EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010525 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 26515 bases
Position: chrQEPC01001667.1:2276961-2303475
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000013807	Ago_hook	PF10427.9	9e-08	1	1
ENSSPUP00000013814	Ago_hook	PF10427.9	9.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000014724	TNRC6A-201	5268	-	ENSSPUP00000013807	1755 (aa)	-	-
ENSSPUT00000014731	TNRC6A-202	5121	-	ENSSPUP00000013814	1706 (aa)	-	-
ENSSPUT00000014756	TNRC6A-203	1848	-	ENSSPUP00000013835	615 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010525	TNRC6A	78	45.224	ENSSPUG00000007341	TNRC6C	89	45.504
ENSSPUG00000010525	TNRC6A	98	37.396	ENSSPUG00000010801	TNRC6B	96	43.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010525	TNRC6A	100	78.835	ENSG00000090905	TNRC6A	100	90.000	Homo_sapiens
ENSSPUG00000010525	TNRC6A	100	78.779	ENSAMEG00000009333	TNRC6A	92	78.779	Ailuropoda_melanoleuca
ENSSPUG00000010525	TNRC6A	100	85.867	ENSAPLG00000009978	TNRC6A	94	86.203	Anas_platyrhynchos
ENSSPUG00000010525	TNRC6A	99	57.112	ENSACAG00000011857	TNRC6A	90	58.534	Anolis_carolinensis
ENSSPUG00000010525	TNRC6A	100	78.555	ENSANAG00000025252	TNRC6A	91	78.052	Aotus_nancymaae
ENSSPUG00000010525	TNRC6A	100	57.608	ENSAMXG00000019919	tnrc6a	100	57.226	Astyanax_mexicanus
ENSSPUG00000010525	TNRC6A	99	78.783	ENSBTAG00000017999	TNRC6A	92	78.319	Bos_taurus
ENSSPUG00000010525	TNRC6A	100	78.555	ENSCJAG00000020677	TNRC6A	90	78.052	Callithrix_jacchus
ENSSPUG00000010525	TNRC6A	100	79.059	ENSCAFG00000017531	TNRC6A	91	78.756	Canis_familiaris
ENSSPUG00000010525	TNRC6A	100	77.884	ENSCAFG00020021160	TNRC6A	93	77.490	Canis_lupus_dingo
ENSSPUG00000010525	TNRC6A	100	77.893	ENSCHIG00000019448	TNRC6A	97	77.330	Capra_hircus
ENSSPUG00000010525	TNRC6A	100	78.275	ENSTSYG00000012711	TNRC6A	91	78.275	Carlito_syrichta
ENSSPUG00000010525	TNRC6A	100	78.008	ENSCPOG00000036684	TNRC6A	90	77.938	Cavia_porcellus
ENSSPUG00000010525	TNRC6A	100	78.723	ENSCCAG00000033664	TNRC6A	91	78.219	Cebus_capucinus
ENSSPUG00000010525	TNRC6A	100	78.584	ENSCATG00000019284	TNRC6A	90	78.584	Cercocebus_atys
ENSSPUG00000010525	TNRC6A	99	75.864	ENSCLAG00000010217	TNRC6A	90	76.152	Chinchilla_lanigera
ENSSPUG00000010525	TNRC6A	100	78.835	ENSCSAG00000006561	TNRC6A	90	78.835	Chlorocebus_sabaeus
ENSSPUG00000010525	TNRC6A	95	75.152	ENSCHOG00000009374	TNRC6A	85	74.764	Choloepus_hoffmanni
ENSSPUG00000010525	TNRC6A	100	86.954	ENSCPBG00000001881	TNRC6A	99	86.888	Chrysemys_picta_bellii
ENSSPUG00000010525	TNRC6A	100	78.891	ENSCANG00000041549	TNRC6A	90	78.891	Colobus_angolensis_palliatus
ENSSPUG00000010525	TNRC6A	100	77.871	ENSCGRG00001015021	Tnrc6a	93	77.815	Cricetulus_griseus_chok1gshd
ENSSPUG00000010525	TNRC6A	100	77.247	ENSCGRG00000013351	Tnrc6a	90	77.189	Cricetulus_griseus_crigri
ENSSPUG00000010525	TNRC6A	100	57.862	ENSDARG00000079688	tnrc6a	99	58.357	Danio_rerio
ENSSPUG00000010525	TNRC6A	100	77.194	ENSDNOG00000013989	TNRC6A	92	77.194	Dasypus_novemcinctus
ENSSPUG00000010525	TNRC6A	100	69.955	ENSETEG00000014658	TNRC6A	92	69.843	Echinops_telfairi
ENSSPUG00000010525	TNRC6A	100	78.344	ENSEASG00005017693	TNRC6A	97	78.456	Equus_asinus_asinus
ENSSPUG00000010525	TNRC6A	100	78.829	ENSECAG00000025056	TNRC6A	97	78.456	Equus_caballus
ENSSPUG00000010525	TNRC6A	99	73.404	ENSEEUG00000004530	TNRC6A	91	73.363	Erinaceus_europaeus
ENSSPUG00000010525	TNRC6A	100	79.167	ENSFCAG00000025236	TNRC6A	92	78.288	Felis_catus
ENSSPUG00000010525	TNRC6A	100	85.730	ENSFALG00000003757	TNRC6A	90	85.900	Ficedula_albicollis
ENSSPUG00000010525	TNRC6A	100	86.263	ENSGALG00000006068	TNRC6A	99	86.612	Gallus_gallus
ENSSPUG00000010525	TNRC6A	100	86.245	ENSGAGG00000023209	TNRC6A	99	86.129	Gopherus_agassizii
ENSSPUG00000010525	TNRC6A	100	78.779	ENSGGOG00000005137	TNRC6A	91	78.779	Gorilla_gorilla
ENSSPUG00000010525	TNRC6A	100	77.304	ENSHGLG00000012474	-	90	77.247	Heterocephalus_glaber_female
ENSSPUG00000010525	TNRC6A	100	62.197	ENSHGLG00000007368	-	89	62.023	Heterocephalus_glaber_female
ENSSPUG00000010525	TNRC6A	99	77.252	ENSHGLG00100012496	-	91	77.194	Heterocephalus_glaber_male
ENSSPUG00000010525	TNRC6A	100	79.380	ENSSTOG00000023394	TNRC6A	89	79.211	Ictidomys_tridecemlineatus
ENSSPUG00000010525	TNRC6A	99	71.938	ENSLACG00000006277	TNRC6A	94	71.993	Latimeria_chalumnae
ENSSPUG00000010525	TNRC6A	100	82.819	ENSLOCG00000005517	tnrc6a	84	82.819	Lepisosteus_oculatus
ENSSPUG00000010525	TNRC6A	100	78.423	ENSLAFG00000004209	TNRC6A	93	78.251	Loxodonta_africana
ENSSPUG00000010525	TNRC6A	100	78.300	ENSMFAG00000003824	TNRC6A	91	78.300	Macaca_fascicularis
ENSSPUG00000010525	TNRC6A	100	79.003	ENSMMUG00000020428	TNRC6A	90	79.003	Macaca_mulatta
ENSSPUG00000010525	TNRC6A	100	79.115	ENSMNEG00000034854	TNRC6A	91	78.244	Macaca_nemestrina
ENSSPUG00000010525	TNRC6A	100	78.132	ENSMLEG00000042737	TNRC6A	89	78.132	Mandrillus_leucophaeus
ENSSPUG00000010525	TNRC6A	100	85.218	ENSMGAG00000006455	TNRC6A	90	85.554	Meleagris_gallopavo
ENSSPUG00000010525	TNRC6A	100	77.707	ENSMAUG00000012750	Tnrc6a	90	77.823	Mesocricetus_auratus
ENSSPUG00000010525	TNRC6A	100	78.835	ENSMICG00000030685	TNRC6A	91	78.835	Microcebus_murinus
ENSSPUG00000010525	TNRC6A	100	77.925	ENSMOCG00000000152	Tnrc6a	90	77.752	Microtus_ochrogaster
ENSSPUG00000010525	TNRC6A	100	80.913	ENSMODG00000016348	TNRC6A	89	80.968	Monodelphis_domestica
ENSSPUG00000010525	TNRC6A	100	77.464	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	79.025	Mus_caroli
ENSSPUG00000010525	TNRC6A	100	77.695	ENSMUSG00000052707	Tnrc6a	99	79.308	Mus_musculus
ENSSPUG00000010525	TNRC6A	100	77.419	MGP_PahariEiJ_G0013635	Tnrc6a	100	79.096	Mus_pahari
ENSSPUG00000010525	TNRC6A	100	77.691	MGP_SPRETEiJ_G0031539	Tnrc6a	100	78.955	Mus_spretus
ENSSPUG00000010525	TNRC6A	99	71.429	ENSMPUG00000012324	TNRC6A	93	71.254	Mustela_putorius_furo
ENSSPUG00000010525	TNRC6A	99	77.255	ENSMLUG00000002701	TNRC6A	93	77.255	Myotis_lucifugus
ENSSPUG00000010525	TNRC6A	100	77.490	ENSNGAG00000020702	Tnrc6a	90	77.432	Nannospalax_galili
ENSSPUG00000010525	TNRC6A	100	77.241	ENSNLEG00000011851	TNRC6A	91	77.184	Nomascus_leucogenys
ENSSPUG00000010525	TNRC6A	75	84.368	ENSMEUG00000015959	-	68	84.146	Notamacropus_eugenii
ENSSPUG00000010525	TNRC6A	95	88.848	ENSOPRG00000005819	TNRC6A	85	88.848	Ochotona_princeps
ENSSPUG00000010525	TNRC6A	99	74.799	ENSODEG00000012802	TNRC6A	91	75.259	Octodon_degus
ENSSPUG00000010525	TNRC6A	97	82.298	ENSOANG00000007672	TNRC6A	100	82.298	Ornithorhynchus_anatinus
ENSSPUG00000010525	TNRC6A	100	76.385	ENSOCUG00000004325	TNRC6A	94	76.385	Oryctolagus_cuniculus
ENSSPUG00000010525	TNRC6A	100	79.027	ENSOGAG00000006666	TNRC6A	91	79.027	Otolemur_garnettii
ENSSPUG00000010525	TNRC6A	100	78.237	ENSOARG00000017950	TNRC6A	98	77.618	Ovis_aries
ENSSPUG00000010525	TNRC6A	100	78.835	ENSPPAG00000028379	TNRC6A	91	78.835	Pan_paniscus
ENSSPUG00000010525	TNRC6A	100	78.735	ENSPPRG00000005861	TNRC6A	90	78.344	Panthera_pardus
ENSSPUG00000010525	TNRC6A	100	78.791	ENSPTIG00000006346	TNRC6A	90	78.400	Panthera_tigris_altaica
ENSSPUG00000010525	TNRC6A	100	78.891	ENSPTRG00000007898	TNRC6A	91	78.891	Pan_troglodytes
ENSSPUG00000010525	TNRC6A	100	76.372	ENSPANG00000018523	TNRC6A	91	75.895	Papio_anubis
ENSSPUG00000010525	TNRC6A	96	76.847	ENSPKIG00000012859	tnrc6a	99	79.570	Paramormyrops_kingsleyae
ENSSPUG00000010525	TNRC6A	85	80.610	ENSPSIG00000003965	TNRC6A	100	80.678	Pelodiscus_sinensis
ENSSPUG00000010525	TNRC6A	100	77.970	ENSPEMG00000016318	Tnrc6a	90	77.579	Peromyscus_maniculatus_bairdii
ENSSPUG00000010525	TNRC6A	100	82.383	ENSPCIG00000012106	TNRC6A	94	82.326	Phascolarctos_cinereus
ENSSPUG00000010525	TNRC6A	100	78.499	ENSPPYG00000007202	TNRC6A	90	78.219	Pongo_abelii
ENSSPUG00000010525	TNRC6A	94	80.612	ENSPCAG00000008260	TNRC6A	84	80.612	Procavia_capensis
ENSSPUG00000010525	TNRC6A	100	76.596	ENSPCOG00000010134	TNRC6A	90	76.428	Propithecus_coquereli
ENSSPUG00000010525	TNRC6A	88	63.369	ENSPVAG00000012066	TNRC6A	90	63.520	Pteropus_vampyrus
ENSSPUG00000010525	TNRC6A	100	77.477	ENSRNOG00000024737	Tnrc6a	90	77.459	Rattus_norvegicus
ENSSPUG00000010525	TNRC6A	100	78.779	ENSRBIG00000014222	TNRC6A	91	78.779	Rhinopithecus_bieti
ENSSPUG00000010525	TNRC6A	100	78.835	ENSRROG00000032360	TNRC6A	90	78.835	Rhinopithecus_roxellana
ENSSPUG00000010525	TNRC6A	100	78.555	ENSSBOG00000036197	TNRC6A	100	78.999	Saimiri_boliviensis_boliviensis
ENSSPUG00000010525	TNRC6A	100	80.435	ENSSHAG00000008811	TNRC6A	99	81.007	Sarcophilus_harrisii
ENSSPUG00000010525	TNRC6A	100	59.432	ENSSFOG00015008920	tnrc6a	100	60.967	Scleropages_formosus
ENSSPUG00000010525	TNRC6A	72	69.620	ENSSARG00000002479	TNRC6A	81	66.123	Sorex_araneus
ENSSPUG00000010525	TNRC6A	100	79.490	ENSSSCG00000038870	TNRC6A	100	79.769	Sus_scrofa
ENSSPUG00000010525	TNRC6A	100	84.527	ENSTGUG00000006142	TNRC6A	91	84.527	Taeniopygia_guttata
ENSSPUG00000010525	TNRC6A	100	75.980	ENSTBEG00000014965	TNRC6A	92	75.812	Tupaia_belangeri
ENSSPUG00000010525	TNRC6A	93	82.885	ENSTTRG00000002008	TNRC6A	83	82.885	Tursiops_truncatus
ENSSPUG00000010525	TNRC6A	79	75.650	ENSUAMG00000006656	-	85	75.434	Ursus_americanus
ENSSPUG00000010525	TNRC6A	100	78.835	ENSUMAG00000008274	TNRC6A	100	79.521	Ursus_maritimus
ENSSPUG00000010525	TNRC6A	100	79.549	ENSVVUG00000005380	TNRC6A	96	79.059	Vulpes_vulpes
ENSSPUG00000010525	TNRC6A	99	67.225	ENSXETG00000030437	TNRC6A	95	67.188	Xenopus_tropicalis