSPUG00000010475	SRBD1	100	71.924	ENSOCUG00000015385	SRBD1	89	76.531	Oryctolagus_cuniculus
ENSSPUG00000010475	SRBD1	94	55.830	ENSORLG00000004427	si:ch211-117n7.8	83	55.830	Oryzias_latipes
ENSSPUG00000010475	SRBD1	94	58.803	ENSORLG00020012792	si:ch211-117n7.8	83	58.803	Oryzias_latipes_hni
ENSSPUG00000010475	SRBD1	94	58.775	ENSORLG00015018598	si:ch211-117n7.8	83	58.775	Oryzias_latipes_hsok
ENSSPUG00000010475	SRBD1	94	57.882	ENSOMEG00000012229	si:ch211-117n7.8	84	58.235	Oryzias_melastigma
ENSSPUG00000010475	SRBD1	100	67.296	ENSOGAG00000001076	SRBD1	89	71.139	Otolemur_garnettii
ENSSPUG00000010475	SRBD1	100	67.771	ENSOARG00000005958	SRBD1	90	70.632	Ovis_aries
ENSSPUG00000010475	SRBD1	92	78.476	ENSPPAG00000038442	SRBD1	85	77.660	Pan_paniscus
ENSSPUG00000010475	SRBD1	98	76.828	ENSPPRG00000003449	SRBD1	85	79.384	Panthera_pardus
ENSSPUG00000010475	SRBD1	98	76.940	ENSPTIG00000012495	SRBD1	85	79.502	Panthera_tigris_altaica
ENSSPUG00000010475	SRBD1	92	78.356	ENSPTRG00000011889	SRBD1	85	77.541	Pan_troglodytes
ENSSPUG00000010475	SRBD1	94	77.187	ENSPANG00000008063	SRBD1	85	77.187	Papio_anubis
ENSSPUG00000010475	SRBD1	99	60.246	ENSPKIG00000021973	si:ch211-117n7.8	89	61.655	Paramormyrops_kingsleyae
ENSSPUG00000010475	SRBD1	98	82.179	ENSPSIG00000008992	SRBD1	96	78.737	Pelodiscus_sinensis
ENSSPUG00000010475	SRBD1	94	57.633	ENSPMGG00000013348	si:ch211-117n7.8	87	57.728	Periophthalmus_magnuspinnatus
ENSSPUG00000010475	SRBD1	94	75.581	ENSPEMG00000020684	Srbd1	85	75.581	Peromyscus_maniculatus_bairdii
ENSSPUG00000010475	SRBD1	94	59.181	ENSPFOG00000010650	si:ch211-117n7.8	85	59.181	Poecilia_formosa
ENSSPUG00000010475	SRBD1	99	55.769	ENSPLAG00000002141	si:ch211-117n7.8	85	58.947	Poecilia_latipinna
ENSSPUG00000010475	SRBD1	99	55.923	ENSPMEG00000018537	si:ch211-117n7.8	85	59.298	Poecilia_mexicana
ENSSPUG00000010475	SRBD1	94	59.482	ENSPREG00000003258	si:ch211-117n7.8	86	59.482	Poecilia_reticulata
ENSSPUG00000010475	SRBD1	98	69.703	ENSPPYG00000012444	SRBD1	88	69.174	Pongo_abelii
ENSSPUG00000010475	SRBD1	84	73.351	ENSPCAG00000005629	SRBD1	80	73.351	Procavia_capensis
ENSSPUG00000010475	SRBD1	100	60.251	ENSPCOG00000017669	SRBD1	84	65.171	Propithecus_coquereli
ENSSPUG00000010475	SRBD1	100	63.504	ENSPVAG00000001782	SRBD1	91	65.241	Pteropus_vampyrus
ENSSPUG00000010475	SRBD1	94	56.243	ENSPNYG00000000508	si:ch211-117n7.8	87	56.465	Pundamilia_nyererei
ENSSPUG00000010475	SRBD1	99	59.563	ENSPNAG00000013492	SRBD1	85	63.290	Pygocentrus_nattereri
ENSSPUG00000010475	SRBD1	100	69.787	ENSRNOG00000014720	Srbd1	85	76.555	Rattus_norvegicus
ENSSPUG00000010475	SRBD1	100	70.877	ENSRBIG00000033486	SRBD1	85	77.214	Rhinopithecus_bieti
ENSSPUG00000010475	SRBD1	100	70.877	ENSRROG00000041599	SRBD1	85	77.214	Rhinopithecus_roxellana
ENSSPUG00000010475	SRBD1	94	77.305	ENSSBOG00000024982	SRBD1	85	77.305	Saimiri_boliviensis_boliviensis
ENSSPUG00000010475	SRBD1	100	58.397	ENSSFOG00015001128	si:ch211-117n7.8	89	62.485	Scleropages_formosus
ENSSPUG00000010475	SRBD1	94	58.519	ENSSMAG00000018256	si:ch211-117n7.8	83	58.989	Scophthalmus_maximus
ENSSPUG00000010475	SRBD1	94	59.107	ENSSLDG00000023189	si:ch211-117n7.8	84	59.107	Seriola_lalandi_dorsalis
ENSSPUG00000010475	SRBD1	100	67.308	ENSSARG00000009740	SRBD1	89	70.311	Sorex_araneus
ENSSPUG00000010475	SRBD1	98	52.826	ENSSPAG00000008092	-	84	56.086	Stegastes_partitus
ENSSPUG00000010475	SRBD1	100	72.557	ENSSSCG00000008445	SRBD1	87	76.584	Sus_scrofa
ENSSPUG00000010475	SRBD1	92	79.782	ENSTGUG00000003878	SRBD1	99	79.782	Taeniopygia_guttata
ENSSPUG00000010475	SRBD1	94	58.235	ENSTRUG00000007080	si:ch211-117n7.8	94	58.706	Takifugu_rubripes
ENSSPUG00000010475	SRBD1	98	55.011	ENSTNIG00000007464	si:ch211-117n7.8	85	56.286	Tetraodon_nigroviridis
ENSSPUG00000010475	SRBD1	81	91.489	ENSTBEG00000004556	SRBD1	74	91.489	Tupaia_belangeri
ENSSPUG00000010475	SRBD1	92	76.410	ENSTTRG00000011871	SRBD1	83	76.410	Tursiops_truncatus
ENSSPUG00000010475	SRBD1	99	76.063	ENSUAMG00000008126	SRBD1	97	73.188	Ursus_americanus
ENSSPUG00000010475	SRBD1	99	75.951	ENSUMAG00000012902	SRBD1	86	77.778	Ursus_maritimus
ENSSPUG00000010475	SRBD1	98	76.271	ENSVPAG00000006825	SRBD1	93	78.867	Vicugna_pacos
ENSSPUG00000010475	SRBD1	98	76.617	ENSVVUG00000005389	SRBD1	89	76.018	Vulpes_vulpes
ENSSPUG00000010475	SRBD1	100	53.908	ENSXETG00000002760	srbd1	90	55.914	Xenopus_tropicalis
ENSSPUG00000010475	SRBD1	94	58.596	ENSXMAG00000016861	si:ch211-117n7.8	85	58.596	Xiphophorus_maculatus